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PowerShell requires explicit shell and env support in Spack.
This is due to the distinct differences in shell interactions between
cmd and pwsh. Add a doskey in pwsh piping 'spack' commands to a
powershell script similar to the sh function 'spack'. Add
support for PowerShell-specific shell interactions from Spack
(set/unset shell variables).
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* py-ruamel-yaml: add 0.17.32 and py-ruamel-yaml-clib: add 0.2.7
* Update var/spack/repos/builtin/packages/py-ruamel-yaml/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Fix style
* Fix python dependency
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Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* HDF5: is_enabled helper (ON)
Slightly generalize the `is_enabled` helper in the HDF5 package.
`ON` is the most typical CMake bool option passed, besides many
other possible `true` values, and should be included as a possible
check to the config.
* Simplify
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Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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* py-rich: add 13.4.2, py-markdown-it-py: add 3.0.0, py-mdurl: add new package
* Fix style
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(when +cuda, and on version 4.0.00 and up)
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* py-lightning: add v2.0.4, drop +extra
* Update dependencies
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Co-authored-by: eugeneswalker <38933153+eugeneswalker@users.noreply.github.com>
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* py-genshi: convert to new stand-alone test process
* py-genshi: add run as py-setuptools deptype; remove test_testsuite comment
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* py-bx-python: add 0.9.0
* remove dependency
* Remove python upper bound
* Clarify dependency requirements
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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This reverts commit 66f75407d136c0c06ed01774d5815728afba35ca.
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Fixed the cached CMake package so that the build_type field is saved
in the cached configuration file.
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* Support hardlinks/junctions on Windows systems without developer
mode enabled
* Generally, use of llnl.util.symlink.symlink is preferred over
os.symlink since it handles this automatically
* Generally an error is now reported if a user attempts to create a
symlink to a file that does not exist (this was previously allowed
on Linux/Mac).
* One exception to this: when Spack installs files from the source
into their final prefix, dangling symlinks are allowed (on
Linux/Mac - Windows does not allow this in any circumstance).
The intent behind this is to avoid generating failures for
installations on Linux/Mac that were succeeding before.
* Because Windows is strict about forbidding dangling symlinks,
`traverse_tree` has been updated to skip creating symlinks if they
would point to a file that is ignored. This check is not
transitive (i.e., a symlink to a symlink to an ignored file would
not be caught appropriately)
* Relocate function: resolve_link_target_relative_to_the_link
(this is not otherwise modified)
Co-authored-by: jamessmillie <smillie@txcorp.com>
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Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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Update list of excluded variables in `from_sourcing_file` function to
cover all variables specific to Environment Modules or Lmod. Add
specifically variables relative to the definition of `module()`, `ml()`
and `_module_raw()` Bash functions.
Fixes #13504
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* Add new versions of Qthreads
* Add version URLs explicitly as it has recently changed
* Use function to extrapolate version URL for older versions
* Fix url formatter
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precision option (#37736)
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llvm @13-15 is required for ispc, but fails to build with GCC 13.
14.0.6 and 15.0.7 built successfully with upstream patch, 13.0.1
still fails. Thus upstream patch is applied to 14 and 15 only.
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* netcdf-c: fix building on macOS
* netcdf-c: add patch fixing multi-threaded HDF5 calls
* netcdf-c: update patch url
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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* py-python-lzo: add 1.15
* Update package.py
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Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
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Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
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Update `env.set` command and underlying `SetEnv` object to add the `raw`
boolean attribute. `raw` is optional and set to False by default. When
set to True, value format is skipped for object when generating
environment modifications.
With this change it is now possible to define environment variable
whose value contains variable reference syntax (like `{foo}` or `{}`)
that should be set as-is.
Fixes #29578
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By default, `find_package(Python)` searches from highest version to lowest version, identifying the highest version that satisfies the requirements. This means that `/usr/bin/python3.11` will be found before `$(spack location -i python)/bin/python3.10`, even when other packages have been built with the `python` in spack.
This ensures that the `python` dependency is explicitly the `python` version that is used.
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Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
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