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2016-07-18Better error messages for `spack reindex`.Todd Gamblin2-7/+17
2016-07-17Merge pull request #1188 from epfl-scitas/packages/py-numpyTodd Gamblin1-2/+2
RPATH for blas in py numpy
2016-07-17Merge pull request #1252 from hartzell/patch-5Todd Gamblin1-3/+4
Fix format of explanation of an example & question
2016-07-17Merge pull request #1258 from eschnett/eschnett/openmpi-2.0.0Todd Gamblin1-1/+4
Update to OpenMPI 2.0.0
2016-07-17Merge pull request #1240 from epfl-scitas/truncated_documentationTodd Gamblin1-8/+8
doc : fixes #1239
2016-07-17docs : substituted None with empty cellalalazo1-3/+3
2016-07-15Correct indentationErik Schnetter1-1/+1
2016-07-15Merge pull request #1261 from adamjstewart/features/create-deptypebecker331-3/+3
Automatically add deptype to newly created packages
2016-07-15Automatically add deptype to newly created packagesAdam J. Stewart1-3/+3
2016-07-15Merge pull request #1246 from suraia/improve-shell-integrationbecker331-8/+20
Improve shell integration.
2016-07-15Merge pull request #1168 from epfl-scitas/packages/gtsbecker331-0/+53
gts : added package
2016-07-15Merge pull request #1177 from epfl-scitas/packages/swiftsim_and_metisbecker331-0/+1
swiftsim : fixed configuration for metis
2016-07-15Merge pull request #1187 from paulhopkins/bugfix/python-updatesbecker331-3/+22
Bugfix/python updates
2016-07-15Merge pull request #1227 from glennpj/ggvisbecker335-0/+237
New package - r-ggvis
2016-07-15Merge pull request #1259 from adamjstewart/fixes/run-flake8becker331-1/+2
Updates to run-flake8 test
2016-07-15Merge pull request #1254 from mdevlin1/features/hmmerbecker331-0/+76
add HMMER package
2016-07-15Merge pull request #1251 from hartzell/patch-4becker331-1/+1
Minor typo fix
2016-07-15Updates to run-flake8 testAdam J. Stewart1-1/+2
2016-07-15Update to OpenMPI 2.0.0Erik Schnetter1-1/+4
2016-07-15add HMMER packageMitchell Devlin1-0/+76
2016-07-15Merge pull request #378 from mathstuf/dep-typesTodd Gamblin226-507/+1053
dependency types
2016-07-14Fix package name bug.Todd Gamblin1-1/+1
2016-07-14added py-pydatalog packageGregory Becker1-0/+38
2016-07-14Add GNU Prolog package.Todd Gamblin1-0/+41
2016-07-14spec: assign namespaces to the full dependency DAGBen Boeckel1-1/+1
2016-07-14package: mention the package that is no concreteBen Boeckel1-1/+1
2016-07-14foam-extend, sundials: add cmake as a builddepBen Boeckel2-0/+2
The sundials doesn't use CMake directly, but it is referenced in the patch step. I suspect it calls CMake somewhere else in its build system.
2016-07-14cantera: use nolink for python module dependenciesBen Boeckel1-4/+4
Unsure about this, but this is probably true.
2016-07-14lua: bring in run deps of build and run depsBen Boeckel1-1/+1
2016-07-14R: look only at run dependencies of build and run depsBen Boeckel1-1/+1
2016-07-14python: setup the dependent environment properlyBen Boeckel1-1/+1
We want the run dependencies of all build and run dependencies of the current package.
2016-07-14msgpack-c: add missing dependency on cmakeBen Boeckel1-0/+2
2016-07-14py-matplotlib: require py-setuptools to buildBen Boeckel1-0/+1
2016-07-14deptypes: mark deptypes in packagesBen Boeckel183-305/+329
2016-07-14spack: introduce dependency typesBen Boeckel34-182/+697
deptypes: allow for different queries For things like Python modules, they are required for the build and runtime, but rather than adding a new parameter for what to query across the dependency DAG, just expose the recursive query parameter.
2016-07-14test: use file:// url for git reposBen Boeckel1-2/+2
2016-07-14darwin: explicitly use the 'when=' kwargBen Boeckel3-3/+3
2016-07-14doxygen: add missing importBen Boeckel1-0/+2
2016-07-14test/stage: use os.path.realpath on the test pathsBen Boeckel1-2/+2
When var/spack/stage is a symlink, the tests fail since realpath is used on the resulting path, but not the original path, so the string compare fails. Smarter path testing might be a better option.
2016-07-14directory_layout: fix error path when specs conflictBen Boeckel1-2/+2
2016-07-14typos: fix some typosBen Boeckel2-4/+4
2016-07-14Support --dependencies for recursively loading modules.Michael Kuhn1-1/+1
2016-07-14Remove extraneous letter 'p'George Hartzell1-1/+1
It got in there by mistake, now it's gone.
2016-07-14Fix format of explanation of an example & questionGeorge Hartzell1-3/+4
This list was not formatted correctly on [the ReadTheDocs site](http://software.llnl.gov/spack/basic_usage.html#specs-dependencies). I'm not a .rst expert, but I think that it was improperly indented. The example includes an `arch=...` string but *arch* is not listed in the valid compiler flag specifiers or architecture specifiers. Should it be, or is it considered an "optional variant specifier?
2016-07-14Minor typo fixGeorge Hartzell1-2/+2
the packages that depends on => the packages that depend on
2016-07-13Improve shell integration.Michael Kuhn1-8/+20
Enable sh emulation for Zsh and allow loading modules recursively.
2016-07-13Merge pull request #1231 from adamjstewart/fixes/bzip2Todd Gamblin1-22/+27
Patch both bzip2 makefiles
2016-07-13Flake8Adam J. Stewart1-19/+19
2016-07-13Filter both makefiles to allow intel to build bzip2Adam J. Stewart1-3/+8
2016-07-13doc : fixes #1239alalazo1-8/+8
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