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2018-09-24intel: add 2019.0 (#9328)Denis Davydov5-0/+9
2018-09-24travis: require sudo in an attempt to avoid build timeouts (#9327)Todd Gamblin2-2/+13
- Many container builds are timing out frequently during Spack tests in Travis CI. - Travis recommends to try `sudo: required` to see whether this is an infrastructure issue or something else. - added `sudo: required` to all Linux builds. - added --verbose to `spack test` invocation so that we can see more easily what tests it's timing out on. Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2018-09-24macos: add mojave (#9322)Denis Davydov1-1/+2
2018-09-24New package: r-animation (#9314)Strahinja Trecakov1-0/+41
* adding r-animation package
2018-09-24new versions of r-dplyr,r-plogr,r-rlang (#9313)Strahinja Trecakov3-6/+12
2018-09-24Spack package for PICSARlite (#9288)rvinaybharadwaj1-0/+138
2018-09-21Spack package for Ember (#9292)rvinaybharadwaj1-0/+102
2018-09-20Add newer versions of spdlog (#9290)Andrew Gaspar1-0/+10
2018-09-20Added llvm 7.0.0 (#9296)sknigh1-0/+16
2018-09-20Catch2: 2.3.0+ (#9300)Axel Huebl2-1/+4
* Catch2: 2.3.0+ Add the latest two releases of Catch2. In 2.3.0+, the include changed to a future-proof `<catch2/catch.hpp>` path which dependent projects will break upon. * openPMD-api: Catch2 2.3.0+ openPMD-api just updated to use the new, future-proof Catch2 headers `<catch2/catch.hpp>`.
2018-09-19report error if failed process captures stderr (#9293)scheibelp1-6/+16
When a Spack Executable was configured to capture stderr and the process failed, the error messages of the process were discarded. This made it difficult to understand why the process failed. The exception is now updated to include the stderr of the process when the Executable captures stderr.
2018-09-19sw4lite: add v1.1 (#9289)Christoph Junghans1-0/+1
2018-09-18Fix version parsing for cistem package (#9260)Adam J. Stewart3-1/+4
Adds 'code' to the list of suffixes that are excluded from version parsing of URLs, such that if a URL contains the string 'cistem-1.0.0-beta-source-code', a version X will substitute in to produce a URL with cistem-X-source-code ('source' was already excluded). The 'cistem' package version is updated to make use of this (and fix a fetching bug with the cistem package). A unit test is added to check this parsing case.
2018-09-18sst-macro package: add versions and variants (#9271)sknigh1-16/+55
Added variants for: mpi support, clang skeletonizer, building as static and/or shared, and more.
2018-09-18hadoop package: fix url and checksum (#9263)Geoffrey Lentner1-2/+2
2018-09-18apple-libunwind: update path to library (#9265)Geoffrey Oxberry1-3/+17
2018-09-18new package: rclone (#9268)Levi Baber1-0/+42
2018-09-18libhio: add patch for 1.4.1.2 release (#9270)Howard Pritchard2-0/+33
Turns out that there was a configury problem in libhio which caused issues building the package on non-cray systems, aka when using mpicc and friends. Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
2018-09-18xsbench: added v18 (#9269)Christoph Junghans1-0/+1
2018-09-18Packages/candle benchmarks (#9266)Christoph Junghans2-2/+3
* candle-benchmarks: added v0.1 * ecp-proxy-apps: v1.0 now depends on candle-benchmarks@0.0
2018-09-16star - added latest versions with shasum (#9257)Douglas Duckworth1-5/+12
* star - added latest versions with shasum * star - added latest versions with shasum
2018-09-16coinhsl: add @2015.06.23, explain versions, SHA256 (#9258)Geoffrey Oxberry1-2/+19
2018-09-15Update rdma-core : new version and conflict with intel (#9255)Pramod Kumbhar1-2/+4
* Update rdma-core : new version and conflict with intel * address review comments
2018-09-15changed to new install_tree formalism (#9181)toffer931-0/+53
2018-09-15gdb: add lzma support by default (#9247)Matthias Diener1-1/+1
This is required at least on RedHat/Fedora. Many (most?) other people distribute gdb with this support enabled: http://tomszilagyi.github.io/2018/03/Remote-gdb-with-stl-pp https://bugzilla.redhat.com/show_bug.cgi?id=1596490
2018-09-14breakdancer: fix several issues (#9251)Levi Baber1-4/+29
* add perl dependencies * put bam2cfg in path * fix perl dir
2018-09-14Feature/py picrust (#9184)Miles Perry1-1/+1
2018-09-14rdma-core: Fix missing pkg-config dependency (#9195)Michael Kuhn1-0/+1
rdma-core requires pkg-config, otherwise libnl can not be found.
2018-09-14jdk: added 10.0.2_13 (#9203)Justin Stanley1-0/+2
2018-09-14Updating amrvis to allow building with profiling support. (#9204)Jon Rood1-5/+28
* Updating amrvis to allow building with profiling support. * Setting MPI default to true.
2018-09-14Update py-libensemble package to v0.3.0 (#9210)Stephen Hudson1-1/+2
2018-09-14add eigen@3.3.5 (#9212)Stephen McDowell1-0/+1
2018-09-14hypre: patch +shared@2.13.0: on darwin (#9220)Geoffrey Oxberry3-1/+1143
2018-09-14plumed: updating plumed to latest version (#9227)snehring1-0/+1
2018-09-14Build Python 3.7 with external libffi. (#9245)Sergey Kosukhin4-6/+45
2018-09-14add opencv@3.4.3 (#9213)Stephen McDowell1-0/+1
2018-09-14patch flann // gcc // cmake@3.11+ (#9214)Stephen McDowell2-0/+27
See: https://github.com/mariusmuja/flann/issues/369
2018-09-14Charmpp: rename charm to charmpp according to ++ conventions (#9216)Abhinav Bhatele5-3/+3
* Charmpp: rename charm to charmpp according to ++ conventions * modify packages that depend on charmpp
2018-09-14py-spectra: new version (#9224)Levi Baber1-0/+2
2018-09-14OpenCoarrays: update v2.2.0 (#9215)Mario Melara2-1/+32
This commit adds a patch that prevents the package from hanging. The package would hang because CMakeLists would look for a system MPI. This patch changes the behavior.
2018-09-14miniamr: added v1.4.1 (#9225)Christoph Junghans1-0/+1
2018-09-14py-h5py: add version 2.8.0 (#9231)Adam J. Stewart1-9/+14
2018-09-14portcullis: new package starting at 1.1.2 (#9218)Justin Stanley1-0/+73
2018-09-14miniQMC: add newer releases and ecp-proxy-app tag (#9233)Abhinav Bhatele1-1/+3
2018-09-14ipopt: add debug variant (#9223)Geoffrey Oxberry1-0/+10
2018-09-14hypre: add debug variant (#9222)Geoffrey Oxberry1-0/+7
2018-09-14py-multiqc: needs newer py-spectra (#9226)Levi Baber1-1/+4
2018-09-14py-networkx: new version (#9241)Levi Baber1-2/+5
2018-09-14py-decorator: new version (#9240)Levi Baber1-0/+1
2018-09-14py-markdown: fix url and hashes (#9235)Levi Baber1-12/+14