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2021-04-20Removed unnecessary code to put cuda_arch in DiHydrogen (#23158)Brian Van Essen2-14/+4
These were deprecated when the custom cuda_arch list was removed. Also fixed up the Aluminum dependencies for Hydrogen and DiHydrogen. Turns out that Aluminum v0.6.0 didn't have a correct version in CMake and thus the interaction with older versions of Hydrogen and DiHydrogen needed to be corrected.
2021-04-20libsigsegv: update to version 2.13. (#23155)Mansour Moufid1-1/+2
2021-04-20Fixing typo tty.fail -> tty.die and monitor docstrings (#23152)Vanessasaurus1-37/+90
This isn't a significant issue, but I noticed that the docstring incorrectly references "tty.fail" and I wanted to quickly fix it to reflect the correct command, tty.die. I also wanted to fix the docstrings to not be large clumps, to what @tgamblin suggested after I wrote this - having one line at the top that is a quick summary, and more verbose after that.
2021-04-20Use xz instead of lzma. XZ utils provides lzma dev files (#23144)Ethan Stam1-1/+1
2021-04-20redset: add versions 0.0.5 and 0.0.4 (#22977)Cameron Stanavige1-2/+4
Also update the url and hash of v0.0.3.
2021-04-20shuffile: add version 0.0.4 (#22976)Cameron Stanavige1-3/+4
Also update the url and hash for v0.0.3.
2021-04-20New package: pmemkvKoyamaSohei1-0/+88
2021-04-20Package libsecret: turn off gobj variant by default (#23070)Sinan1-1/+1
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2021-04-20emacs package: add version @master (#23075)miheer vaidya1-0/+6
2021-04-20argobots: support new variants (#23133)Shintaro Iwasaki1-1/+25
2021-04-20oracle-instant-client package: add dependency on libaio (#23080)iarspider1-0/+2
2021-04-20etsf-io: added missing `mpi` variant (#23083)Massimiliano Culpo1-2/+2
The variant was mentioned in a depends_on directive, but never declared
2021-04-20angsd: fix typo in variants (#23081)Massimiliano Culpo1-8/+9
2021-04-20geopm: remove reference to nonexistent variant (#23084)Massimiliano Culpo1-2/+1
2021-04-20New package: r-mcmcpack (#23139)Glenn Johnson1-0/+30
2021-04-20New package: r-missmethyl (#23140)Glenn Johnson1-0/+48
2021-04-20New package: r-projpred (#23141)Glenn Johnson1-0/+39
2021-04-20lammps: fix typo in variant name (#23085)Massimiliano Culpo1-5/+4
In two conflicts we used +adios instead of +user-adios
2021-04-20Set the minimum version of NCCL for aluminum (#23135)Brian Van Essen1-1/+1
2021-04-20r-experimenthub: new package (#23095)Glenn Johnson1-0/+29
2021-04-20add py-setuptools dependency (#23120)Ryan Marcellino1-0/+1
2021-04-20New package: py-pymumps (#19526)Tom Payerle2-0/+61
* New package: py-pymumps Python bindings for MUMPS, a parallel sparse direct solver * py-pymumps: fixing flake issues * py-pymumps: fix dependency types Following suggestion of @adamjstewart * Update var/spack/repos/builtin/packages/py-pymumps/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pymumps/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pymumps/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pymumps/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pymumps/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pymumps/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-04-20json-c: added two versions and converted to cmake package (#23129)Matthieu Dorier1-3/+18
2021-04-20r-bayesplot: new package (#23091)Glenn Johnson1-0/+34
2021-04-20r-illuminahumanmethylation450kmanifest: new package (#23100)Glenn Johnson1-0/+18
2021-04-20r-champdata: new package (#23093)Glenn Johnson1-0/+21
2021-04-20r-compquadform: new package (#23094)Glenn Johnson1-0/+18
2021-04-20r-illumina450probevariants-db: new package (#23099)Glenn Johnson1-0/+20
2021-04-20r-fastica: new package (#23096)Glenn Johnson1-0/+19
2021-04-20r-gamm4: new package (#23097)Glenn Johnson1-0/+22
2021-04-20r-globaltest: new package (#23098)Glenn Johnson1-0/+26
2021-04-20r-illuminahumanmethylationepicanno-ilm10b4-hg19: new package (#23101)Glenn Johnson1-0/+19
2021-04-20r-illuminahumanmethylationepicmanifest: new package (#23102)Glenn Johnson1-0/+19
2021-04-20Boost: add v1.76.0 (#23118)Tim Haines1-0/+1
2021-04-20r-prettydoc: new package (#23109)Glenn Johnson1-0/+23
2021-04-20r-pbivnorm: new package (#23108)Glenn Johnson1-0/+18
2021-04-20r-jade: new package (#23103)Glenn Johnson1-0/+23
2021-04-20r-kpmt: new package (#23104)Glenn Johnson1-0/+19
2021-04-20r-marray: new package (#23105)Glenn Johnson1-0/+21
2021-04-20r-shinythemes: new package (#23115)Glenn Johnson1-0/+22
2021-04-20r-mcmc: new package (#23106)Glenn Johnson1-0/+25
2021-04-20r-optimx: new package (#23107)Glenn Johnson1-0/+25
2021-04-20r-rpmm: new package (#23110)Glenn Johnson1-0/+22
2021-04-20r-rsconnect: new package (#23111)Glenn Johnson1-0/+28
2021-04-20r-ruv: new package (#23113)Glenn Johnson1-0/+32
2021-04-20r-shinyjs: new package (#23114)Glenn Johnson1-0/+29
2021-04-20r-bridgesampling: new package (#23116)Glenn Johnson1-0/+29
2021-04-20binutils: drop overly strict conflicts for assembler/linker (#23122)Harmen Stoppels1-8/+7
This has been checked with gcc on ubuntu 16.04, which ships binutils 2.26 by default, using spack's binutils 2.36. Only the combination +gas and ~ld seems to trigger this incompatibility with debug symbols (gcc -g -O2 main.c fails with the error in the comment above the conflict)
2021-04-20Adding CUDA SDK 11.3.0 (#23051)Filippo Spiga1-0/+4
* Adding CUDA SDK 11.3.0 * Complying with Flake8 style checks
2021-04-19genfit: Add an older version, update dependencies (#20892)Dmitri Smirnov1-1/+6
- Add dependency on eigen package - Add last version known to work with ROOT 6.16.00. Until recently GenFit lacked any tagged versions, therefore, we use a commit hash