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2024-07-30perl-bio-ensembl-funcgen: new package (#44508)Teague Sterling1-0/+37
* Adding the perl-bio-ensembl-funcgen package * Update package.py * Update package.py
2024-07-29trilinos: add v16.0.0 (#45402)jmlapre1-0/+2
2024-07-29py-furo: add new versions (#45439)Richard Berger1-1/+5
2024-07-29add new maintainer (#45436)Teo1-1/+1
2024-07-29Remove maintainership from packages I have no stake in (#45435)Seth R. Johnson8-15/+4
2024-07-29linaro-forge: added 24.0.3 version (#45430)RichardBuntLinaro1-0/+6
2024-07-29perl-bio-ensembl: new package (#44506)Teague Sterling1-0/+46
* Adding perl-bio-ensembl package * Fixing checksums * Update package.py
2024-07-29add spack audit configs to ciTodd Gamblin1-0/+4
Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-07-29wasi-sdk: add default providerTodd Gamblin3-13/+17
This was missed in #45394 because we don't run unit tests for package PRs, and `test_all_virtual_packages_have_default_providers`, which would've caught it, is a unit test, not an audit. - [x] add a default provider for `wasi-sdk` in `etc/spack/defaults/packages.yaml` (which we require for all virtuals) - [x] rework `test_all_virtual_packages_have_default_providers` as an audit called `_ensure_all_virtual_packages_have_default_providers` Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-07-29meson: add v1.4.2, v1.5.1 (#45384)Matt Jolly1-42/+120
Also deprecate old and superseded versions
2024-07-26pinentry: old to new test API (#45011)AcriusWinter1-12/+18
* pinentry: New API * move code around * added back version check * Complete check_version refactor * Honor original handling of guis (i.e., don't try if not there) --------- Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
2024-07-26py-mne: add v1.7.1 (#45400)Manuela Kuhn1-7/+12
* py-mne: add v1.7.1 * fix style
2024-07-26apptainer: add v1.3.2, v1.3.3 (#45398)Walter de Jong1-1/+4
* upgrade apptainer: security fix apptainer 1.3.1 has a high severity security issue: CVE-2024-3727 Upgrade to 1.3.2 or preferably 1.3.3 * added comment for 1.3.1 --------- Co-authored-by: Walter de Jong <walter.dejong@surf.nl>
2024-07-26Fix build failure when kokkos +rocm is enabled. (#44459)Sreenivasa Murthy Kolam1-0/+2
* fix kokkos +rocm build failure * address review comments * address review comments . revert the previous changes * address review comments. Add rocthrust for 4.3 version onwards
2024-07-26intel-oneapi-compilers: update description with current compilers (#45348)Wouter Deconinck1-1/+2
* intel-oneapi-compilers: update description with current compilers * Update var/spack/repos/builtin/packages/intel-oneapi-compilers/package.py Co-authored-by: Robert Cohn <robert.s.cohn@intel.com> * intel-oneapi-compilers: break docstring line --------- Co-authored-by: Robert Cohn <robert.s.cohn@intel.com>
2024-07-25kokkos: new test API (#45010)AcriusWinter1-46/+10
* kokkos: new test API * kokkos: added import llnl.util.lang as lang because earlier versions couldn't be installed without it --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-07-25povray: new test API (#45174)AcriusWinter1-19/+21
* povray: new test API * capture output and test name change * povray: add v3.7.0.10, deprecate 3.7.0.8 --------- Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
2024-07-25umpire: old to new test API and refactor (#44957)AcriusWinter1-35/+53
* umpire: old to new test format * umpire: old to new test method and refactor * indentation * black reformat * last minute syntax * docstring and checks * black format * change test name * method call correction * Resolve problem with stand-alone tests (or examples) not loading library (Fixes #44960) --------- Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
2024-07-25openmpi: add v5.0.4 and v5.0.5 (#45305)Howard Pritchard1-2/+8
* Open MPI: add release 5.0.4 * OpenMPI: add release 5.0.5 needed quick turnaround owing to https://github.com/open-mpi/ompi/issues/12693 --------- Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2024-07-25damask 3.0.0 and 3.0.0-beta2 (#45405)Martin Diehl4-4/+28
2024-07-25wasi-sdk-prebuilt: new package (#45394)Teague Sterling1-0/+38
* wasi-sdk-prebuilt: new package * move url_for_version to be first method --------- Signed-off-by: Teague Sterling <teaguesterling@gmail.com>
2024-07-25CMake package: add versions 3.30.0 and 3.30.1 (#45418)John W. Parent1-0/+2
2024-07-25libgcrypt: add patch for avx512 support (#45432)Adam J. Stewart2-0/+36
2024-07-25py-tensorflow: alter gcc conflict, fix build (#45330)Andrew W Elble1-8/+31
2024-07-24sz: new test API (#45363)AcriusWinter1-77/+59
* sz: new test API * fix typo; check installed executable; conform to subpart naming convention * skip tests early if not installed; remove unnecessary "_sz" from test part names --------- Co-authored-by: Tamara Dahlgren <dahlgren1@llnl.gov>
2024-07-24strumpack: make standalone test for +mpi more robust (#44943)Tamara Dahlgren1-13/+19
* strumpack: make standalone test for +mpi more robust * Comment about which MPI launcher being attempted
2024-07-24halide: add v18.0.0 (#45401)Teo1-7/+11
* Added Halide 18 * Fix style+other stuff * Accept compiler deps * 17.0.2 too * reorder versions
2024-07-24Netlib-lapack package: search for correct library names on Windows (#45417)John W. Parent1-9/+19
Library names on Windows are not typically prefixed with lib; the default `.libs` implementation accounts for this, but `netlib-lapack` has a custom implementation of `.libs` that did not account for this.
2024-07-24build(deps): bump docker/login-action from 3.2.0 to 3.3.0 (#45378)dependabot[bot]1-2/+2
Bumps [docker/login-action](https://github.com/docker/login-action) from 3.2.0 to 3.3.0. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](https://github.com/docker/login-action/compare/0d4c9c5ea7693da7b068278f7b52bda2a190a446...9780b0c442fbb1117ed29e0efdff1e18412f7567) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-07-24`spack pkg grep`: don't warn when grepping for quoted strings (#45412)Todd Gamblin2-2/+5
The `Executable` class emits a warning when you pass quoted arguments to it: ``` > spack pkg grep '"namespace"' ==> Warning: Quotes in command arguments can confuse scripts like configure. The following arguments may cause problems when executed: "namespace" Quotes aren't needed because spack doesn't use a shell. Consider removing them. If multiple levels of quotation are required, use `ignore_quotes=True`. ``` This is to warn new package authors who aren't used to calling build commands in python. It's not useful for `spack pkg grep`, where we really are passing args on the command line, and if we pass a quoted string, we probably meant to. - [x] make `ignore_quotes` an instance variable, not just an argument to ``__call__` - [x] set `ignore_quotes` to `True` in `spack pkg grep` Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-07-24hybpiper: change package type, add version 2.1.8 (#45262)snehring1-3/+30
Signed-off-by: Shane Nehring <snehring@iastate.edu>
2024-07-24CI: add ML ROCm stack (#45302)afzpatel3-0/+117
* add ML ROCm stack * add suggested changes * remove py-torch and py-tensorflow-estimator * add TF_ROCM_AMDGPU_TARGETS env variable and remove packages from pipeline * remove py-jax and py-xgboost
2024-07-23uftrace: change to executable declaration (#45403)AcriusWinter1-1/+1
2024-07-23py-arrow: add v1.3.0 (switch to flit-core) (#45123)Wouter Deconinck1-2/+6
2024-07-23ruby: add v3.3.4 (#45334)Thomas Applencourt1-0/+1
* Ruby Add 3.3.4 * Update package.py * Update package.py
2024-07-23generate-ninja: new package (#45391)Teague Sterling1-0/+50
Signed-off-by: Teague Sterling <teaguesterling@gmail.com>
2024-07-23ROOT should add_include_path virtual glu for consistency. (#45057)Karol Krizka1-1/+1
2024-07-23e4s rocm external ci stack: upgrade to v6.1.2 (#45356)eugeneswalker3-76/+77
* e4s rocm external ci stack: upgrade to v6.1.2 * magma: add rocm-core 6.1.2
2024-07-23build(deps): bump pytest from 8.2.2 to 8.3.1 in /lib/spack/docs (#45377)dependabot[bot]1-1/+1
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.2.2 to 8.3.1. - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/8.2.2...8.3.1) --- updated-dependencies: - dependency-name: pytest dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-07-23build(deps): bump sphinx from 7.4.6 to 7.4.7 in /lib/spack/docs (#45376)dependabot[bot]1-1/+1
Bumps [sphinx](https://github.com/sphinx-doc/sphinx) from 7.4.6 to 7.4.7. - [Release notes](https://github.com/sphinx-doc/sphinx/releases) - [Changelog](https://github.com/sphinx-doc/sphinx/blob/master/CHANGES.rst) - [Commits](https://github.com/sphinx-doc/sphinx/compare/v7.4.6...v7.4.7) --- updated-dependencies: - dependency-name: sphinx dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-07-23build(deps): bump docker/setup-buildx-action from 3.4.0 to 3.5.0 (#45379)dependabot[bot]1-1/+1
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 3.4.0 to 3.5.0. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/4fd812986e6c8c2a69e18311145f9371337f27d4...aa33708b10e362ff993539393ff100fa93ed6a27) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-07-23build(deps): bump docker/build-push-action from 6.4.1 to 6.5.0 (#45380)dependabot[bot]1-1/+1
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 6.4.1 to 6.5.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/1ca370b3a9802c92e886402e0dd88098a2533b12...5176d81f87c23d6fc96624dfdbcd9f3830bbe445) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-07-23build(deps): bump docker/setup-qemu-action from 3.1.0 to 3.2.0 (#45381)dependabot[bot]1-1/+1
Bumps [docker/setup-qemu-action](https://github.com/docker/setup-qemu-action) from 3.1.0 to 3.2.0. - [Release notes](https://github.com/docker/setup-qemu-action/releases) - [Commits](https://github.com/docker/setup-qemu-action/compare/5927c834f5b4fdf503fca6f4c7eccda82949e1ee...49b3bc8e6bdd4a60e6116a5414239cba5943d3cf) --- updated-dependencies: - dependency-name: docker/setup-qemu-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-07-23gh: convert to GoPackage (#45351)Wouter Deconinck1-11/+7
* gh: convert to GoPackage * gh: fix style
2024-07-23GoPackage: default `-modcacherw` to ensure stage cleanup (#45350)Wouter Deconinck1-1/+1
2024-07-23Update and clean up hdf-eos2 package.py to fix build errors with Intel ↵Dom Heinzeller1-13/+4
oneAPI (#45399)
2024-07-23fmt: add 11.0.2 (#45396)Mikael Simberg1-0/+1
2024-07-23Remove `# generated` comments from many packages, add some missing ↵Mikael Simberg15-19/+23
`depends_on("cxx")` (#45395)
2024-07-22py-mne-bids: add new package (#45374)Manuela Kuhn1-0/+29
2024-07-22uftrace: new test API, add 0.16 with libtraceevent, fix build (#45364)AcriusWinter3-30/+75
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2025-01-07 21:50:44 +0000