summaryrefslogtreecommitdiff
AgeCommit message (Collapse)AuthorFilesLines
2023-06-13modules: append trailing delimiter to MANPATH when set (#36678)Xavier Delaruelle8-1/+143
Update modulefile templates to append a trailing delimiter to MANPATH environment variable, if the modulefile sets it. With a trailing delimiter at ends of MANPATH's value, man will search the system man pages after searching the specific paths set. Using append-path/append_path to add this element, the module tool ensures it is appended only once. When modulefile is unloaded, the number of append attempt is decreased, thus the trailing delimiter is removed only if this number equals 0. Disclaimer: no path element should be appended to MANPATH by generated modulefiles. It should always be prepended to ensure this variable's value ends with the trailing delimiter. Fixes #11355.
2023-06-12justbuild: bump version 1.1.2 (#38320)Alberto Sartori1-0/+1
2023-06-12curl: add v8.1.2 (#38332)Alec Scott1-0/+1
2023-06-12Update sp package (#38208)Alex Richert1-2/+20
2023-06-12cpp-httplib: add v0.12.5 (#38331)Alec Scott1-0/+1
2023-06-12direnv: add v2.32.3 (#38333)Alec Scott1-0/+1
2023-06-12etcd: add v3.5.9 (#38334)Alec Scott1-0/+1
2023-06-12fastp: add v0.23.4 (#38335)Alec Scott1-0/+1
2023-06-12opencascade: new variants (#35345)Wouter Deconinck1-30/+107
* opencascade: new variants OpenCascade has several major modules and not every application needs all of them. This adds variants for the various modules. It also uodatws the 3rdparty dependency treatment. * [@spackbot] updating style on behalf of wdconinc * Update var/spack/repos/builtin/packages/opencascade/package.py * opencascade: remove variant foundation_classes (always true) * [@spackbot] updating style on behalf of wdconinc * Update var/spack/repos/builtin/packages/opencascade/package.py --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2023-06-12mercury: add v2.3.0 (#38279)Jerome Soumagne1-13/+9
* fix Boost dependency * fix testing and move psm2/sockets as unsupported * fix style to separate maintainers/tags/version
2023-06-12mvapich2: add hwloc_graphics variant (#38028)MatthewLieber1-1/+5
Co-authored-by: Matthew Lieber <lieber.31@osu.edu>
2023-06-12neko: add v0.6.0 and fixed rocm package recipe (#38024)Niclas Jansson1-1/+4
2023-06-12mochi-margo: correct patch versions (#38087)willdunklin1-1/+1
2023-06-12Add new Kokkos release (#38049)Bruno Turcksin1-0/+1
2023-06-12pip is a pythonextension not a pythonpackage, and it turns out we werent ↵Peter Scheibel2-47/+46
doing our external surgery on things that inherited pythonextension (#38186)
2023-06-12Deprecate R packages for spatial analysis (#38158)Adam J. Stewart3-22/+110
* Deprecate R packages for spatial analysis * [@spackbot] updating style on behalf of adamjstewart --------- Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
2023-06-12libtlx: add v0.6.1 (#38134)Alec Scott1-0/+1
2023-06-12ccache: add v4.8.1 (#38114)Alec Scott1-0/+1
2023-06-12cdhit: add missing perl dep, patch shebangs (#38179)snehring2-0/+30
2023-06-12wrf: add v4.5.0 (#37618)MichaelLaufer3-2/+78
2023-06-12whizard: add tirpc/lib to the link flags (#38050)Juan Miguel Carceller1-2/+2
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-06-12gdb: fix debuginfod for version 10 (#38058)Manuela Kuhn1-1/+1
2023-06-12kokkos: fix c++20 constraint (#37555)Martin Pokorny1-1/+1
2023-06-12FrontISTR: relax the requirement on Trillinos (#38321)nkgh771-1/+1
2023-06-12podio: bump minimal version of catch2 (#38255)Thomas Madlener1-1/+2
2023-06-12buildcache: remove deprecated api (#37246)Harmen Stoppels11-353/+72
The API was deprecated in v0.20 and is slated for removal in v0.21
2023-06-12DaV: Use VTKm for all build configurations of ParaView (#38184)kwryankrattiger1-1/+2
2023-06-12superlu: new version 6.0.0 (#38262)Wouter Deconinck1-1/+6
No changes to build system required. Changelog: https://github.com/xiaoyeli/superlu/compare/v5.3.0...v6.0.0 Since this new version adds "64-bit indexing support", and since at least one dependent package (`armadillo`) requires "32-bit integers" (https://gitlab.com/conradsnicta/armadillo-code/-/commit/faa6cbf895ba6f526473ed48779685919b36aa9f), the previous version remains preferred. * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2023-06-12gaudi: remove the py-qmtest dependency (#38274)Juan Miguel Carceller1-6/+1
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-06-12orthofinder: add 2.5.5, add variants (#38298)George Young1-1/+23
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-06-12bootstrap: add minimum versions required for flake8 and pytest (#38322)Massimiliano Culpo2-2/+3
2023-06-12fastq-screen: add 0.15.3, add variants (#38288)George Young1-6/+21
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-06-12ltr-retriever 2.9.4 (#38300)snehring2-1/+38
2023-06-12perl-libwww-perl: adding perl-clone dependency (#38301)snehring1-0/+1
2023-06-12alglib: add v4.00.0 (#38313)Alec Scott1-0/+1
2023-06-12bismark: add v0.24.1 (#38315)Alec Scott0-0/+0
2023-06-12blogbench: add v1.2 (#38316)Alec Scott1-0/+1
2023-06-12consul: add v1.15.3 (#38317)Alec Scott1-0/+1
2023-06-11Fix typo in example code block (#38318)Christopher Christofi1-1/+1
2023-06-11py-mypy: add 1.3.0 (#38286)Manuela Kuhn1-0/+2
* py-mypy: add 1.3.0 * Remove redundant py-typed-ast dependency * Read python@3.7 dep
2023-06-11py-deeptools: add 3.5.2, update dependency versions (#38287)George Young1-5/+7
* py-deeptools: add 3.5.2, update dependency versions * Update var/spack/repos/builtin/packages/py-deeptools/package.py Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * Update var/spack/repos/builtin/packages/py-deeptools/package.py Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> * Rearranging dependencies to match setup.py --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-06-11py-jedi: add 0.18.2 (#38177)Manuela Kuhn1-13/+7
* py-jedi: add 0.18.2 * Add setuptools as run dependency
2023-06-11build(deps): bump docker/login-action from 2.1.0 to 2.2.0 (#38241)dependabot[bot]1-2/+2
Bumps [docker/login-action](https://github.com/docker/login-action) from 2.1.0 to 2.2.0. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](https://github.com/docker/login-action/compare/f4ef78c080cd8ba55a85445d5b36e214a81df20a...465a07811f14bebb1938fbed4728c6a1ff8901fc) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11build(deps): bump docker/setup-buildx-action from 2.5.0 to 2.6.0 (#38242)dependabot[bot]1-1/+1
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.5.0 to 2.6.0. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/4b4e9c3e2d4531116a6f8ba8e71fc6e2cb6e6c8c...6a58db7e0d21ca03e6c44877909e80e45217eed2) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11build(deps): bump docker/setup-qemu-action from 2.1.0 to 2.2.0 (#38243)dependabot[bot]1-1/+1
Bumps [docker/setup-qemu-action](https://github.com/docker/setup-qemu-action) from 2.1.0 to 2.2.0. - [Release notes](https://github.com/docker/setup-qemu-action/releases) - [Commits](https://github.com/docker/setup-qemu-action/compare/e81a89b1732b9c48d79cd809d8d81d79c4647a18...2b82ce82d56a2a04d2637cd93a637ae1b359c0a7) --- updated-dependencies: - dependency-name: docker/setup-qemu-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11build(deps): bump urllib3 from 2.0.2 to 2.0.3 in /lib/spack/docs (#38244)dependabot[bot]1-1/+1
Bumps [urllib3](https://github.com/urllib3/urllib3) from 2.0.2 to 2.0.3. - [Release notes](https://github.com/urllib3/urllib3/releases) - [Changelog](https://github.com/urllib3/urllib3/blob/main/CHANGES.rst) - [Commits](https://github.com/urllib3/urllib3/compare/2.0.2...2.0.3) --- updated-dependencies: - dependency-name: urllib3 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11build(deps): bump sphinx-rtd-theme in /lib/spack/docs (#38245)dependabot[bot]1-1/+1
Bumps [sphinx-rtd-theme](https://github.com/readthedocs/sphinx_rtd_theme) from 1.2.1 to 1.2.2. - [Changelog](https://github.com/readthedocs/sphinx_rtd_theme/blob/master/docs/changelog.rst) - [Commits](https://github.com/readthedocs/sphinx_rtd_theme/compare/1.2.1...1.2.2) --- updated-dependencies: - dependency-name: sphinx-rtd-theme dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11build(deps): bump docker/build-push-action from 4.0.0 to 4.1.0 (#38306)dependabot[bot]0-0/+0
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4.0.0 to 4.1.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/3b5e8027fcad23fda98b2e3ac259d8d67585f671...44ea916f6c540f9302d50c2b1e5a8dc071f15cdf) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11build(deps): bump docker/build-push-action from 4.0.0 to 4.1.0 (#38306)dependabot[bot]1-1/+1
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4.0.0 to 4.1.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/3b5e8027fcad23fda98b2e3ac259d8d67585f671...44ea916f6c540f9302d50c2b1e5a8dc071f15cdf) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-06-11py-multidict: add 6.0.4 (#38284)Manuela Kuhn1-4/+4
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2025-02-22 05:36:02 +0000