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2021-12-17Fix building container images (#28063)Massimiliano Culpo4-3/+2
* Fix building container images Patchelf is bootstrapped from sources, so we cannot disable that mechanism until a finer selection is possible in the configuration. * Build on changes to the Dockerfile * Don't login to Dockerhub on PRs
2021-12-17Add setdefault option to tcl module (#14686)victorusu5-19/+79
This commit introduces the command spack module tcl setdefault <package> similar to the one already available for lmod Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-12-16Additional flags for ROMS (#27951)AMD Toolchain Support1-1/+2
Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-16CMake: fix rhash detection (#27944)iarspider1-3/+46
* RHash: update version; create symlink librash.so * Install headers * Flake-8 * Update package.py * Update package.py * Update package.py (#19) * Update package.py * Update package.py * Update var/spack/repos/builtin/packages/rhash/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Fix installation on macOS Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-16hdf5: add version 1.10.8 (#27613)Larry Knox3-3/+65
* Update hdf5/package.py to add HDF5 1.10.8 release and move preferred version from 1.10.7 to 1.10.8. * silo: versions before 4.11 conflict with hdf5 >= 1.10.8. * Add patch file for silo@4.11 with hdf5 1.10 >=1.10.8 and hdf5 1.12 >= 1.12.1.
2021-12-16petsc: enable +rocm+kokkos (#27779)Satish Balay2-3/+29
Also fix kokkos-kernels when kokkos is built with +rocm
2021-12-16rocprofiler-dev package: needs numactl as link dep for tests (#27839)eugeneswalker1-0/+2
2021-12-16New package: py-pynisher (#28052)Jen Herting1-0/+20
* [py-pynisher] created template * [py-pynisher] - Added homepage - Added description - Removed fixmes - added dependencies
2021-12-16OpenMPI Package: add variant for romio (#27897)Howard Pritchard1-0/+4
Add option to disable the internal romio build.
2021-12-16New package: py-scinum (#28041)iarspider1-0/+19
* New package: py-scinum * Update var/spack/repos/builtin/packages/py-scinum/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-16wonton package: fix reference error (#27963)Tracy-Pantleo1-1/+1
2021-12-16New package: py-schema (#28039)iarspider1-0/+18
2021-12-16New package: py-shellingham (#28043)iarspider1-0/+19
2021-12-16New version: py-correctionlib 2.1.0 (#28051)iarspider1-0/+1
2021-12-16aocc: add v3.2.0 (#27946)vijay kallesh1-0/+2
Co-authored-by: amd-toolchain-support <toolchainsupport@amd.com>
2021-12-16Set backup=False by default in filter_file (#28036)Harmen Stoppels1-1/+1
2021-12-16Fix table formatting (#28037)Harmen Stoppels1-1/+1
2021-12-16MANPATH needs a trailing ':' to utilize system defaults (#21682)Andrew W Elble3-1/+23
otherwise spack breaks using system man pages by default. Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-12-16Added opensuse/leap:15 to spack containerize (#27837)Christian Goll4-5/+58
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-12-15Provide meaningful message for empty environment installs (#28031)Tamara Dahlgren2-9/+26
* Provide a meaningful failure message for installation of an empty environment * Allow regenerating view per offline discussion
2021-12-16Bugfix: Simplify preferred-test versions; set checksum defaults (#28026)Tamara Dahlgren5-19/+17
* Simplify preferred-test versions; set checksum defaults * Fix test_preferred failure
2021-12-16delly2: updating to v0.9.1 (#28000)snehring1-17/+29
2021-12-16meep: fixed dependencies (#27574)Thomas Green1-10/+28
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-12-16samtools: fixing build issue due to change in 1.14 (#28024)snehring1-5/+8
2021-12-15Fix for OpenFOAM pthread issue for AOCC 3.2 (#27949)AMD Toolchain Support1-0/+12
* Fix for OpenFOAM pthread issue for AOCC 3.2 * addressing the review comments * updating when command for aocc v3.2.0 and above Co-authored-by: mohan babu <mohbabul@amd.com>
2021-12-15pcre package: update download URL (#27867)Dennis R Kennetz1-1/+2
* ftp url is dead as stated in the home page. The sha256 is the same in the sourceforge dl. * added myself as a maintainer per spackbot's rec
2021-12-15New package: py-copulas (#27920)Jen Herting1-0/+28
Co-authored-by: Sid Pendelberry <sid@rit.edu>
2021-12-15mpitrampoline package: add versions up to 2.8.0 (#27928)Erik Schnetter1-0/+6
2021-12-15py-matplotlib: add v3.5.1 (#27929)Adam J. Stewart1-0/+1
2021-12-15py-pandas: add v1.3.5 (#27930)Adam J. Stewart1-1/+3
2021-12-15assimp package: add version 5.1.3 (#27934)Wouter Deconinck1-0/+1
2021-12-15likwid package: add version 5.2.1 (#27935)Thomas Gruber1-0/+1
2021-12-15ExaGO package: add version 1.2.0; update dependency constraints (#27961)Asher Mancinelli1-8/+6
* PETSc is a core dependency, yet we left a variant for PETSc. This was removed, and ExaGO always depends on PETSc. The CMake arguments were updated accordingly. * camp+cuda is only a dependency when we build with RAJA and CUDA.
2021-12-15opa-psm2 package: add version 11.2.206 (#27968)snehring1-0/+1
2021-12-15RADICAL-Cybertools packages: add versions (#28002)Mikhail Titov3-5/+8
* py-radical-entk: add version 1.9.0 * py-radical-pilot: add version 1.10.1 * py-radical-utils: add version 1.9.1 * py-radical-utils: requires py-pymongo less than version 4
2021-12-15New package: py-trojanzoo-sphinx-theme (#27972)Adam J. Stewart1-0/+20
2021-12-15py-sphinx package: add version 4.3.1 (#27933)Adam J. Stewart1-2/+4
2021-12-15New package: py-pysqlite3 (#28020)iarspider1-0/+26
* New package: py-pysqlite3 * Apply suggestions from code review Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-12-15New package: py-prwlock (#28017)iarspider1-0/+17
2021-12-15New package: py-pybrain (#28019)iarspider1-0/+20
2021-12-15New package: py-parsimonious (#28015)iarspider1-0/+18
2021-12-15New version: py-prompt-toolkit 3.0.24 (#28016)iarspider1-1/+3
2021-12-15Revert "patches: make re-applied patches idempotent (#26784)" (#27625)Harmen Stoppels4-137/+25
This reverts commit c5ca0db27fce5d772dc8a4fcffec3b62bb0bf1f3.
2021-12-15libtree: add v3.0.0 (#28011)Harmen Stoppels1-1/+1
2021-12-15open3d: add new package (#27577)Adam J. Stewart5-0/+190
2021-12-15mesa: check correct LLVM variant for dylib (#27862)kwryankrattiger2-2/+2
2021-12-15mesa: add v21.2.6, v21.3.1 (#27796)Wouter Deconinck1-0/+3
2021-12-15Add option to minimize full debug cores. include warning message about ↵Greg Becker5-22/+74
performance (#27970) Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-12-14New package: py-neurolab (#27996)iarspider1-0/+18
* New package: py-neurolab * Update package.py * Update package.py
2021-12-14New package: py-lizard (#27994)iarspider1-0/+20
* New package: py-lizard * Update package.py
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