summaryrefslogtreecommitdiff
AgeCommit message (Collapse)AuthorFilesLines
2024-02-16build(deps): bump pytest from 8.0.0 to 8.0.1 in /lib/spack/docs (#42733)dependabot[bot]1-1/+1
Bumps [pytest](https://github.com/pytest-dev/pytest) from 8.0.0 to 8.0.1. - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/8.0.0...8.0.1) --- updated-dependencies: - dependency-name: pytest dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-02-16Kokkos Ecosystem: update for release 4.2.01 (#42711)Luc Berger2-2/+4
* Kokkos Ecosystem: update for release 4.2.01 Will rebase this on top of develop once Kokkos Core PR merges. * Kokkos Ecosystem: update license statement to reflect current license
2024-02-16expat: Add latest release 2.6.0 with security fixes (#42680)Sebastian Pipping1-2/+35
* expat: Add latest release 2.6.0 with security fixes * expat: Deprecate vulnerable 2.5.0 * expat: Add past CVEs and where they were fixed
2024-02-16spectre: add v2024.02.05 (#42496)SXS Bot1-0/+3
* spectre: add v2024.02.05 * [@spackbot] updating style on behalf of sxs-bot --------- Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2024-02-16rust: enable vendor (#42365)Lydéric Debusschère1-0/+3
* rust: enable vendor * rust: modify vendor description; move the call of variant * rust: fix style * rust: typo * rust: remove variant 'vendor' to let vendoring as default fonctionality --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2024-02-16helics: Add version 3.5.0 (#42572)HELICS-bot1-0/+6
* helics: Add version 3.5.0 * helics: define CMAKE_CXX_STANDARD=20 when GCC>=13 is used to compile --------- Co-authored-by: github-actions[bot] <github-actions[bot]@users.noreply.github.com> Co-authored-by: Ryan Mast <mast9@llnl.gov>
2024-02-16py-torchmetrics: add v1.3.1 (#42638)Adam J. Stewart1-0/+1
2024-02-16build(deps): bump black in /.github/workflows/style (#42631)dependabot[bot]1-1/+1
Bumps [black](https://github.com/psf/black) from 24.1.1 to 24.2.0. - [Release notes](https://github.com/psf/black/releases) - [Changelog](https://github.com/psf/black/blob/main/CHANGES.md) - [Commits](https://github.com/psf/black/compare/24.1.1...24.2.0) --- updated-dependencies: - dependency-name: black dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-02-16build(deps): bump black from 24.1.1 to 24.2.0 in /lib/spack/docs (#42629)dependabot[bot]1-1/+1
Bumps [black](https://github.com/psf/black) from 24.1.1 to 24.2.0. - [Release notes](https://github.com/psf/black/releases) - [Changelog](https://github.com/psf/black/blob/main/CHANGES.md) - [Commits](https://github.com/psf/black/compare/24.1.1...24.2.0) --- updated-dependencies: - dependency-name: black dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-02-16build(deps): bump python-levenshtein in /lib/spack/docs (#42630)dependabot[bot]1-1/+1
Bumps [python-levenshtein](https://github.com/rapidfuzz/python-Levenshtein) from 0.24.0 to 0.25.0. - [Release notes](https://github.com/rapidfuzz/python-Levenshtein/releases) - [Changelog](https://github.com/rapidfuzz/python-Levenshtein/blob/main/HISTORY.md) - [Commits](https://github.com/rapidfuzz/python-Levenshtein/compare/v0.24.0...v0.25.0) --- updated-dependencies: - dependency-name: python-levenshtein dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-02-16bigdft-futile: new versions 1.9.3, 1.9.4 (#42646)Martin Lang1-0/+2
2024-02-16py-black: add v24.2.0 (#42639)Adam J. Stewart1-0/+1
2024-02-16py-jsonargparse: add v4.27.5 (#42640)Adam J. Stewart2-1/+2
2024-02-16openmpi: add ucc to fabrics (#41889)Carlos Bederián1-0/+9
2024-02-16Update maintainers for Kokkos and add Kokkos 4.2.1 (#42690)Nicolas Morales1-1/+2
* update kokkos spack package maintainers * add Kokkos 4.2.01 * Update var/spack/repos/builtin/packages/kokkos/package.py Co-authored-by: Luc Berger <lberge@sandia.gov> --------- Co-authored-by: Alec Scott <alec@bcs.sh> Co-authored-by: Luc Berger <lberge@sandia.gov>
2024-02-16nfft: new versions 3.5.1, 3.5.2, 3.5.3 (#42645)Martin Lang1-0/+3
2024-02-16dftbplus: new versions 22.2, 23.1 (#42647)Martin Lang1-0/+2
2024-02-16Update package.py for hypre release 2.31.0 (#42689)Rob Falgout1-0/+1
2024-02-16Add aocc support to ESMF (#42708)Alex Richert1-0/+4
* Add aocc support to ESMF * Update package.py
2024-02-16add new CUTLASS versions (#42715)WuK1-0/+2
2024-02-16build(deps): bump dorny/paths-filter from 3.0.0 to 3.0.1 (#42710)dependabot[bot]1-1/+1
Bumps [dorny/paths-filter](https://github.com/dorny/paths-filter) from 3.0.0 to 3.0.1. - [Release notes](https://github.com/dorny/paths-filter/releases) - [Changelog](https://github.com/dorny/paths-filter/blob/master/CHANGELOG.md) - [Commits](https://github.com/dorny/paths-filter/compare/0bc4621a3135347011ad047f9ecf449bf72ce2bd...ebc4d7e9ebcb0b1eb21480bb8f43113e996ac77a) --- updated-dependencies: - dependency-name: dorny/paths-filter dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-02-16perl-datetime-format-iso8601: New package (#42719)Arne Becker1-0/+34
Adds DateTime::Format::ISO8601
2024-02-16clingo: add version 5.7.0 (#42707)Todd Gamblin1-0/+1
5.7.0 was just released. It includes a number of changes requested and/or upstreamed by Spack developers, e.g.: * API for accessing optimization priorities: https://github.com/potassco/clingo/pull/406 * Hash optimization: https://github.com/potassco/clingo/pull/441 * Contributing Guide: https://github.com/potassco/clingo/pull/465 * Hiding more ELF symbols: * https://github.com/potassco/clingo/pull/447 * https://github.com/potassco/clingo/pull/449
2024-02-16dlb: add v3.4 (#42722)Victor Lopez Herrero1-0/+1
2024-02-16Add support for clang with OpenMP and other minor changes to oneapi build ↵Mikael Simberg2-10/+28
system (#42717) * Add support for clang in oneapi packages with OpenMP * Add fallback search for libomp in OneApi package with OpenMP threading * Add requires for the compiler when using threads=openmp in intel-oneapi-mkl * Cosmetic changes to messages in oneapi.py * Update error message in oneapi.py Co-authored-by: Robert Cohn <rscohn2@gmail.com> * Update another error message in oneapi.py Co-authored-by: Robert Cohn <rscohn2@gmail.com> * Inline helper error function in oneapi.py * Update one more error message in oneapi.py * Wrap long line in oneapi.py --------- Co-authored-by: Robert Cohn <rscohn2@gmail.com>
2024-02-16[intel-oneapi-mkl] provide omp lib for threads=openmp (#42653)Robert Cohn2-1/+46
2024-02-15allow packages to request no submodules be updated (#40409)Tim Fuller3-5/+39
* allow packages to request no submodules be updated when self.submodules is a callable function * Extend the test added in Allow more fine-grained control over what submodules are updated: part 2 #27293 to include this case * Update the type signature for the submodules arg of version() in directives.py --------- Co-authored-by: tjfulle <tjfulle@users.noreply.github.com>
2024-02-16develop: Add -b/--build-directory option to set build_directory package ↵Victor Brunini6-3/+46
attribute (#39606) * develop: Add -b/--build-directory option to set build_directory package attribute. * Update docs --------- Co-authored-by: psakievich <psakiev@sandia.gov> Co-authored-by: vbrunini <vbrunini@users.noreply.github.com>
2024-02-15SST: only run autoreconf for versions from Git branches (#42712)Eric Berquist3-13/+19
2024-02-15Fix spack --profile|--pdb <cmd> (#42662)Scott Wittenburg1-2/+2
2024-02-15celeritas: new version 0.4.2 (#42702)Seth R. Johnson1-3/+5
2024-02-15docs: fix typo (#42688)Jemma Stachelek1-1/+1
2024-02-15compilers: fixup order of arguments to satisfies (#42682)Harmen Stoppels2-16/+62
2024-02-14elpa: fix checksum (#42674)Harmen Stoppels1-1/+1
2024-02-14veclibfort: explicitly add platform=darwin as requirement (#42664)Henrik Stooss1-0/+2
2024-02-14VTK: limit patches to v8 (#42505)John W. Parent1-3/+3
* VTK: limit patches to v8 * Finer scrope on patch version applicability
2024-02-14Deprecate ROCm 5.1.0 till 5.2.3 (#41794)Sreenivasa Murthy Kolam50-248/+294
2024-02-13cmake: Enable compilation database generation (#42353)John Pennycook1-1/+22
* cmake: Enable CMAKE_EXPORT_COMPILE_COMMANDS Enabling this option causes CMake to generate a compile_commands.json file containing a compilation database that can be used to drive third-party tools. CMAKE_EXPORT_COMPILE_COMMANDS only exists for CMake >= 3.5 Exporting compilation databases is only supported for Makefile and Ninja generators, so check these conditions as well. CMAKE_EXPORT_COMPILE_COMMANDS is only enabled in supported configurations
2024-02-13Remove boost as dependency for trilinos+stk (#39556)Jon Rood2-13/+2
* Remove boost as dependency for trilinos+stk. * Formatting. * Put bounds on STK requirement of Boost.
2024-02-13boost: Add patch to workaround mpl compiler error with gcc 8.3 and c++17. ↵Victor Brunini2-0/+64
(#39144) Works around this issue: https://github.com/boostorg/mpl/issues/44 Co-authored-by: psakievich <psakiev@sandia.gov>
2024-02-13ELPA package: add patched version from Nov 2023 (#42539)Nichols A. Romero1-0/+5
2024-02-13pdt: add aocc support (#42634)Alex Richert1-1/+1
2024-02-13py-py-tes: add new package (#42531)Maciej Wójcik1-0/+24
* py-py-tes: add new package * py-py-tes: add constraint on Python
2024-02-13khmer: new package @2.1.1 (#42450)George Young1-0/+32
* khmer: new package @2.1.1 * rationalising patch * adding dep, modifying patch * Update var/spack/repos/builtin/packages/khmer/package.py Indeed! Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-13possvm: new package @1.2 (#42516)George Young3-0/+79
* possvm: new package @1.2 * black! * appeasing flake8 * Updating commit ID * Adding graphing dep * Update var/spack/repos/builtin/packages/py-markov-clustering/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-13py-pysftp: add new package (#42525)Maciej Wójcik1-0/+18
* py-pysftp: add new package * py-pysftp: correct version Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-13Adds the spack recipe for building the pynpm python package (#42582)Jeremy Fix1-0/+22
* Adds the spack recipe for building the pynpm python package * fix license header * Update var/spack/repos/builtin/packages/py-pynpm/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-13cellpose: new package @2.2.3 (#42403)George Young5-0/+152
* py-fastremap: new package @1.14.1 * py-pyqtgraph: new package @0.13.3 * py-roifile: new package @2024.1.10 * py-superqt: new package @0.6.1 * cellpose: new package @2.2.3 * Appeasing black ... * Dropping the cuda variant * Update var/spack/repos/builtin/packages/py-fastremap/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Adding python version dependency * Update var/spack/repos/builtin/packages/py-pyqtgraph/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pyqtgraph/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-roifile/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-superqt/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Adding missing dep & conflict * Appeasing black * Adding missing py- prefix for dep * Switching over to py-pyqt6 * Switching over to py-pyqt6 --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-13py-biobb-structure-checking: new package (#42580)Dani1-0/+26
* new builtin package: py-biobb-structure-checking * Update var/spack/repos/builtin/packages/py-biobb-structure-checking/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * dependencies are also build dependencies --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-13new builtin package: py-biobb-io (#42451)Dani1-0/+23
* new builtin package: py-biobb-io * Update var/spack/repos/builtin/packages/py-biobb-io/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2025-03-10 08:31:58 +0000