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2015-12-30Revert "removing check as it can cause failures in zsh"Todd Gamblin5-206/+38
This reverts commit 496e4856916cb881da916539635e9bfa3e1406af. Undo overly large set of changes -- LLVM wasn't ready. Tom can recommit just the zsh stuff.
2015-12-30removing check as it can cause failures in zshTom Scogland5-38/+206
2015-12-29Merge pull request #285 from trws/args-checkTodd Gamblin1-5/+4
fix for array handling in ancient bash
2015-12-29fix for array handling in ancient bashTom Scogland1-5/+4
fixes #284
2015-12-26Merge pull request #277 from LLNL/bugfix/vcs-mirror-fetchTodd Gamblin2-16/+41
Fix #85 and #228: errors fetching VCS packages from a mirror.
2015-12-24Merge pull request #211 from LLNL/bugfix/github-154Todd Gamblin1-11/+29
Fix #154 -- better log messages for do_patch()
2015-12-24Fix #154 -- better log messages for do_patch()Todd Gamblin1-11/+29
2015-12-23Fix #85 and #228: errors fetching VCS packages from a mirror.Todd Gamblin2-16/+41
- Stage and fetcher were not being set up properly when fetching using a different fetch strategy than the default one for the package. - This is fixed but fetch/stage/mirror logic is still too complicated and long-term needs a rethink. - Spack will now print a warning when fetching a checksum-less tarball from a mirror -- users should be careful to use https or local filesystem mirrors for this.
2015-12-23Merge pull request #276 from LLNL/bugfix/235-smarter-spiderTodd Gamblin4-82/+183
Fix #235: Smarter web spidering -- use parsed links instead of recons…
2015-12-23Fix #235: Smarter web spidering -- use parsed links instead of reconstructing.Todd Gamblin4-82/+183
- Move `find_versions_of_archive` from spack.package to `spack.util.web`. - `spider` funciton now just uses the link parsing it already does to return links. We evaluate actual links found in the scraped pages instead of trying to reconstruct them naively. - Add `spack url-parse` command, which you can use to show how Spack interprets the name and version in a URL.
2015-12-22Fix bug in URL regex.Todd Gamblin1-1/+1
2015-12-22revert accidental print statements.Todd Gamblin1-5/+0
2015-12-22More consistent URL parsing when finding versions.Todd Gamblin2-4/+10
Versions found by wildcard URLs are different from versions found by parse_version, etc. The wildcards are constructed more haphazardly than the very specific URL patterns in url.py, so they can get things wrong. e.g., for this URL: https://software.lanl.gov/MeshTools/trac/attachment/wiki/WikiStart/mstk-2.25rc1.tgz We miss the 'rc' and only return 2.25r as the version if we ONLY use URL wildcards. Future: Maybe use the regexes from url.py to scrape web pages, and then compare them for similarity with the original URL, instead of trying to make a structured wildcard URL pattern? This might yield better results.
2015-12-22Merge pull request #257 from eschnett/eschnett/hwloc-1.11.2Todd Gamblin2-1/+9
Update hwloc; don't require libpciaccess on OS X
2015-12-22Merge pull request #269 from eschnett/eschnett/rsync-3.1.2Todd Gamblin1-0/+1
Update rsync to 3.1.2
2015-12-22Update rsync to 3.1.2Erik Schnetter1-0/+1
2015-12-22Skip installing libpciaccess on DarwinErik Schnetter2-2/+8
2015-12-22Update hwloc; don't require libpciaccess on OS XErik Schnetter1-2/+4
- hwloc 1.11.2 is available. - libpciaccess is not supported on OS X; don't require it there.
2015-12-22Merge pull request #266 from LLNL/bugfix/python3-setuptools-conflictTodd Gamblin1-3/+8
fix conflict with setuptools and cached pyc files
2015-12-22fixed site pyc regular expressionGregory L. Lee1-1/+1
2015-12-22Merge pull request #261 from LLNL/features/prefer-versions-in-packagesTodd Gamblin2-3/+10
Add ability to prefer particular versions in packages.
2015-12-22only ignore cached site.py fileGregory L. Lee1-2/+1
2015-12-22Merge pull request #263 from nolta/hdf5-mpiTodd Gamblin1-4/+2
fix non-mpi hdf5 package build
2015-12-22Merge pull request #264 from nolta/typosTodd Gamblin2-2/+2
fix a few comment typos
2015-12-22Merge branch 'nolta-249' into developTodd Gamblin1-3/+12
2015-12-22Slightly more robust tmp directory search.Todd Gamblin1-4/+12
- remove getcwd() check (seems arbitrary -- if users set their TMPDIR to this why stop them?) - try a number of common locations and try per-user directories in them first.
2015-12-22Merge pull request #265 from epfl-scitas/packages/valgrindTodd Gamblin1-0/+55
valgrind : added package
2015-12-22fix conflict with setuptools and cached pyc filesGregory L. Lee1-2/+8
2015-12-22valgrind : added packagealalazo1-0/+55
2015-12-21fix a few comment typosMike Nolta2-2/+2
2015-12-21fix non-mpi hdf5 package buildMike Nolta1-4/+2
Fixes a couple of issues in c5b7eba45743ebd131233c035101a0e64bb0c1c7.
2015-12-21fix #249 (tmp spack-stage directories conflict)Mike Nolta1-2/+3
2015-12-21Add ability to prefer particular versions in packages.Todd Gamblin2-3/+10
- Adding `preferred=True` to a version directive will change its sort order in concretization. - This provides us a rudimentary ability to keep the Spack stack stable as new versions are added. - Having multiple stacks will come next, but this at least allows us to specify default versions of things instead of always taking the newest.
2015-12-21new python versionsGregory L. Lee1-0/+2
2015-12-21remove numpy compiler patchGregory L. Lee1-7/+0
2015-12-21Merge pull request #208 from epfl-scitas/features/resource_directiveTodd Gamblin8-41/+287
resource directive : implementation + clang / llvm use case
2015-12-21Merge pull request #215 from sjtbham/developTodd Gamblin1-3/+18
fix build to work against depends for modules created by setup.py and…
2015-12-20Merge pull request #255 from LLNL/bugfix/254-libtool-compiler-name-issuesTodd Gamblin23-15/+77
Fix #254: libtool & distutils want certain compiler names.
2015-12-20Merge pull request #231 from epfl-scitas/packages/scotchTodd Gamblin1-14/+100
scotch: adding dependencies + variants for mpi, shared, compression and esmumps
2015-12-20Merge pull request #251 from epfl-scitas/packages/tauTodd Gamblin6-63/+226
Improved build of tau and related dependencies
2015-12-20tau : scorep is now a variantalalazo1-3/+6
2015-12-20removing completely the write_make_inc functionNicolas Richart1-7/+3
2015-12-20moving write_make_inc into a patch functionNicolas Richart1-1/+4
2015-12-19Merge pull request #109 from justintoo/add-package-spotTodd Gamblin1-0/+18
(Package) Add Spot C++ library (v1.99.3)
2015-12-19Merge pull request #226 from epfl-scitas/packages/mpichesTodd Gamblin2-5/+38
mpich, mvapich2: changes the filter for the wrappers mpi{cc, cxx, f77, fc}
2015-12-19Merge pull request #227 from trws/fetch-depsTodd Gamblin4-4/+25
fetch: add options to fetch missing or all deps
2015-12-19Merge pull request #230 from nolta/fix-env-mod-sys-typeTodd Gamblin2-6/+12
fix environment module path when $SYS_TYPE isn't defined
2015-12-19Merge branch 'pull/256' into developTodd Gamblin5-11/+25
2015-12-19Fix empty format strings in some packages.Todd Gamblin3-8/+6
2015-12-19Fix stale code in python version test so that it actually works.Todd Gamblin2-5/+2
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