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2019-12-08Add new py-asserts package (#14038)Adam J. Stewart1-0/+21
2019-12-07py-brian2: py-nosetests -> py-nose (#14037)Adam J. Stewart1-17/+20
2019-12-07polymake: fix dependency name (#14034)Adam J. Stewart1-1/+1
2019-12-07Add py-jupyter package (#14035)Adam J. Stewart1-0/+22
2019-12-07Add new py-wxmplot package (#14036)Adam J. Stewart1-0/+24
2019-12-07Add new py-stestr package (#14029)Adam J. Stewart1-0/+18
2019-12-07Add new py-testrepository package (#14030)Adam J. Stewart1-0/+28
2019-12-07Add new py-testresources package (#14031)Adam J. Stewart1-0/+18
2019-12-07Add new py-testscenarios package (#14032)Adam J. Stewart1-0/+17
2019-12-07Add new py-testtools package (#14033)Adam J. Stewart1-0/+17
2019-12-07Add new py-python-subunit package (#14028)Adam J. Stewart1-0/+19
2019-12-07Add New package feh and supporting packages (#14013)Quinn8-0/+240
* Adding libid3tag package for supporting feh * Adding libexif package for supporting feh * Adding imlib2 package for supporting feh * Adding the feh package * Rewording the cleanup function for libid3tag * Fixing some flake8 issues for imlib2 and libid3tag * Adding sources for the patches and swapping rm for os.remove * Flake8 fixes * swapping md5sums for sha256sums
2019-12-07Add new py-hacking package (#14027)Adam J. Stewart1-0/+19
2019-12-07Add new py-fixtures package (#14026)Adam J. Stewart1-0/+17
2019-12-07Add new py-extras package (#14025)Adam J. Stewart1-0/+18
2019-12-07Add py-tox package (#14024)Adam J. Stewart1-0/+26
2019-12-07Add latest version of py-importlib-metadata (#14023)Adam J. Stewart1-8/+10
2019-12-07flann: fix missing dependencies (#14022)Adam J. Stewart1-2/+2
2019-12-07votca*: add v1.6_rc1 (#14017)Christoph Junghans6-10/+79
* votca*: add v1.6_rc1 * votca: prefer v1.5.1
2019-12-07openPMD-api: 0.10.1 (#14018)Axel Huebl1-0/+1
Add the latest release of openPMD-api.
2019-12-06Spec Header Dirs: Only first include/ (#13991)Axel Huebl3-4/+17
* CUDA HeaderList: Unit Test * Spec Header Dirs: Only first include/ Avoid matching recurringly nested include paths that usually refer to internally shipped libraries in packages. Example in CUDA Toolkit, shipping a libc++ fork internally with libcu++ since 10.2.89: `<prefix>/include/cuda/some/more/details/include/` or `<prefix>/include/cuda/std/detail/libcxx/include` regex: non-greedy first match of include Co-Authored-By: Massimiliano Culpo <massimiliano.culpo@gmail.com> * CUDA: Re-Enable 10.2.89 as Default
2019-12-06ibm-java: add version 8.0.6.0 (#14003)Mark W. Krentel1-9/+16
* ibm-java: add version 8.0.6.0 Add version 8.0.6.0 and remove 8.0.5.30. IBM is fairly aggressive about removing old versions, and 8.0.5.30 is no longer available from their download site. * Restore version 8.0.5.30, although it is no longer available for download from IBM.
2019-12-06Packages/py-maestrowf (#14010)Francesco Di Natale1-1/+13
* Addition of repository branches to maestrowf. * Addition of 1.1.5dev pre-release. * Correction of a merge conflict. * Addition of Maestro release 1.1.5 * Addition of Maestro release 1.1.6 (removal of 1.1.5) * Sets 1.1.6 to the preferred version. Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Tweak to the url to point to latest.
2019-12-06Add py-parameterized package (#14016)Adam J. Stewart1-0/+17
2019-12-06Update py-theano dependencies (#14015)Adam J. Stewart1-3/+4
2019-12-06mesquite: fix build of the no mpi variant. (#14012)nicolas le goff1-3/+8
* mesquite: fix build of the no mpi variant. * mesquite: added the --without-mpi option to configure.
2019-12-06docs: Alphabetize create cmd template options (#13993)Tamara Dahlgren1-1/+2
* Bugfix: Display template options for create command. * Alphabetize "spack create" template options for readability * Revert template choices format; alphabetize list * flake8 fix
2019-12-06Bugfix: spack find -p fails in environment (#13972)Greg Becker3-1/+26
* force spack find -p to print abstract specs without prefixes * hashes have the same issue; improve handling of find -L to match find -l
2019-12-06[Package: HPX] Fix Apex and OTF2 support (#13982)Teodor Nikolov2-1/+89
* Fix Apex and OTF2 support - Comment out apex as a dependncy: it is bundled with HPX. - Apply a patch to v1.3.0 to correctly build with APEX. - Add otf2 as a dependency when APEX is enabled. * Remove depends_on('apex')
2019-12-06augustus: Set compile commands for each compiler and Fix for using 'boost' ↵t-karatsu1-0/+25
on Spack (#13975) * augustus: Set compile commands for each compiler and Fix for using 'boost' on Spack * fix for flake8 * delete 'string' args * Fix args of filter_file func * Fix args of other filter_file func
2019-12-06Add patch to fix issue building current llvm develop master on power9 (#13986)Galen Shipman2-0/+19
* Add patch to fix issue building current llvm develop master on power9 * Conform to proper block commenting Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-12-06Fastmath: Added required version (#13990)Tamara Dahlgren1-1/+3
* Fastmath: Added required version * Changed the version to 'latest' (per balay).
2019-12-06Ceed: Added required version (#14006)Tamara Dahlgren1-0/+2
2019-12-06sz: Change optimization flags for Fujitsu compiler (#14007)t-karatsu2-0/+15
2019-12-06Specify self for internal setup method (#14008)Paul1-4/+4
2019-12-06Convert llvm Spackage to use the monorepo (#11392)Brian Homerding5-534/+135
* [WIP] Convert llvm spackage to use the monorepo * Correcting python dependencies * Adding develop version for llvm monorepo * Python 2.6 Fix * Build Flang fork in a different root_cmakelists_dir * Formatting Fix * Including flang package changes * Removing explicit llvm dependencies variants * flake8 fix * Updating patches and llvm+flang logic * Updating env setup API * Add top level git * Conflicting flang variant with other variants
2019-12-06Add h5sh python package (#14001)Seth R. Johnson1-0/+25
* Add h5sh package * Fix requirements and update version
2019-12-06docs: Minimal BundlePackage build system doc (#13992)Tamara Dahlgren2-0/+53
* Minimal BundlePackage build system doc * Add link to new bundlepackage file * Fixed link bug and added create command example
2019-12-05hpcviewer: add version 2019.09 (#14004)Mark W. Krentel1-7/+10
Add version 2019.09. Adjust the iteration through versions to eliminate the need for version_list.
2019-12-05Add new TensorFlow package (#13112)Dominik Dold19-43/+978
* add tensorflow Change-Id: Id778c68d148cc42f0b478a9d10a8f937cb54cdc6 * make bazel and tensorflow build Change-Id: Iae9005e8f4dcc8f1ed36ea9337d2430aeebb291f * fix flake8 Change-Id: Ib05529dd796eab4a8855a5d7775cc4efea8e479d * 2nd flake8 attempt Change-Id: I46224be3a374b2a65793048b0c5178ea64adbd78 * replace md5 sums with sha256 * add version 1.13.2 * bazel() -> bazel('build',... * specify versions of bazel dependency * build with CUDA * add TODOs * add more todo"s * improve enum34 dependency * py-future is a dependency as of v1.14 * Update var/spack/repos/builtin/packages/tensorflow/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/tensorflow/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/tensorflow/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/tensorflow/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * enable nccl, cuda by default * explain patches * add todo * remove unnecessary copt_flag * use join * join argument must be an iterable * split long line; use same opts for non-cuda build * without opt flags, configure hangs * introduce build phases; re-arrange * undo mistake * restore unset tmp_path * as of v1.14, nccl_install_path is parsed correctly, hence change ...prefix.lib to ...prefix * now, version 1.14 compiles successfully with cuda * add version 2.1.0 * specify bazel dependency for version 2.1.0-rc0 * account for deprecated bazel opts for v2.1.0-rc0 * disable mkldnn contraction kernel * Flake8 fixes * md5 -> sha256 * Fix TF and TF-estimator version deps * Don't just comment out patch * Add myself as a maintainer * Patch py-astor to support newer py-setuptools * Add more versions and bazel version constraints * Add a build phase * Add note about configure interactivity * dev-build -> build-env * Disable iOS build * Use correct optimization flags * Add variants for all possible features * nccl isn't always a dependency * Specify correct dependency versions for each release * Libs may not be in lib or lib64 * Add py-opt-einsum package * Add newer version of py-protobuf * Add newer version of py-wrapt * Fix Python 2.6 syntax error * Code review * Set more env vars for older versions * Add more env vars, fix bazel versions, add conflicts * Fix config options * Specify version that support --config args * Add py-future dependency for Python 2 * Fix cuda config flag and compute capabilities * Fix installation on macOS, add unit tests * Override cuda variant default to True on non-macOS * Rename tensorflow to py-tensorflow * Has to extend something * Fix os.symlink call * convert cuda_arc values to capabilities * restore nccl prefix path for v1.13.1 * Revert to v2 * Remove extraneous period * Add new version of jdk/openjdk * More stable cuda_arch formatting * Fix bazel unit tests * Fix symlinking * Fix unit tests * +gcp by default until build error figured out
2019-12-05cdash: fix reporting issue with python 3Scott Wittenburg1-1/+4
2019-12-05paraview: Adjust python version constraints (#13999)Chuck Atkins1-2/+2
py-matplotlib: No constraint necessary for py3 but py2 has an upper bound py-numpy: No constraint necessary for py3 but py2 has an upper bound
2019-12-05Added go 1.13.5 and 1.12.14 (#13997)Paul1-0/+2
2019-12-05py-pillow: allow older versions to build with python 3.4 (#14000)Chuck Atkins1-1/+2
2019-12-05eospac: fix url (#13998)Christoph Junghans1-8/+8
2019-12-05New package: swipl (#13978)Alexander Knieps1-0/+71
* New package: swipl * Removed boilerplate, added maintainer * Fixed python 2 incompatibility * Update var/spack/repos/builtin/packages/swipl/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * swipl: Added conflict with intel compiler
2019-12-04patching: do strict version range checking (#13989)Peter Scheibel5-2/+23
* apply strict constraint checks for patches, otherwise Spack may incorrectly treat a version range constraint as satisfied when mixing x.y and x.y.z versions * add mixed version checks to version comparison tests
2019-12-04Merge tag 'v0.13.2' into developTodd Gamblin1-0/+40
v0.13.2 This release contains major performance improvements for Spack environments, as well as some bugfixes and minor changes. * allow missing modules if they are blacklisted (#13540) * speed up environment activation (#13557) * mirror path works for unknown versions (#13626) * environments: don't try to modify run-env if a spec is not installed (#13589) * use semicolons instead of newlines in module/python command (#13904) * verify.py: os.path.exists exception handling (#13656) * Document use of the maintainers field (#13479) * bugfix with config caching (#13755) * hwloc: added 'master' version pointing at the HEAD of the master branch (#13734) * config option to allow gpg warning suppression (#13744) * fix for relative symlinks when relocating binary packages (#13727) * allow binary relocation of strings in relative binaries (#13724)
2019-12-04update CHANGELOG.md for 0.13.2v0.13.2Todd Gamblin1-0/+40
2019-12-05Add py-matplotlib 3.1.2 (#13994)Adam J. Stewart1-1/+2
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