summaryrefslogtreecommitdiff
AgeCommit message (Collapse)AuthorFilesLines
2018-04-17Package/geopm (#7560)Matthias Maiterth3-0/+181
* geopm: Added initial files for package geopm and py-natsort dependency * geopm: Updated variants for hwloc and mpi defaults * geopm: Cleaned up unwanted hyphenation in description. * geopm: updates according to change request. * geopm: Updated minor change requests. Clarification for ruby-ronn dependency included as a TODO. This requires changes in the current configure and build process which will be changed in a future version. * geopm: changed to AutotoolsPackage and fixed hwloc The changes for hwloc required to add a specific version bc of a conflicting version of openmpi's hwloc dependency being below 1.99. This works but updates to this package should check if this restriction is still required. (Thus TODO added) * geopm: Added link dependencies (thanks for pointing this out). Also removed empty line below class definition. * geopm: Fixed depends_on according to package guide. Removed wrong type 'run' and removed types for numactl, mpi and hwloc to use default build & link type. * geopm: Fixed and updated +doc dependencies new pacakge ruby-ronn (package specified as in ruby-narray package) Updated second +doc dependency doxygen. * geopm: Changed args for Autotools specific feature. Added enable_or_disable and with_or_without instead of if cascade. Added overhead variant. Also added missing dependency (default: build&link) for json-c).
2018-04-17glvis@3.3: new package (#7166)Geoffrey Oxberry4-0/+163
* glvis@3.3: new package * mesa-glu: now provides 'glu' (GL Utility library) * openglu: add package, provides glu * [GLVis] Use MakefilePackage as base. Add 'develop' version. Small tweaks in the makefile arguments. * [GLVis] Locate the X11, GL and GLU libraries within their respective prefixes. Set the C compiler in the makefile arguments. * [GLVis] Fix a bug: the same variable was used for two different things. * [libx11] Add the libs property * [OpenGL] Add the libs property * [OpenGLU] Add the libs property * [GLVis] Use the libs properties of libx11, opengl, and openglu
2018-04-17Activation of activated package just msg's (#7752)George Hartzell1-1/+2
Activating a package that is already activated now sends a `tty.msg` and returns. ``` -bash-4.2$ ~/spack/bin/spack activate aspell6-en ==> Package aspell6-en/lc4v24f is already activated. ```
2018-04-17r-biocgenerics: package update (#7778)Matteo Guglielmi1-1/+2
2018-04-17r-genomeinfodb: package update (#7781)Matteo Guglielmi1-1/+2
2018-04-17Better error message for spack providers (#7748)Massimiliano Culpo3-7/+116
* Better error message for spack providers fixes #1355 `spack providers` now outputs a sensible error message if non-virtual specs are provided as arguments: ``` $ spack providers mpi zlib petsc ==> Error: non-virtual specs cannot be part of the query [zlib, petsc] ``` Formatting of the output changed slightly. * Calling 'spack providers' without arguments print the virtual pkg list Also, the error message in case of a wrong parameter has been improved to show the list of valid packages. * Avoid printing headers if stdout is not a tty * The provider list is formatted with colify if not in a tty * Added a test to check the list of providers returned from the command
2018-04-17r-htmltable: package update (#7767)Matteo Guglielmi1-3/+5
* r-htmltable: package update * r-htmltable: dependency fix * r-htmltable: dependency fix #2 * r-htmltable: dependency fix #3
2018-04-16ospac: fix compiler usage and install (#7776)Christoph Junghans1-1/+10
2018-04-16miniasm: new package (#7772)Yifan Zhu1-0/+39
2018-04-16fermikit: new package (#7775)Yifan Zhu1-0/+39
2018-04-16r-limma: package update (#7763)Matteo Guglielmi1-1/+2
* r-limma: package update * r-limma: dependency fix
2018-04-16Add libcint version 3.0.11 (#7764)Michael F. Herbst1-0/+1
2018-04-16r-hmisc: package update (#7766)Matteo Guglielmi1-1/+2
2018-04-16r-data-table: package update (#7768)Matteo Guglielmi1-0/+1
2018-04-16r-matrix: package update (#7769)Matteo Guglielmi1-1/+2
2018-04-16r-deseq2: package update (#7770)Matteo Guglielmi1-1/+2
2018-04-16add version 2.0.9 to py-slurm-pipeline (#7771)healther1-0/+1
Change-Id: I6b597076b0740d65b8aeaebf95f459745b1b1503
2018-04-14votca-moo: removal (#7762)Christoph Junghans3-45/+0
votca-moo is now part of votca-ctp (see votca/ctp#93)
2018-04-14eospac: initial commit (#7761)Christoph Junghans1-0/+45
* eospac: initial commit * eospac: add stable version
2018-04-13perl-moose: Add versions 2.2007,2.2009,2.2010 (#7758)Eric1-0/+3
2018-04-13perl-devel-overloadinfo: Add version 0.005 (#7754)Eric1-0/+1
2018-04-13prank: Add version 170427 (#7755)Eric1-0/+1
2018-04-13tcl: Add version 8.6.8 (#7756)Eric1-0/+1
2018-04-13tk: Add version 8.6.8 (#7757)Eric1-0/+1
2018-04-13cray: add comment about module use in packages.yaml (#7751)Cameron Smith1-1/+8
This advises users to prefer `modules:` entries in `packages.yaml` on Cray.
2018-04-13Fix when_spec inheritance for extensions (#7746)becker331-1/+1
Popping the when spec from kwargs in the extends directive breaks class inheritance. Inheriting classes do not find their when spec. We now get the when spec from kwargs instead, leaving it to be found by any downstream package classes.
2018-04-13flux: changed default value for doc variant to False (#7749)Massimiliano Culpo1-1/+1
fixes #2095
2018-04-13libfabric: added v1.6.0 and v1.5.3 (#7742)Raghu Raja1-1/+3
2018-04-13Fix www.example.com homepages (#7744)Adam J. Stewart6-6/+6
2018-04-12py-illumina-utils: Create new package (#7745)Eric1-0/+43
* py-illumina-utils: Create new package * fix dependency types
2018-04-12 perl-contextual-return: Create new package (#7741)Eric1-0/+36
* perl-contextual-return: Create new package * perl-contextual-return: Fix homepage url
2018-04-12New package r-tmixclust (#7658)Yifan Zhu2-1/+50
* r-tmixclust: new package * r-cluster: hash changed * r-cluster: removed 2.0.6 and added the latest 2.0.7-1
2018-04-12UCX: update for release 1.3.0 (#7740)Howard Pritchard1-1/+2
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2018-04-12perl-perlio-utf8-strict: Create new package (#7738)Eric1-0/+34
2018-04-12supernova: new package (#7719)Yifan Zhu1-0/+65
* runing a test * supernova: new package * removed with working_dir line
2018-04-12Specify default providers for the glu virtual package. (#7733)Veselin Dobrev1-0/+1
2018-04-12perl-text-simpletable: Create new package (#7739)Eric1-0/+34
2018-04-12New package r-spem (#7657)Yifan Zhu3-0/+114
* r-truncnorm: new package added * r-solnp: new package added * r-spem: new package added * r-truncnorm: removed dependency r-testthat
2018-04-12perl-math-matrixreal: Create new package (#7737)Eric1-0/+37
2018-04-12fix dependencies for matplotlib@2.2.2 (#7735)healther2-0/+37
2018-04-12perl-want: Create new package (#7734)Eric1-0/+34
2018-04-12glu: new virtual package; openglu: new package (#7162)Geoffrey Oxberry2-0/+88
* mesa-glu: now provides 'glu' (GL Utility library) * openglu: add package, provides glu * openglu: add custom fetcher, remove nonsense url Change openglu package to look like the opengl package in GitHub PR * [OpenGLU] Fix a typo
2018-04-12opengl: make error throw on install, not fetch (#7063)Geoffrey Oxberry1-3/+35
* opengl: make error throw on install, not fetch * opengl: add configuration advice for darwin * opengl: add more versions of GL/OpenGL * opengl: improve documentation in comments * [OpenGL] Fix formatting
2018-04-12Fixes conflicts in OSX nightly tests (#7732)Massimiliano Culpo1-1/+1
fixes #7593 Unit tests on OSX are trying to concretize mpileaks, and they fail due to a conflict in the package: "%gcc@7.2.0:" conflicts with "elfutils@0.163" This solves the issue asking explicitly to concretize against elfutils@1.170
2018-04-11add package py-gdbgui (#7715)healther1-0/+43
* add package py-gdbgui Change-Id: I553e1e4c4f6385348190817199e05b25522b57b4 * fix alignment * add setuptool runtimedependency * add gdb run dependency
2018-04-11Package.provides account for v deps that are provided conditionally (#7716)Massimiliano Culpo2-1/+13
fixes #7705 Package.provides now checks constraints to ensure that a spec provides a given virtual package. Note that 'strict=True' is not passed to satisfies as this function is also used during concretization.
2018-04-11Add package py-slurm-pipeline (#7681)healther1-0/+41
* add package py-slurm-pipeline Change-Id: Iade405a7e96f04e476cea76e460cac2ebdf21f95 * add missing py-six dependency Change-Id: I382fa4139880c1a61af3f314c74ed6e7c2e88c5b * Update package.py * Update package.py * Update package.py * fix flake8
2018-04-11Add ANTs package (#7717)Simon Flood1-0/+48
* Add ants package Add a package for ANTs (version 2.2.0) * Update package.py * Update package.py * Update package.py * Update package.py * Update package.py
2018-04-11add package py-python-socketio (#7721)healther1-0/+43
* add package py-python-socketio * fix indention * add description to eventlet variant * fix dependencies Change-Id: I425ae165dfcce30df6cbbd671cd6ef1bef5078dc * Update package.py * Update package.py * Update package.py * Update package.py
2018-04-10py-cnvkit: add new package (#7688)peetsv1-0/+46
* py-cnvkit: add new package * updating dependencies * correcting flake8 error * adding py-setuptools dependency
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-08-18 21:25:16 +0000