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* Provide a newer doxygen version.
+ Also provide a patch that allows collaboration diagrams to work properly with
C++ std::shared_ptr<T>. Ref:
https://github.com/Sleepyowl/doxygen/commit/6c380ba91ae41c6d5c409a5163119318932ae2a3?diff=unified
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Clang has support for using different fortran compilers with the Clang executable.
Spack includes logic to select a compiler wrapper symlink which refers to the fortran executable (since some build systems depend on the name of the compiler, e.g. 'gfortran' or 'flang').
This selection was previously based on the architecture, and chose incorrectly in some situations (e.g. for clang/gfortran on Linux). This replaces architecture-based wrapper selection with a selection that is based on the name of the Fortran compiler executable.
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* Add the setting of CBTF_MPI_IMPLEMENTATION to the cbtf-krell
and openspeeedshop package files, so that the mpi implementation
can be found by the tool. This allows users to not have to
set this manually if only one mpi implementation is specified
in the build.
* Update version ranges for dependencies of cbtf packages
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* package_sanity: add test_no_fixme
* cleanup & better assert message
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Change dependency on llvm from >=6.0 to 6.0:6.99.
Refs #9667
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* GCC: constrain version 6, 7, and 8 to build with ISL version at
most 0.18
* GCC version 9 (not yet released) will be compatible with
ISL version 0.20 so future GCC releases are constrained to build
with ISL version at most 0.20
* ISL: Add v0.15, replace all md5 sums with sha256 sums for ISL
versions
* GCC versions before 6 were constrained to build with ISL 0.14
but have been confirmed to work with ISL 0.15
* GCC: Place an upper bound on GCC's mpfr dependency
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This eliminates duplicates for a couple options which are set
multiple times.
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* packages/phist: add variant 'fortran' to enable/disable building the Fortran bindings
* xsdk: add phist
* packages/xsdk: add a comment reg. updating phist dependency
* packages/phist: +fortran variant is only for versions 1.7:
* packages/phist: update comments
* xsdk: forgot to specify kernel library for phist (picked tpetra, assuming trilinos+tpetra will be installed)
* packages/phist: add variant 'openmp' to allow disabling OpenMP
* phist: fix compile error due to missing -lm
* flake8: fix warnings
* packages/phist: fix cmake flag: XSDK_ENABLE_Fortran (rather than XSDK_BUILD_Fortran)
* packages/phist: allow disabling building the scamac matrix generator (which causes trouble on some systems)
* packages/xsdk: disable scamac within phist because it caused problems for @balay and is not essential for now
* packages/phist: actually disable scamac via cmake if ~scamac
* phist: disable openmp from xsdk
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* REMOVED: -callr: updated to newest version, added sha256, added listurl
* r-rjags: updated
* r-rjags: fix new version
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* Constrain to build with CMake <= 3.9.6
* Specify installation prefix to match install prefix format of
other Spack python libraries
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* added package sentieon
* change file location
* updated spack header license and added license_vars
* fixed flake8 error
* fixed license header
* fix license header
* license
* added import os.path
* edits
* flake8 edits
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* orca: new package starting at 4.0.1.2
* orca: fix typo
* orca: fix boilerplate
* orca: reorder deps, add openmpi runtime dependency
* orca: license update
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This commit overhauls the libMesh package script in a number of ways:
* We now inherit from AutotoolsPackage.
* libMesh contains about a dozen third-party dependencies that can
only be provided by the copy bundled with libMesh. This patch
enumerates all such bundled dependencies and disables all of them
by default.
* libMesh supports compilation with external installations of boost,
eigen, hdf5, slepc, and tbb; this patch adds all of them to
package.py.
* libMesh will look for a few system executables (xz, bzip, gdb) by
default. This is now disabled.
* libMesh will now used a copy of perl installed by spack instead of
trying to find the system copy.
* Compilation with non-system MPI installations requires an additional
flag (--with-mpi=); this has been added.
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setup-env includes a call to 'ps' to determine what shell is being
used. 'ps' can be instructed to use a different default output format
via the 'PS_FORMAT' env variable. Thus unset this variable before
calling 'ps'.
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* octave: add 4.2.2, 4.4.0 and 4.4.1
* gnuplot: add 5.2.5
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- it was hard to distinguish all-gray filenames
- added rotating colors to `spack config blame`
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VisIt cannot use VTK built with mpi support (which was enabled by
default starting in #9494)
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Since kokkos only compiles a static library, the -fPIC compiler flag
is required to link kokkos into a Fortran executable
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Update versions and constraints on cmake and supported toolchains
(as stated by the documentation).
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* Unite Dockerfiles - add build/run/push scripts
* update docker documentation
* update .travis.yml
* switch to using a preprocessor on Dockerfiles
* skip building docker images on pull requests
* update files with copyright info
* tweak when travis builds for docker files are done
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- also remove analytics beacon in README, which is not that useful
anymore.
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The install() function in the miniconda2 & 3 package.py files referenced
self.url, which is hard-coded to 4.3.11. That's not necessary the
version that the user requested, though. Changed the install() function
to reference self.stage.archive_file. Also added a version string for
4.5.11.
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- Added v 5.0.2
- Added conflict with gcc 8 for versions that do not build
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5.6 (#9611)
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There is no checksum for r-getopt@1.19 and this package is compatible
with the latest version anyway.
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Move suite-sparse gcc version constraint from dealii to suite-sparse
package and update it (gcc 4.9 is required as of version 5.2.0 rather
than 5.1.0). The constraint is now expressed as a conflict rather
than a dependency.
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W503 and W504 are issued for line breaks before or after binary
operators (respectively). This allows either approach (explicitly
instructing flake8 to ignore both of these cases).
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