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2020-03-20update CHANGELOG.md for 0.14.1v0.14.1Todd Gamblin1-0/+12
2020-03-20version bump: 0.14.1Todd Gamblin1-1/+1
2020-03-20multiprocessing: allow Spack to run uninterrupted in background (#14682)Greg Becker2-47/+84
Spack currently cannot run as a background process uninterrupted because some of the logging functions used in the install method (especially to create the dynamic verbosity toggle with the v key) cause the OS to issue a SIGTTOU to Spack when it's backgrounded. This PR puts the necessary gatekeeping in place so that Spack doesn't do anything that will cause a signal to stop the process when operating as a background process.
2020-03-20Cray bugfix: TERM missing while reading default target (#15381)Greg Becker1-6/+8
Bug: Spack hangs on some Cray machines Reason: The TERM environment variable is necessary to run bash -lc "echo $CRAY_CPU_TARGET", but we run that command within env -i, which wipes the environment. Fix: Manually forward the TERM environment variable to env -i /bin/bash -lc "echo $CRAY_CPU_TARGET"
2020-03-20Upstreams: don't write metadata directory to upstream DB (#15526)Kai Germaschewski1-1/+1
When trying to use an upstream Spack repository, as of f2aca86 Spack was attempting to write to the upstream DB based on a new metadata directory added in that commit. Upstream DBs are read-only, so this should not occur. This adds a check to prevent Spack from writing to the upstream DB
2020-03-20Creating versions from urls doesn't modify class attributes (#15452)Massimiliano Culpo3-3/+3
fixes #15449 Before this PR a call to pkg.url_for_version was modifying class attributes determining different results for subsequents calls and an error when the urls was empty.
2020-03-20bugfix: fix install_missing_compilers option bug from v0.14.0 (#15416)Greg Becker1-0/+18
* bugfix: ensure bootstrapped compilers built before packages using the compiler
2020-03-20bugfix: installer.py shouldn't be executable (#15386)Todd Gamblin1-0/+0
This is a minor permission fix on the new installer.py introduced in #13100.
2020-03-20Add function replace_prefix_nullterm for use on mach-o rpaths. (#15347)Patrick Gartung1-3/+34
This recovers the old behavior of replace_prefix_bin that was modified to work with elf binaries by prefixing os.sep to new prefix until length is the same as old prefix.
2020-03-20ArchSpec: fix semantics of satisfies when not concrete and strict is true ↵Massimiliano Culpo2-0/+17
(#15319)
2020-03-20suite-sparse: fix installation for v5.X (#15326)Adam J. Stewart1-1/+2
fixes #15184 GraphBLAS depends on m4 according to CMake error message Do not use INSTALL= when compiling the library
2020-03-20testing: increase installer coverage (#15237)Tamara Dahlgren3-109/+280
2020-03-20bugfix: resolve undefined source_pkg_dir failure (#15339)Tamara Dahlgren2-8/+74
2020-03-20Bugfix: resolve StopIteration message attribute failure (#15341)Massimiliano Culpo2-1/+22
Testing the install StopIteration exception resulted in an attribute error: AttributeError: 'StopIteration' object has no attribute 'message' This PR adds a unit test and resolves that error.
2020-03-20Recover coverage from subprocesses during unit tests (#15354)Tamara Dahlgren5-16/+16
* Recover coverage from subprocesses during unit tests
2020-03-20Correct pytest.raises matches to match (#15346)Massimiliano Culpo3-10/+10
2020-03-20bugfix: Add dependents when initializing spec from yaml (#15220)Tamara Dahlgren2-11/+17
The new build process, introduced in #13100 , relies on a spec's dependents in addition to their dependencies. Loading a spec from a yaml file was not initializing the dependents. - [x] populate dependents when loading from yaml
2020-03-20Uniquify suffixes added to module names (#14920)Seth R. Johnson3-1/+4
2020-03-20bugfix: ensure proper dependency handling for package-only installs (#15197)Tamara Dahlgren3-17/+149
The distributed build PR (#13100) -- did not check the install status of dependencies when using the `--only package` option so would refuse to install a package with the claim that it had uninstalled dependencies whether that was the case or not. - [x] add install status checks for the `--only package` case. - [x] add initial set of tests
2020-03-20Fix for being able to 'spack load' packages that have been renamed. (#14348)Andrew W Elble2-1/+36
* Fix for being able to 'spack load' packages that have been renamed. * tests: add test for 'spack load' of a installed, but renamed/deleted package
2020-03-20modules: store configure args during build (#11084)Michael Kuhn4-11/+41
This change stores packages' configure arguments during build and makes use of them while refreshing module files. This fixes problems such as in #10716.
2020-03-20fetch_strategy: remove vestigial code (#15431)Greg Becker1-18/+0
2020-02-23update CHANGELOG.md for 0.14.0v0.14.0Todd Gamblin1-0/+97
2020-02-23version bump: 0.14.0Todd Gamblin4-1/+11713
2020-02-22Automatically run LLDB codesign script on mac (#15169)Seth R. Johnson1-5/+12
Newer versions of LLVM provide a one-line command to set up LLDB code signing. Now the build will abort only if this command fails. https://lldb.llvm.org/resources/build.html#code-signing-on-macos
2020-02-22add new package : brltty (#15161)darmac1-0/+30
2020-02-22add new package : audit-userspace (#15163)darmac1-0/+25
2020-02-22add new package : apachetop (#15164)darmac1-0/+27
2020-02-22add new package : advancecomp (#15166)darmac1-0/+24
2020-02-22add new package : acpid (#15167)darmac1-0/+28
2020-02-22lighttpd : fix pcre depends (#15168)darmac1-0/+2
2020-02-21Emit a sensible error message if compiler's target is overly specific (#14888)Massimiliano Culpo2-0/+33
* Emit a sensible error message if compiler's target is overly specific fixes #14798 fixes #13733 Compiler specifications require a generic architecture family as their target. This commit improves the error message that is displayed to users if they edit compilers.yaml and use an overly specific name.
2020-02-21sundials: add version 5.1.0 and trilinos variant (#15155)Cody Balos1-5/+50
* sundials: add version 5.1.0 and trilinos variant * sundials: add version 5.1.0 and trilinos variant
2020-02-21Changes necessary to build lbann@develop (#15153)Robert Blake1-2/+3
* Necessary changes to get lbann develop to compile. * Reformatting for flake8 * More flake8 changes. * Removing redundant clara dependency.
2020-02-21shtools: New package (#15133)Erik Schnetter1-0/+47
* shtools: New package * shtools: Convert to MakefilePackage, use Spack's generic compiler flags * shtools: Make function location explicit
2020-02-21Add extra version of py-jsonschema (#14993)iarspider2-3/+34
* Add extra version of py-jsonschema * Update dependencies * Update dependencies + flake8 * Add py-pyrsistent package * Update package.py * Update var/spack/repos/builtin/packages/py-jsonschema/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py * Update package.py * Apply suggestions from code review Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Apply suggestions from code review Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-02-21amrex: New version 20.02 (#15132)Erik Schnetter1-0/+1
2020-02-21Updating raja versions. (#15148)Robert Blake1-0/+3
2020-02-21Add clang compiler (#15152)Tim Haines1-0/+2
2020-02-21QE+QMCPACK Converter Update February 2020 (#15135)Nichols A. Romero2-8/+14
* Add a variant to QE that suppresses upstream patching. Need in order to do ddependency patching. * QE variant fails to build often. Set default variant to False as a user friendly change. * QMCPACK converter patch collides with internal QE patches. Deactivate internal patches when performing dependency patching. * Clearer description of QE patch variant that is also flake8 compliant.
2020-02-21Disable qt3d when opengl is disabled (#15149)Seth R. Johnson1-4/+11
* Disable qt3d when opengl is disabled * Remove `-skip qtquick3d` unless QT 5.14 Found while checking build of qt 5.14.
2020-02-21Add extra version of py-sqlalchemy (#15109)iarspider1-0/+8
* Add extra version of py-sqlalchemy * Update package.py * Update package.py * Update package.py * Update package.py * Update package.py * Apply suggestions from code review Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-02-20Updated installer module copyright (#15138)Tamara Dahlgren1-1/+1
Update the copyright for `installer.py`.
2020-02-20Add decentralized-internet package (#15129)Andrew Kamal1-0/+14
* Create package.py * Update package.py * Update package.py * Update package.py * Update package.py * Update var/spack/repos/builtin/packages/decentralized-internet/package.py Commit suggestion Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-02-20Restore package-related unsigned binary changes from PR 11107 (#15134)Tamara Dahlgren2-12/+21
Restore package-related unsigned binary changes from PR 11107
2020-02-20Package hashing: fix detection of directives (#14763)Peter Scheibel3-0/+46
The hashing logic looks for function calls that are Spack directives. It expects that when a Spack directive is used that it is referenced directly by name, and that the directive function is not itself retrieved by calling another function. When the hashing logic encountered a function call where the function was determined dynamically, it would fail (attempting to access a name attribute that does not happen to exist in this case). This updates the hashing logic to filter out function calls where the function is determined dynamically when looking for uses of Spack directives.
2020-02-20libf77zmq (#15125)Anthony Scemama1-0/+38
* libf77zmq * Cleaning mkdirp * Removed install function * Renamed to f77-zmq * Fixed Flake8 * Fixed Flake8
2020-02-20Add extra version of py-terminado (#15111)iarspider1-0/+2
* Add extra version of py-terminado * Update package.py * Update var/spack/repos/builtin/packages/py-terminado/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-02-20Add extra version of py-tornado; update dependencies (#15112)iarspider1-2/+5
* Add extra version of py-tornado * Update package.py * Update package.py * Update package.py
2020-02-20Add extra version of py-typing (#15113)iarspider1-0/+1
* Add extra version of py-typing * Update package.py * Fix typo * Update package.py
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