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2019-10-10tests: cleanup config:build_stage handling (fixes #12651, #12798)Tamara Dahlgren5-190/+119
2019-10-10Add support for nested "overrides" scopes.Tamara Dahlgren2-2/+72
2019-10-10Added NEON to the list of features required for the aarch64 familyMassimiliano Culpo2-0/+7
Both floating-point and NEON are required in all standard ARMv8 implementations. Theoretically though specialized markets can support no NEON or floating-point at all. Source: https://developer.arm.com/docs/den0024/latest/aarch64-floating-point-and-neon On the other hand the base procedure call standard for Aarch64 "assumes the availability of the vector registers for passing floating-point and SIMD arguments". Further "the Arm 64-bit architecture defines two mandatory register banks: a general-purpose register bank which can be used for scalar integer processing and pointer arithmetic; and a SIMD and Floating-Point register bank". Source: https://developer.arm.com/docs/ihi0055/latest/procedure-call-standard-for-the-arm-64-bit-architecture This makes customization of Aarch64 with no NEON instruction set available so unlikely that we can consider them a feature of the generic family.
2019-10-10ArchSpec: fix constraint satisfaction for targetsMassimiliano Culpo2-0/+9
fixes #13111 Due to a missing case we were treating a single target that was not equal to the one we were comparing to as a range open on the right.
2019-10-10Add patches and missing dependency to bash (#13084)Adam J. Stewart1-1/+22
2019-10-10Add mpfr 4.0.2 (#13091)Adam J. Stewart1-5/+8
2019-10-10Add tar 1.32 (#13099)Adam J. Stewart1-3/+11
2019-10-10sublime-text: New version, adapt install process (#13074)Jannek Squar1-6/+8
* Added new version, reworked installation process * Removed explicit addition to PATH
2019-10-10Add expat 2.2.9 (#13085)Adam J. Stewart1-5/+7
2019-10-10Add gettext 0.20.1 (#13086)Adam J. Stewart1-1/+2
2019-10-10Add isl 0.21 (#13087)Adam J. Stewart1-1/+3
2019-10-10Add libiconv 1.16 (#13088)Adam J. Stewart1-1/+2
2019-10-10Add libsigsegv 2.12 (#13089)Adam J. Stewart1-3/+4
2019-10-10Add latest openssl releases (#13092)Adam J. Stewart1-2/+5
2019-10-10Add latest Perl releases (#13093)Adam J. Stewart1-4/+5
2019-10-10Add pkgconf 1.6.3 (#13094)Adam J. Stewart1-4/+6
2019-10-10Add readline 8.0 (#13095)Adam J. Stewart1-1/+3
2019-10-10gdbm: https -> http (#13096)Adam J. Stewart1-1/+2
2019-10-10ncurses: https -> http (#13097)Adam J. Stewart1-1/+2
2019-10-10Add sqlite 3.30.0 (#13098)Adam J. Stewart1-0/+1
2019-10-10hypre: add compatibility patch for petsc/mfem build failures (#13116)Satish Balay2-0/+13
2019-10-10Added new versions to py-tornado (#13080)wspear1-1/+3
* Added new versions to py-tornado * Removed all but the latest new version
2019-10-10py-line-profiler: add 2.1.2, re-run cython if needed (#13102)Matthias Wolf1-1/+14
* py-line-profiler: add 2.1.2, re-run cython if needed See rkern/line_profiler#166. * Update var/spack/repos/builtin/packages/py-line-profiler/package.py Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-10-09libfabric: new upstream release 1.8.1 (#13053)Rob Latham1-0/+2
2019-10-09Added latest versions of SQLAlchemy 1.3.X, 1.2.X and 1.1.X (#13078)wspear1-1/+10
* Added latest versions of SQLAlchemy 1.3.X, 1.2.X and 1.1.X * Added missing dependencies
2019-10-09Added latest versions to py-traitlets (#13079)wspear1-1/+4
* Added latest versions to py-traitlets * Added missing dependencies
2019-10-09Add new versions of py-maestrowf (#13081)Francesco Di Natale1-2/+7
* Addition of 1.1.3 and 1.1.4 * Addition of conditional enum-34 installation. * Update var/spack/repos/builtin/packages/py-maestrowf/package.py Addition of versioning for pyyaml. Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Addition of enum34 back to older versions 1.1.3 and below.
2019-10-09qt: Add 5.13.1 and missing zlib flags (#13109)Michael Kuhn1-1/+5
2019-10-09Buildcache: pass string.encode('utf-8') for old_dir and new_dir to ↵Patrick Gartung1-1/+2
replace_prefix_bin. (#13114) This should fix a Python3 error from concatenating strings and bytes.
2019-10-09mysql: Add missing dependencies (#12717)Michael Kuhn1-2/+5
This also changes the default for cxxstd from 98 to 14 because (at least) newer versions of mysql do not compile with 98 (tested with gcc@9).
2019-10-09"No Spack mirror configured": demoted the warning to a debug message (#13082)Massimiliano Culpo1-1/+1
fixes #12010
2019-10-08perl-perlio-gzip: add zlib dependency. (#13060)Toyohisa Kameyama1-0/+6
2019-10-08psmc: add zlib dependency. (#13061)Toyohisa Kameyama1-0/+2
2019-10-08seqprep: add zlib dependency. (#13062)Toyohisa Kameyama1-0/+2
2019-10-08tabix: add zlib dependency. (#13064)Toyohisa Kameyama1-0/+1
2019-10-08Added py-certipy package. Dependency of py-jupyterhub. (#13068)wspear1-0/+19
* Added py-certipy package. Dependency of py-jupyterhub. * Changed url to pypi
2019-10-08QMCPACK Oct2019 fix buglets (#13069)Nichols A. Romero1-5/+11
* Support different CMake build types correctly. * LIBXML2 variables no longer used. * Fix E501 as part of https://github.com/spack/spack/pull/13069
2019-10-08Fixed hash of version .0.5 and added latest version (.0.7.1) (#13077)wspear1-2/+3
2019-10-08Build older openfoam (#13071)Mark Olesen2-19/+18
* adjust building of OpenFOAM 1806 and earlier - spack now unpacks into spack-src, but earlier OpenFOAM versions still expect particular directory names (eg, OpenFOAM-v1806). Resolve by creating a symlink during patching. * replace openfoam 1806 patch with URL version
2019-10-08Added py-pamela package. Dependency of py-jupyterhub. (#13075)wspear1-0/+17
2019-10-08Add headsup note re cryptsetup patch for v2.2.2 (#13076)George Hartzell1-0/+4
2019-10-08travis: bump python version for flake8 and build testsMassimiliano Culpo1-7/+7
2019-10-08pmdk: added v 1.7 (#13067)Phil Carns1-0/+1
2019-10-07Add macOS Catalina support (#13070)Adam J. Stewart1-12/+22
2019-10-07py-apipkg: Fix mix up of checksums (#13066)Oliver Breitwieser1-2/+2
Change-Id: Ibae329c5a6cf7e3741a879612da523e11e3b0ab9
2019-10-07Spack environments can concretize specs together (#11372)Massimiliano Culpo4-4/+171
This PR adds a 'concretize' entry to an environment's spec.yaml file which controls how user specs are concretized. By default it is set to 'separately' which means that each spec added by the user is concretized separately (the behavior of environments before this PR). If set to 'together', the environment will concretize all of the added user specs together; this means that all specs and their dependencies will be consistent with each other (for example, a user could develop code linked against the set of libraries in the environment without conflicts). If the environment was previously concretized, this will re-concretize all specs, in which case previously-installed specs may no longer be used by the environment (in this sense, adding a new spec to an environment with 'concretize: together' can be significantly more expensive). The 'concretize: together' setting is not compatible with Spec matrices; this PR adds a check to look for multiple instances of the same package added to the environment and fails early when 'concretize: together' is set (to avoid confusing messages about conflicts later on).
2019-10-07watch: added new package (#13044)Adam J. Stewart1-0/+49
2019-10-06Added go 1.13.1 and 1.12.10 (#12977)Paul1-0/+2
2019-10-06gnuplot: add 5.2.7 and fix qt dep (#13058)Denis Davydov2-1/+3
2019-10-06freeimage: new package (#13049)Matthias Wolf2-0/+40
* freeimage: new package * Address comments. * Whitespace
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