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2019-10-15lmod: module files are written in a root folder named by target family (#13121)Massimiliano Culpo3-1/+22
fixes #13005 This commit fixes an issue with the name of the root directory for module file hierarchies. Since #3206 the root folder was named after the microarchitecture used for the spec, which is too specific and not backward compatible for lmod hierarchies. Here we compute the root folder name using the target family instead of the target name itself and we add target information in the 'whatis' portion of the module file.
2019-10-15arborx: update v0.8-beta to v0.8-beta2 (#13143)Andrey Prokopenko1-8/+9
- Require Kokkos with c++14 - Update the case of CMake options
2019-10-15kokkos: add cxxstd variant (#13142)Andrey Prokopenko1-1/+10
2019-10-14Add version 0.177 of elfutils (#13129)Tim Haines1-1/+2
* Add version 0.177 * Fix spacing
2019-10-14ntpoly: Define module directry when compiling with Fujitsu compiler. (#13120)t-karatsu1-0/+3
* ntpoly: Define module directry when compiling with Fujitsu compiler. * Delete quotes.
2019-10-14filter_file uses "surrogateescape" error handling (#12765)Massimiliano Culpo5-6/+1602
From Python docs: -- 'surrogateescape' will represent any incorrect bytes as code points in the Unicode Private Use Area ranging from U+DC80 to U+DCFF. These private code points will then be turned back into the same bytes when the surrogateescape error handler is used when writing data. This is useful for processing files in an unknown encoding. -- This will allow us to process files with unknown encodings. To accommodate the case of self-extracting bash scripts, filter_file can now stop filtering text input if a certain marker is found. The marker must be passed at call time via the "stop_at" function argument. At that point the file will be reopened in binary mode and copied verbatim. * use "surrogateescape" error handling to ignore unknown chars * permit to stop filtering if a marker is found * add unit tests for non-ASCII and mixed text/binary files
2019-10-14bugfix: install --only dependencies works in env (#13090)Greg Becker4-19/+73
* bugfix: install --only dependents works in env includes regression testing
2019-10-14py-petsc4py: add version 3.12.0 (#13209)Satish Balay1-1/+3
* py-petsc4py: add version 3.12.0 * fix typo wrt maintainer
2019-10-14Complete cleanup of the adios2 package configuration (#13107)William F Godoy1-53/+49
Provide up to date specs for build options Remove non-production versions Format using autopep8 and flake8 Separate cmake options in adios2 2.4.0 version Keep default as True as much as possible Support for Python 2 and 3 for adios2 versions <= 2.4.0 Starting v2.5.0 only Python 3 is supported Addressing review suggestions
2019-10-14New ACTS versions (#12484)Hadrien G1-6/+9
* Add new ACTS releases * Update ACTS dependency requirements * We can actually be more specific here * The material plugin is gone as of ACTS v0.10.0 * Add 0.10.4 release * Remove material mapping plugin It was merged into core as of 0.10.x, and given ACTS' youth it is unlikely to have actual users at this point in time.
2019-10-14py-pymongo: added new package at version 3.9.0 (#13132)wspear1-0/+24
2019-10-14commands: add resource stats to `spack url stats` (#13205)Todd Gamblin2-65/+93
`spack url stats` now also looks at packages' resources when outputting statistics. Example: ``` $ spack url stats ==> URL stats for 3531 packages: -------------------------------------------------------------- stat versions % resources % -------------------------------------------------------------- url 8335 89.3% 339 89.0% schemes https 6489 69.5% 93 24.4% ftp 32 0.3% 8 2.1% http 1763 18.9% 237 62.2% file 51 0.5% 1 0.3% checksums md5 26 0.3% 0 0.0% sha256 8306 89.0% 336 88.2% no checksum 3 0.0% 3 0.8% -------------------------------------------------------------- go 1 0.0% 0 0.0% -------------------------------------------------------------- hg 7 0.1% 0 0.0% -------------------------------------------------------------- no code 4 0.0% 0 0.0% -------------------------------------------------------------- svn 4 0.0% 16 4.2% -------------------------------------------------------------- git 981 10.5% 26 6.8% branch 442 4.7% 4 1.0% commit 362 3.9% 14 3.7% no ref 36 0.4% 2 0.5% tag 141 1.5% 6 1.6% -------------------------------------------------------------- ```
2019-10-14py-alembic: fixed missing dependencies. (#13127)wspear1-0/+4
2019-10-14dialign: added new package at version 2.2.1 (#13130)Jeffrey Salmond1-0/+28
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
2019-10-14py-smart-open: new package at 1.8.4 (#13135)Justin S1-0/+21
2019-10-14Fix svn tests, skip if svnadmin not found (#13137)Adam J. Stewart2-2/+4
2019-10-14py-python-memcached: added new package at version 1.59 (#13133)wspear1-0/+21
* Added package py-python-memcached, a dependency of python-oauth2 * Fixed line lengths
2019-10-14py-redis: added new package at version 3.3.8 (#13134)wspear1-0/+18
2019-10-13Add py-kiwisolver 1.1.0 (#13170)Adam J. Stewart1-1/+3
2019-10-13amrex: add version 19.10 (#13206)Satish Balay1-0/+1
2019-10-13slepc: use spack specified python in configure (#13207)Satish Balay1-1/+1
2019-10-13omega-h: add version 9.29.0 (#13208)Satish Balay1-0/+1
2019-10-13Add apr-util 1.6.1 (#13145)Adam J. Stewart1-1/+2
2019-10-13Add apr 1.7.0 (#13146)Adam J. Stewart1-1/+2
2019-10-13Add bison 3.4.2 (#13147)Adam J. Stewart1-2/+3
2019-10-13Add freetype 2.10.1 (#13149)Adam J. Stewart1-5/+6
2019-10-13Add libpng 1.6.37 (#13153)Adam J. Stewart1-16/+7
2019-10-13Add lz4 1.9.2 (#13155)Adam J. Stewart1-5/+6
2019-10-13Add mercurial 5.1.2 (#13156)Adam J. Stewart1-5/+14
2019-10-13Add subversion 1.12.2 (#13158)Adam J. Stewart1-53/+73
2019-10-13Add py-attrs 19.2.0 (#13163)Adam J. Stewart1-1/+3
2019-10-13Add py-cython 0.29.13 (#13166)Adam J. Stewart1-13/+15
2019-10-13Add py-docutils 0.15.2 (#13167)Adam J. Stewart1-2/+11
2019-10-13Add py-joblib 0.14.0 (#13169)Adam J. Stewart1-1/+4
2019-10-13Add py-more-itertools 7.2.0 (#13171)Adam J. Stewart1-2/+7
2019-10-13Add py-pillow 6.2.0 (#13175)Adam J. Stewart1-19/+15
* Add py-pillow 6.2.0 * Flake8 fix
2019-10-13Add py-py 1.8.0 (#13177)Adam J. Stewart1-1/+2
2019-10-13Add py-pyflakes 2.1.1 (#13178)Adam J. Stewart1-1/+3
2019-10-13Add py-pygments 2.4.2 (#13179)Adam J. Stewart1-1/+7
2019-10-13Add py-pyparsing 2.4.2 (#13180)Adam J. Stewart1-1/+3
2019-10-13Add py-pytz 2019.3 (#13182)Adam J. Stewart1-1/+2
2019-10-13Add py-setuptools-scm 3.3.3 (#13183)Adam J. Stewart1-1/+2
2019-10-12gmp: fix make check on catalina (#13201)Adam J. Stewart1-5/+10
2019-10-12mpfr: fix make check on catalina (#13200)Adam J. Stewart1-0/+7
2019-10-12Fix external numpy package support (#13197)Adam J. Stewart1-2/+2
2019-10-12Add py-setuptools 41.4.0 (#13184)Adam J. Stewart1-0/+1
2019-10-12Add py-pytest 5.2.1 (#13181)Adam J. Stewart1-2/+3
2019-10-12Add py-pluggy 0.13.0 (#13176)Adam J. Stewart1-2/+3
2019-10-12Add py-pandas 0.25.1 (#13174)Adam J. Stewart1-4/+6
2019-10-12Add py-packaging 19.2 (#13173)Adam J. Stewart1-2/+3
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