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2017-03-03Fix unexpected keyword error in Python 2.6 (#2954)Adam J. Stewart1-2/+1
2017-03-03Fix simul by diabling inline and replacing mpicc command. (#3323)健美猫1-0/+2
2017-03-03add package py-elephant (#3302)healther1-0/+48
* add package py-elephant * add variants for docs and pandas
2017-03-03add resource manpages to package git (#3299)healther1-14/+90
* add resource manpages to package git * Update package.py * added manpages per version * added explaining comment * fixed synatx error
2017-03-03add flex variant to cscope (#3252)healther1-2/+9
* add flex variant to cscope * fixed dependency * fixed typo
2017-03-03Add package mdtest. (#3303)健美猫1-0/+43
2017-03-03Add package sctk. (#3325)健美猫1-0/+53
2017-03-03Add packag gradle. (#3326)健美猫1-0/+83
2017-03-03add package py-spyder (#3312)healther1-0/+55
* add package py-spyder * fixed dependencies * py-flake8 -> py-pycodestyle * fixed packagename * Update package.py * Update package.py
2017-03-03add package py-qtawesome (#3308)healther1-0/+39
* add package py-qtawesome requires py-qtpy * fixed url * remove unnecessary comment
2017-03-03add package py-qtpy (#3307)healther1-0/+37
* add package py-qtpy * (re)added qt dependence * changed url
2017-03-03add package py-numpydoc (#3311)healther1-0/+38
* add package py-numpydoc * removed unnecessary dependency * added dependency
2017-03-03Add a new version for bamtools 2.4.1. (#3328)健美猫1-0/+1
2017-03-03add package notmuch and dependencies (#3329)healther3-0/+116
* add package notmuch and dependencies depends on * gmime * flake8 again
2017-03-03add package gmime (#3327)healther1-0/+39
* add package gmime * flake8 fix..
2017-03-02Fixes to allow Boost to build with Python 3 (#3293)Adam J. Stewart2-3/+47
* Fixes to allow Boost to build with Python 3 * Restrict patch to Python 3 only
2017-03-02Add new package for PaGMO/PyGMO (#3210)Adam J. Stewart2-0/+120
* Add new package for PaGMO/PyGMO * Rename py-pygmo to pagmo * Fix concretization bug * Correct Python detection, use correct flags * Install PyGMO to the pagmo prefix, not the Python prefix
2017-03-02Ior package: fix build issues (#3276)Federico Padua1-1/+2
This commits address build issues reported in issue #3268. In particular, makes cleaner the dependency on parallel-netcdf when +ncmpi variant is requested and adds CFLAGS=-D H5_USE_16_API to handle the fact that Ior uses old 1.6 style APIs when +hdf5 is requested. These changes make Ior build fine and create modules for HDF5 versions 1.8.x and 1.10.0. Even though build is successfull the modules haven't been tested in a run.
2017-03-02Convert icu4c to AutotoolsPackage (#3316)Adam J. Stewart1-12/+10
2017-03-02Make libgcc_s relocatable on Macos by adding @rpath to installname (#1671)Patrick Gartung1-2/+11
* Make libgcc_s relocatable * spack specifies full path to lib64 * don't need trailing / * setting rpath is different on macos * add -headerpad_max_install_names linker options * formatting fixes * Add Adam's recommendation
2017-03-02add package py-jedi (#3313)healther1-0/+36
2017-03-02add package py-rope (#3314)healther1-0/+36
2017-03-02add various variants to vim (#3255)healther1-3/+21
* add various variants to vim * default to --enable-fail-if-missing * vim package: -{python,ruby,lua,perl} sets build option to `no` * vim's interpreter build options are `--enable-XXXXinterp={yes,no,dynamic}` * dynamic seems to work only on windows builds * `=no` is the default => use it in spack if the variant is disabled
2017-03-02add package py-chardet (#3310)healther1-0/+36
2017-03-02add package py-boltons (#3279)healther1-0/+41
* add package py-boltons * added description * fixed non-utf8 characters
2017-03-02Update adios to 1.11.1 (#3221)Michael Kuhn2-2/+20
Add a zfp variant and a patch that resets the interpreter for gpp.py.
2017-03-02add package py-brian (#3280)healther1-0/+38
* add package py-brian * fixed typo * removed unnecessary dependency * fixed typo2
2017-03-02Feature/py doxypy (#3283)healther1-0/+34
* add package py-doxypy * fixed template and url
2017-03-02add package py-doxypypy (#3284)healther1-0/+39
2017-03-02add package py-fasteners (#3285)healther1-0/+38
* add package py-fasteners * fixed dependencies
2017-03-02add package py-flexx (#3288)healther1-0/+37
2017-03-02add version 2.0.0 for py-matplotlib (#3289)healther1-0/+1
2017-03-02add package py-lazyarray (#3290)healther1-0/+38
* add package py-lazyarray * added numpy dependency * flake8 fixes
2017-03-02add package py-lazy (#3291)healther1-0/+36
2017-03-02Add simul. (#3300)健美猫1-0/+45
2017-03-02Added a recipe for the Caffe deep learning toolkit. (#3232)Brian Van Essen1-0/+82
* Added a recipe for the Caffe deep learning toolkit. * Added code to extend python and fixed flake8 error. * Fixed Flake8 error
2017-03-02New interface for passing build information among specs (#1875)Massimiliano Culpo45-147/+389
- Added a new interface for Specs to pass build information - Calls forwarded from Spec to Package are now explicit - Added descriptor within Spec to manage forwarding - Added state in Spec to maintain query information - Modified a few packages (the one involved in spack install pexsi) to showcase changes - This uses an object wrapper to `spec` to implement the `libs` sub-calls. - wrapper is returned from `__getitem__` only if spec is concrete - allows packagers to access build information easily
2017-03-02test/packages: fixed test suite (#3236)Massimiliano Culpo1-106/+99
It seems the tests in `packages.py` were running just because we had a specific order of execution. This should fix the problem, and make the test_suite more resilient to running order.
2017-03-02fix build of 64bit PETSc and Trilinos in the same deal.II DAG (#3223)Denis Davydov3-9/+43
Declare that (i) Trilinos can be only built against 32bit Hypre (ii) SLEPc can not be built with Arpack when 64bit indices are used (iii) reflect those constraints in deal.II's depends_on While there, add extra release flags for best performance.
2017-03-02Updating SAMRAI package with new urls and new versions (#3188)Jon Rood1-24/+40
* Updating SAMRAI package file with new urls and new versions. Also using Spack's MPI compilers. * Using default optimization for Samrai and setting type to build for m4 dependency. * Adding debug variant to Samrai. * Converting Samrai to AutotoolsPackage.
2017-03-01add variant shared to yaml-cpp (#3254)healther1-0/+6
2017-03-01add package py-current (#3282)healther1-0/+36
2017-03-01Add xl and spectrum mpi support for mumps (#3231)eklee152-16/+118
* Add xl and spectrum mpi support for mumps * Incorporated Denis's comments. fPIC and if-else
2017-03-01Exclude a few packages to build with xl (#3270)eklee151-0/+8
2017-03-01add version 2.2.0 to package bear (#3278)healther1-0/+1
2017-03-01Add package: git-review (#3088)healther15-7/+451
* Add git-review * Fix flake8 errors * use PythonPackage for git-review * added dependencies for git-review * fix flake8 * moved url's to pypi.io based urls * fixed flake8... again * mostly url fixes, not tested, will do tomorrow * flake8 fix * changed URL for py-pysocks * Fixed URL for pysocks * fixed url
2017-03-01add packages vcsh (#3256)healther1-0/+44
* add packages vcsh * added git dependency * added comment regarding makefile
2017-03-01add package units (#3257)healther1-0/+36
* add package units * removed unnecessary dependency * readded python dependency
2017-03-01add package py-xmlrunner and fix unittest2 dependency (#3260)healther2-0/+38
* add package py-xmlrunner and fix unittest2 dependency * add setuptools dependency
2017-03-01add package py-symfit (#3264)healther2-1/+44
* add package py-symfit * added missing dependency * fixed ordering of versions
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