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2016-11-13Edited/fixed basic usage tutorial (#2329)becker331-69/+79
* Colify compiler output * Edited/fixed basic usage tutorial * fix console spacing.
2016-11-13fake install: mock include directory (#2294)Massimiliano Culpo1-0/+1
2016-11-13install: fixed choices for `--only` (removed the default) fixes #2303 (#2308)Massimiliano Culpo1-1/+1
2016-11-12Force the recipe for Lua to use the spack compiler. (#2299)Kelly Thompson1-2/+4
* Force the recipe for Lua to use the spack compiler. I'm not sure how the old recipe worked for anyone. The Lua Makefiles set `CC=gcc` and for my spack environment the first `gcc` found in my `PATH` is `$SPACK_ROOT/lib/spack/env/gcc`, which is a directory. This caused the build to fail. My change drops the `-std=gnu99`, but this option doesn't appear to be required for a sucessful build. * Preserve the '-std=gnu99' compile option.
2016-11-12Simplify the CMake build to make it more robust. (#2325)Elizabeth Fischer1-1/+1
* Simplify the CMake build to make it more robust. * ncurses on by default.
2016-11-12Remove automake dep in libelf. (#2328)Todd Gamblin1-1/+0
2016-11-12Basic usage step-by-step tutorialGregory Becker4-3/+1247
2016-11-12Add packaging tutorial to docs (#2315)Matthew LeGendre8-5/+651
* Add packaging tutorial to docs * packaging tutorial: formatting
2016-11-10Add VizGlow package (#2298)Adam J. Stewart1-0/+58
2016-11-10Packages: Add Jansson (#2287)Axel Huebl1-0/+37
This adds the built recipe for [Jansson](http://www.digip.org/jansson/), *a C library for encoding, decoding and manipulating JSON data.* GitHub Repo: https://github.com/akheron/jansson Downstream Usage: In [ISAAC](https://github.com/ComputationalRadiationPhysics/isaac) which is an *in situ visualization library* based on [alpaka](https://github.com/ComputationalRadiationPhysics/alpaka) and/or CUDA which is used in [PIConGPU](https://github.com/ComputationalRadiationPhysics/picongpu).
2016-11-10tree: use Spack's compiler and fix installation on macOS (#2293)Denis Davydov1-5/+22
2016-11-10Packages: Add libwebsockets (#2288)Axel Huebl1-0/+40
This adds the built recipe for [libwebsockets](https://libwebsockets.org/lws-api-doc-master/html/index.html), a *C library for lightweight websocket clients and servers*. GitHub Repo: https://github.com/warmcat/libwebsockets Downstream Usage: In [ISAAC](https://github.com/ComputationalRadiationPhysics/isaac) which is an *in situ visualization library* based on [alpaka](https://github.com/ComputationalRadiationPhysics/alpaka) and/or CUDA which is used in [PIConGPU](https://github.com/ComputationalRadiationPhysics/picongpu).
2016-11-10Run HDF 5 tests post-installation (#2297)Adam J. Stewart1-2/+2
2016-11-09Allow compiler wrapper to modify environment (#2275)scheibelp7-5/+112
* Allow compiler wrapper to modify environment This adds the ability to set environment variables in the compiler wrappers. These are specified as part of the compilers.yaml config. The user may also specify RPATHs in compilers.yaml that should be added. * Minor doc tweak
2016-11-09Update package.py with/out CUDA support (#2266)christianbaensch1-0/+12
Adding some lines to prevent from using any CUDA stuff, if NVIDIA CUDA Developement Kit was installed before.
2016-11-09zlib, tar: passed to AutotoolsPackage (#2273)Massimiliano Culpo2-17/+4
2016-11-09find, uninstall: improved user interaction in the case of empty DB (#2278)Massimiliano Culpo2-2/+6
2016-11-09added numpy version 1.11.2 and moved url to pypi.io (#2286)Gregory Lee1-3/+3
2016-11-09Add py-pudb package (#2289)Oliver Breitwieser1-0/+44
2016-11-09Add 1.5.3 for py-matplotlib and moved to pypi.io (#2271)Oliver Breitwieser1-1/+2
* Added version 1.5.3 for py-matplotlib * Updated url to pypi.io so all versions are properly downloaded.
2016-11-08Updated environment-modules package: (#2279)Sergey Kosukhin1-8/+25
Added 'lib64' directory as a possible option where tclConfig.sh file can be found.
2016-11-08fix tau installation issue (#2269)Pramod Kumbhar1-1/+8
* fix tau installation issue : setup_environment() is called before install phase when 'Makefile.*' doesn't exist (causing list index out of range error). * Added detailed comment suggested by @alalazo
2016-11-07Merge pull request #2197 from skosukhin/ext_bugfixGregory Lee1-2/+2
Updated python package reflecting the changes in 9347f86
2016-11-07Waste less space when fetching cached archives, simplify fetch messages. (#2264)Todd Gamblin2-24/+39
* Waste less space when fetching cached archives, simplify fetch messages. - Just symlink cached files into the stage instead of copying them with curl. - Don't copy linked files back into the cache when done fetching. * Fixes for review. * more updates * last update
2016-11-06Don't automatically spider remote list_urls before making stage. (#2263)Todd Gamblin1-6/+1
- This might be useful but we don't want to do it unconditionally.
2016-11-06Changed cflag matching to exact rather than subset. (#2227)becker331-2/+2
Not the desired eventual behavior, but cflag subset matching is not currently working for anonymous specs and this provides a temporary solution by restricting the feature until it is fixed.
2016-11-06Further restrict versions of GCC patched (#2259)Adam J. Stewart1-1/+1
2016-11-06Wordsmithing/minor-edits to module tutorial (#2256)George Hartzell1-21/+28
* Wordsmithing/minor-edits to module tutorial A small set of wordsmithing, spell checking and minor edits to the fancy new modules tutorial! * Fix typo (sneaky z key...) * Fix "S:" and "manual<" typos
2016-11-06Add detection for redhat enterprise server to distro.py (#2262)Todd Gamblin1-1/+2
2016-11-05Add PFFT parallel FFT package (#2255)Michael Kuron4-0/+1799
* Add PFFT parallel FFT package * pfft: fix non-double precision
2016-11-05mpich: updated package to build_systems (#2254)Massimiliano Culpo1-33/+21
* mpich: updated package to build_systems * qa : flake8 issues
2016-11-05variable referenced before assignment (#2252)Massimiliano Culpo1-2/+4
2016-11-04Bugfix in concretize_compiler (#2196)Jeffrey Salmond1-8/+7
* fix bug in search for concrete compiler * simplify implementation of concretize_compiler * fix flake8 errors
2016-11-04Add STAR-CCM+ package (#2202)Adam J. Stewart1-0/+78
* Add STAR-CCM+ package * Cleanup commented out code
2016-11-04Updated py-netcdf: added dependency on py-setuptools. (#2213)Sergey Kosukhin1-0/+1
2016-11-04New texlive release, updating the digest to match (#2218)George Hartzell1-2/+4
* November 1 seems to have brought a new texlive release, updating the digest to match. Also switching the url from their automagic mirror to an explicit site to avoid inconsistencies during their updates. It seems like only yesterday (#2073) that I updated this.... * Add comment to url warning about mirror updates Add a comment to the download info warning to use a specific site rather than the mirror, to avoid wobbles during their asynchronous updates. * Fix typo ('to no' -> 'do not')
2016-11-04Fixes #1520 (#1822)scheibelp4-44/+73
Some packages which include resources fetched from source control repositories terminated package installs because they failed to archive; specifically, this included all SCM resources which identify a specific state of the repo - for example a revision in svn or a tag/revision in git. This is because the resource stage creation logic did not choose an appropriate archive name for these kinds of resources.
2016-11-04Set Clang as the default compiler on macOS (#2225)Adam J. Stewart4-25/+19
* Set OS-specific default compilers * Fix flake8 warnings
2016-11-04Fix bug in distribution detection on unsupported platforms.Todd Gamblin1-4/+8
2016-11-04Use code from the `distro` package to improve linux distro detection. (#1629)Jeffrey Salmond2-2/+1051
* Use code from the `distro` package to improve linux distro detection. Various issues [1] [2] with the platform.linux_distribution function led to the function being deprecated in python 3.4. The pipi package distro [3] contains compatible improved code that better tracks current methods for identifying linux distributions (see, for example, [4],[5]). [1]: https://bugs.python.org/issue20454 [2]: http://bugs.python.org/issue1322 [3]: https://pypi.python.org/pypi/distro [4]: https://refspecs.linuxbase.org/LSB_3.0.0/LSB-PDA/LSB-PDA/lsbrelease.html [5]: https://www.freedesktop.org/software/systemd/man/os-release.html * fix (potential) unicode problems
2016-11-04libSplash: Add 1.6.0 Release (#2244)Axel Huebl2-9/+20
* libSplash: Add 1.6.0 Release Add the latest release of libSplash, version 1.6.0. * Fix flake8 checks (another loop inversion issue)
2016-11-04module files tutorial : first complete draft (#2228)Massimiliano Culpo3-27/+1009
* module files tutorial : first complete draft - first complete draft for module files tutorial - minor corrections to module file reference * module file tutorial : first batch of corrections - module avail spelled out fully - typos from @adamjstewart - rewording of a few sentences * module file tutorial : first batch of corrections - emphasized lines in yaml files * module file tutorial : fixes according to @citibeth and @adamjstewart reviews - used long format for command options - reworded unclear sentence on tokes - reworked table in reference manual to make it clearer * module file tutorial : implemented corrections collected on site from @schlyfts * module file tutorial : removed comment (@hartzell suggestion)
2016-11-04patch older config.guess for newer architectures (#2221)Gregory Lee12-77/+145
2016-11-04setup script for bash : fixes #2209 for sh setup (#2212)Massimiliano Culpo1-2/+4
2016-11-04updates to matio package (#2243)Jeffrey Salmond1-6/+17
* updates to matio package - update to a AutoTools package - add variants for hdf5 and zlib - add latest version * fix flake8 error
2016-11-04opencoarrays package fixes and new version (#2239)Jeffrey Salmond1-9/+7
* fix and simplify opencoarrays package using new CMakePackge methods * add new version
2016-11-04Better spack spec (#2238)Todd Gamblin6-25/+85
* Add options for hashes, tree depth, and YAML to `spack spec`. - Can now display hashes with `spack spec`, like `spack find`. - Removed the old "ids" argument to `spack spec` (which printed numerical values)b - Can output YAML spec from `spack spec` with `-y` - Can control depth of DAG traversal with --cover=[nodes|edges|paths] - Can print install status (installed, missing, not installed) with -I * Don't use YAML aliases in specs. - Force Spack's YAML dumper to ignore aliases. - aliases cause non-canonical YAML to be used in DAG hash, and result in redundant hashes. - add a test to ensure this behavior stays
2016-11-04Make spec.format properties case-insensitivePeter J. Scheibel1-0/+4
2016-11-04Support 'COMPILERVERSION' in spec format stringPeter J. Scheibel1-1/+1
2016-11-04tweaks to packages using CMakePackage (#2241)Jeffrey Salmond4-12/+5
* fix to trilinos package * fix to dealii package * fix to everytrace package * fix to everytrace-example package * changes suggested by @davydden