| Age | Commit message (Collapse) | Author | Files | Lines |
|---|
|
This adds a special package type to Spack which is used to aggregate
a set of packages that a user might commonly install together; it
does not include any source code itself and does not require a
download URL like other Spack packages. It may include an 'install'
method to generate scripts, and Spack will run post-install hooks
(including module generation).
* Add new BundlePackage type
* Update the Xsdk package to be a BundlePackage and remove the
'install' method (previously it had a noop install method)
* "spack create --template" now takes "bundle" as an option
* Rename cmd_create_repo fixture to "mock_test_repo" and relocate it
to shared pytest fixtures
* Add unit tests for BundlePackage behavior
|
|
* new package: libglvnd
* remove virtual provides from libglvnd
libglvnd does not provide them directly, but
through implementations that depend on it.
* fix flake8 errors
* libglvnd: fix style/remove unecessary variants
* remove older libglvnd version
* explicitly enable all libglvnd stubs
* libglvnd: conflict with non-linux platform
|
|
|
|
|
|
* Specify rose/boost dependencies separately
* Replace custom bootstrap phase with autoreconf phase and fix typo
when locating bash exe
* Add bison/flex dependencies
* Fix configure args typo
|
|
This allows "spack spec --yaml" to generate a spec YAML file that can
be used with "spack install -f". Before, this would fail in cases
where the spec had build dependencies.
|
|
|
|
* All fetch strategies now accept the Boolean version keyword option `no_cache` in order to allow per-version control of cache-ability.
* New git-specific version keyword option `get_full_repo` (Boolean). When true, disables the default `--depth 1` and `--single-branch` optimizations that are applied if supported by the git version and (in the former case) transport protocol.
* The try / catch blog attempting `--depth 1` and retrying on failure has been removed in favor of more accurately ascertaining when the `--depth` option should work based on git version and protocol choice. Any failure is now treated as a real problem, and the clone is only attempted once.
* Test improvements:
* `mock_git_repository.checks[type_of_test].args['git']` is now specified as the URL (with leading `file://`) in order to avoid complaints when using `--depth`.
* New type_of_test `tag-branch`.
* mock_git_repository now provides `git_exe`.
* Improved the action of the `git_version` fixture, which was previously hard-wired.
* New tests of `--single-branch` and `--depth 1` behavior.
* Add documentation of new options to the packaging guide.
|
|
* Choose a specific commit as a version (before, the only version was
the master branch)
* Add CMake patch which allows for building the version added here
(this replaces the existing patches for percept in Spack)
* Update trilinos dependency
|
|
|
|
|
|
|
|
old (adios1) integration is not supported, maintained, or recommended
for openfoam. The of-adios-write package serves no purpose any more.
|
|
|
|
|
|
|
|
|
|
|
|
Also update dependencies to build latest py-deeptools versions and
add a patch to run tests:
* Replace pypi URL with github URL to download tests
* Update dependency versions of py-pysam, py-matplotlib
* Add new py-deeptoolsintervals package as a dependency
* Add py-plotly and py-nose dependencies
* Patch setup.py to collect and run tests
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
canonicalized paths vs. Spack config variables like 'tempdir' (#12492)
|
|
|
|
(#12491)
|
|
- mkdirp now takes arguments to allow it to properly set permissions on created directories.
- Two arguments (group and mode) set permissions for the leaf directory.
- Intermediate directories can inherit permissions from either the topmost existing directory (the parent) or the leaf.
|
|
On machines where $TMP is owned by a gid with no name, this avoids the
following error when the default spack stage does not exist:
(spackbook):spack$ spack clean
==> Removing all temporary build stages
==> Error: 'getgrgid(): gid not found: 57095'
Spack needs to deal with gids directly unless users pass them in.
|
|
|
|
|
|
UnifyCR has been renamed to UnifyFS. Renaming the Spack package is
the last step in this process.
This renames the package and changes any UnifyCRs to UnifyFS within
the package.
|
|
|
|
|
|
|
|
Removes messages accidentally introduced in #12072 .
|
|
Compiler caching was using the `id()` function to refer to configuration dictionary objects. If these objects are garbage-collected, this can produce incorrect results (false positive cache hits). This change replaces `id()` with an object that keeps a reference to the config dictionary so that it is not garbage-collected.
|
|
Fixes #11163
The goal of this work is to simplify stage directory structures by eliminating use of symbolic links. This means, among other things, that` $spack/var/spack/stage` will no longer be the core staging directory. Instead, the first accessible `config:build_stage` path will be used.
Spack will no longer automatically append `spack-stage` (or the like) to configured build stage directories so the onus of distinguishing the directory from other work -- so the other work is not automatically removed with a `spack clean` operation -- falls on the user.
|
|
* py-pyfaidx: tweak dependencies; fixes #12445
* py-pyfaidx: add suggestions for #12446
|
|
* This constexpr does not compile on summit.
I tried gcc6.4 and gcc7.4
* Add link the the llvm bug report.
|
|
Skip generating reports for any packages that were found in the binary cache.
|
|
|
|
Allow "spack mirror" with no spec arguments to create a mirror for the
active environment (download all concretized specs in the environment)
|
|
|
|
* camx: add version 6.50
* camx: remove unpredictable download URL
* camx: install manual and data files
|
|
* Overhaul PyTorch package
* Flake8
* Distributed requires MPI, NCCL not specified correctly
* Binary was being specified incorrectly
* Run tests at install time
* Disable GLOO in addition to GLOO_IBVERBS
|
|
Add version 2019.08.14 and rename 'develop' to 'master' to match the
git branch name (now that master is also a special name).
|
|
Both address security issues:
https://groups.google.com/forum/#!topic/golang-nuts/fCQWxqxP8aA
|
