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* Adding bc package.
* Adding ed package which is actually a dependency of bc.
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* beast1: new package
* beast1: taking suggestion
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* Add format to separate target and os for path
spec format can now handle separations of target and os for setting
up the path.
* Added ${PLATFORM} et al to spec.format()
${PLATFORM}, ${OS}, ${TARGET}
* Update tests
Updated tests and got rid of unnecessary code.
* Also update documentation to reflect this new ability.
* Add default path scheme to config.yaml
Added default path scheme to config.yaml. Users can overwrite this
section if they want.
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* Speedup the default 'libs' property search - important for external
packages.
* As advised by @alalazo, use tuples instead of lists inside
_libs_default_handler.
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* mc: new package
* Update package.py
* Update package.py
* Update package.py
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* [hypre] Add the 'headers' property plus a small tweak in the 'libs'
property.
* [hypre] Add fallbacks for searching for '.libs' in 'prefix.lib64' and
in all of 'prefix'.
* [hypre] Fix style.
* [hypre] Use find_headers instead of find + HeaderList.
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* added a new package file for PHIST (Pipelined, Hybrid-parallel Iterative Solver Toolkit)
* packages/phist: fix some formatting errors (too long lines etc)
and set allowed values for option "outlev"
* packages/phist: fix some more flake8 errors
* add headers property to netlib-lapack and intel-mkl
* ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())
* added a new package file for PHIST (Pipelined, Hybrid-parallel Iterative Solver Toolkit)
* packages/phist: fix some formatting errors (too long lines etc)
and set allowed values for option "outlev"
* packages/phist: fix some more flake8 errors
* phist: use headers property to find lapacke include dir
* phist: fix flake8 error
* phist: be more specific about dependencies and update version
* phist: state trilinos minimum version when building with Tpetra kernels
* gmp: add oldish version 5.1.3 with checksum
* phist: get rid of the 'petsc+complex' variant, it can be installed by kernel_lib=petsc ^petsc+complex
* phist: new version
* phist: fix version checksum
* Revert "add headers property to netlib-lapack and intel-mkl"
This reverts commit d8cb62905ebfb2cba186fd2d736d54a88a49d089.
* Revert "ghost: fix finding cblas header and libs (at least for mkl and netlib-lapack, which provide headers())"
This reverts commit d406a77ed7879c124fbaf1d757d002b9f0771620.
* phist: remove unused function
* phist: reorder package file versions/variants/depends_on/rest
* phist: some minor changes requested by @adamjsteward
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* Add py-cvxopt package
* Flake8 fixes
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* Fix giflib unit tests on macOS/BSD
* Unit tests occasionally fail when run in parallel
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* Fix error raising during install with Python 3
* Fix env_path too
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* Add latest version of MPFR and patches for older versions
* Fetch and checksum patches instead of storing them
* Fix bug, version attribute was being overridden
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fixes #3129
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* Added installation date and time to the database
Information on the date and time of installation of a spec is recorded
into the database. The information is retained on reindexing.
* Expose the possibility to query for installation date
The DB can now be queried for specs that have been installed in a given
time window. This query possibility is exposed to command line via two
new options of the `find` command.
* Extended docstring for Database._add
* Use timestamps since the epoch instead of formatted date in the DB
* Allow 'pretty date' formats from command line
* Substituted kwargs with explicit arguments
* Simplified regex for pretty date strings. Added unit tests.
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fixes #7543
This is very likely an hot-fix, while a more permanent solution is
needed. See this comment for more insight:
https://github.com/spack/spack/pull/7193#discussion_r176448831
on the problem.
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* meme: added perl-xml-parser dependency, resolved issue. still need to fix ghostscript or image-magick, conversion not working.
* meme: fixed issue with libxslt/libxml2 conflict, and added imagemagick support
* meme: removing libxslt/libxml2 dependency lines
* meme: configure args
* meme: separating configure args
* meme: removing a comment, and hoping for travis to rebuild. site seems back up.
* meme: make image-magick optional
* meme: add comment referencing PR
* meme: bah flake8
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* Add latest version of eigen
* Fix bug in ptscotch detection
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This updates architecture concretization to
* Search for the nearest parent in the DAG for architecture information
rather than defaulting to the root of the DAG
* Propagate architecture settings transitively, such that if for
example the target is set at the root of the dag it will set the
same target on indirect dependencies (assuming no intermediate
dependency specifies a separate target). Previously this occurred
in general but under some conditions did not, for example if an
intermediate dependency specified some subset of architecture
properties.
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* Promote to Autotools for simplicity; broaden Intel CPU opt targeting from SSE4.2 to AVX2
* make Intel CPU opt targeting same as in ../libxc
* flake8 W291
* use canonical means to pass (ahem) the test phase, h/t @adamjstewart
* revert f25d598 (unrelated merge)
* re-merge
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* Add latest versions of bazel
* Added java as dependency to run bazel
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* singularity: new version
* singularity: hash
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* New Package: jchronoss
* jchronoss: Fix flake8 errors
* jchronoss: Fix according to recommendations
* jchronoss: Remove FIXME
* jchronoss: Fix another flake8 error
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* r-dirichletmultinomial: Create new package.
* Change description.
* Change description.
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* Create mirror for system with different compilers
Spack concretizes the spec provided by the user in
"spack mirror create" to ensure downloading the right
dependencies. Under normal circumstances concretization
requires that the chosen compiler exists on the system,
but this is not required when creating download mirrors
for other systems, so this requirement is removed in that
case.
* Add test for disabling compiler existence check
* Update compiler existence checking logic
* improve test for disabling compiler existence check
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* py-python-levenshtein: Create new package
* py-python-levenshtein: fix flake8 errors
* py-python-levenshtein: Use pypi.io per packaging guide
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* perl-cairo: Create new package
* perl-cairo: Add cairo dependency
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* package/JAGS: new version (4.3)
* fix typo
fix typo
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* Using self.prefix in Trilinos to avoid global name prefix undefined bug during module refreshing.
* Fixing flake8 errors.
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note the libmpi.so itself didn't have changes, only other
components of the package had updates.
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
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* make py-setuptools a run-time-only dep for py-basemap and patch python package to only apply setuptools flag for build deps
* py-qtconsole does not require setuptools
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* pushing partially done recipe for snphylo
* r-snphylo: try
* phylip: added version 3.697
* snphylo: updated package.py
* snphylo: flake8 error fixed
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* This allows Spack to work with MD5 hashes on machines with openssl in FIPS mode.
* We are still using MD5 for validation in many places, and a later PR will replace all uses of MD5 with SHA256.
* This is a quick fix until that happens.
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