Age | Commit message (Collapse) | Author | Files | Lines | |
---|---|---|---|---|---|
2019-02-05 | New package: PMDK (#10453) | Phil Carns | 2 | -0/+75 | |
2019-02-05 | r-wgcna: new package at 1.64-1 (#10392) | Justin Stanley | 1 | -0/+31 | |
2019-02-05 | MPark: Variant v1.4.0 (#10512) | Axel Huebl | 1 | -1/+2 | |
Add the latest release of Michael Park's C++ Variant lib. | |||||
2019-02-04 | mercury package: add 'udreg' variant (#10415) | Phil Carns | 1 | -0/+10 | |
Faster and/or more robust in some cases on Cray platforms | |||||
2019-02-04 | New package: perl-hash-merge (#10506) | Levi Baber | 1 | -0/+18 | |
2019-02-04 | New package: perl-clone-choose (#10507) | Levi Baber | 1 | -0/+16 | |
2019-02-04 | votca*: add v1.5 (#10495) | Christoph Junghans | 4 | -10/+15 | |
* votca-tools: add v1.5 * votca-csg: add v1.5 * votca-xtp: add v1.5 * votca-ctp: add v1.5 | |||||
2019-02-04 | augustus: fix bam2wig auxprog build (#10362) | Justin Stanley | 1 | -5/+35 | |
* augustus: fix bam2wig auxprog build * augustus: few more changes to make new versions work | |||||
2019-02-04 | tar: add version 1.31 (#10485) | Matthias Diener | 1 | -0/+1 | |
2019-02-04 | Catch2: v2.6.0 (#10490) | Axel Huebl | 1 | -0/+1 | |
Add the latest Catch2 release. | |||||
2019-02-01 | New package: py-alembic (#10436) | wspear | 1 | -0/+17 | |
2019-02-01 | New package: py-prometheus-client (#10440) | wspear | 1 | -0/+17 | |
2019-02-01 | plumed package: add versions 2.4.4 and 2.5.0 (#10496) | Nicholas Labello | 1 | -1/+3 | |
2019-02-01 | dyninst: add patch to work with new boost (#10454) | Mark W. Krentel | 2 | -0/+35 | |
Add tribool.patch to add explicit casts from tribool to bool in two places. Boost, starting with version 1.69, turned on explicit conversions for tribool, which breaks the build for dyninst. This is merged into the current dyninst develop and is expected to be part of the next release, so the version range uses the current release as an upper bound. | |||||
2019-02-01 | New package: py-async-generator (#10439) | wspear | 1 | -0/+18 | |
2019-01-31 | gatk package: new versions, updated helper script (#10459) | zschulte | 1 | -44/+76 | |
Closes #10168 * Add versions 4.1.0.0 and 4.0.12.0 * Replace md5 checksums with sha256 * Logic to generate a helper script for versions earlier than 4 was not running. This corrects the branch which controls whether this script is generated. * Constrain Java dependency to version 8 (GATK does not work with Java 11) * Avoid adding scripts that have dependencies not handled by Spack such as gcloud and google-chrome. These scripts are good candidates for later extensions. | |||||
2019-01-31 | py-pybigwig: fix build with python3, add numpy variant (#10444) | Ricardo Silva | 2 | -2/+23 | |
* added patch to correctly pick up non-system curl when building with Python 3 * added numpy variant * add version 0.3.12 * update checksums to sha256 | |||||
2019-01-31 | New package: openjdk (#9861) | snehring | 1 | -0/+98 | |
Closes #2622 This retrieves and installs the binary of Oracle's OpenJDK (an open-source JDK implementation). The logic is largely based on the Spack JDK package (Oracle's closed-source JDK implementation). For now this is only supports Linux. If the download could be customized based on OS (for the same version), binaries are also available for MacOS and Windows. | |||||
2019-01-30 | git-lfs: add version 2.6.1, update build system (#10405) | Matthias Diener | 1 | -13/+6 | |
Build system was changed to use a Makefile. Therefore older versions (which don't support this) are removed. The new build system also supports testing by default. | |||||
2019-01-30 | fftw: fix include error for 2.x versions (#10039) | Tom Payerle | 1 | -6/+15 | |
Fixes #7372 Added patch method which renames config.h in the fftw subdir of the source tree. fftw 2.1.5 appears to ship with a copy of this file with all defines commented out. This gets read by the #include directives instead of the version in the build directory with the correct defines. As a result, many C preprocessor macros left undefined, including F77_FUNC_ which causes the bulk of fttwf77.c to be skipped due to an #ifdef, so fftw_reverse_int_array et al not included in library. Fixes #7372 Also fixed some inconsistencies with the handling of quad and long_double in specs between the configure method and the build, check, and install methods. | |||||
2019-01-30 | HDF5: Add develop Version (#10382) | Axel Huebl | 1 | -0/+13 | |
2019-01-30 | Mercury package: update libfabric dependency on Cray (#10408) | Phil Carns | 1 | -1/+0 | |
The Mercury package previously depended on libfabric@develop on Cray platforms in order to pick up a fix for the GNI provider that was only available in git. This is no longer needed now that the libfabric package is at 1.7.0. | |||||
2019-01-30 | r-pkgmaker: add 0.27, new dependencies (#10419) | Justin Stanley | 1 | -0/+14 | |
2019-01-30 | gobject-introspection: add 1.56.1 and fix download (#10462) | Michael Kuhn | 1 | -0/+5 | |
Define url_for_version, since Spack's default substitution is not sufficient | |||||
2019-01-30 | go: fix directory structure issue for 1.11.5 (#10484) | Matthias Diener | 1 | -2/+9 | |
2019-01-30 | cmake: Fix linker errors on Darwin when using external dependencies (#10467) | Chuck Atkins | 2 | -0/+33 | |
Adds upstream patch for a missing framework. This is anticipated to be fixed by CMake 3.13.4 so is only applied up to version 3.13.3 | |||||
2019-01-30 | libsodium: Updates source URL. (#10483) | Matt Belhorn | 1 | -1/+1 | |
The source URL for versions 1.0.15 and older is updated to reflect where those archives are now hosted by the upstream libsodium developers. | |||||
2019-01-30 | ninja: Add kitware version with fortran capability (#10470) | Jon Rood | 1 | -1/+3 | |
2019-01-30 | New package: SLATE (#10434) | G-Ragghianti | 1 | -0/+63 | |
2019-01-30 | jemalloc: Add variant to prepend public api with "je_" prefix (#10356) | Jason Lee | 1 | -0/+3 | |
2019-01-30 | redundans: add 0.14a (#10006) | Justin Stanley | 1 | -10/+15 | |
Also update install to use globbing | |||||
2019-01-30 | New package: simgrid (#10076) | Samuel Thibault | 1 | -0/+76 | |
2019-01-30 | zoltan: detect metis int64 variant (#10051) | Cameron Smith | 1 | -0/+4 | |
Configure zoltan depending on metis int64 support | |||||
2019-01-30 | Package py-keras: add new versions and dependencies (#10353) | dorier | 3 | -7/+70 | |
Add new versions for py-keras. Versions of py-keras at or after 2.2.0 require keras-processing and keras-applications packages. Add these packages to Spack and add dependencies to the py-keras package. | |||||
2019-01-30 | cudnn package: add version 7.2 (#10481) | Jimmy Tang | 1 | -0/+2 | |
2019-01-30 | Update opa-psm2 package (#10344) | sknigh | 1 | -8/+14 | |
* Add version 11.2.68 * Add variant to disable AVX2 for older hardware * Change the makefile so libraries and includes are not placed under $PREFIX/usr * Updated URL and homepage | |||||
2019-01-30 | r-preprocesscore: add version 1.44.0 (#10389) | Justin Stanley | 1 | -0/+1 | |
2019-01-30 | r-impute: add version 1.56.0 (#10390) | Justin Stanley | 1 | -0/+1 | |
2019-01-30 | codes package: add version 1.1.0 (#10414) | Abhinav Bhatele | 1 | -0/+1 | |
2019-01-30 | r-runit: new package at 0.4.32 (#10416) | Justin Stanley | 1 | -0/+19 | |
2019-01-30 | r-bibtex: new package at 0.4.2 (#10417) | Justin Stanley | 1 | -0/+22 | |
2019-01-30 | r-rngtools: add 1.3.1 (#10418) | Justin Stanley | 1 | -0/+1 | |
2019-01-30 | ROSS package: update homepage and git url (#10429) | Abhinav Bhatele | 1 | -2/+2 | |
2019-01-30 | Add JDK 11.0.2_9 (#10413) | Adam J. Stewart | 1 | -2/+4 | |
Also add 11.0.1_13; remove 11.0.1, which is no longer available for download. | |||||
2019-01-30 | ncl package: require cairo with pdf support (#10465) | Michael Kuhn | 1 | -1/+1 | |
Needed after #10135 | |||||
2019-01-30 | gtkplus: add gettext dependency (#10464) | Michael Kuhn | 1 | -0/+1 | |
2019-01-30 | New package: lm-sensors (#10443) | G-Ragghianti | 1 | -0/+34 | |
2019-01-30 | go: add version 1.11.5 (#10451) | Matthias Diener | 1 | -0/+1 | |
2019-01-30 | py-petsc4py: add version 3.10.1 (#10457) | Satish Balay | 1 | -1/+3 | |
Also update dependency version ranges | |||||
2019-01-30 | py-espresso package: add version 4.0.1 (#10469) | Christoph Junghans | 1 | -0/+1 | |