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2021-02-20openmpi: add variant for using internal hwloc (#19109)Howard Pritchard1-4/+6
It turns out there are certain cases where having Open MPI use an external hwloc messes up other applications that also rely on hwloc, but a different version. Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2021-02-20VTK-m: fixed inconsistencies in directives (#21820)Axel Huebl1-8/+2
* VTK-m: No `pic` variant A leftover conflict between `shared` and `pic` variants, the latter is not part of the package anymore, leads to a solver error with clingo. This removes the outdated conflict section. * VTK-m: Kokkos AMD GPU variant changed
2021-02-19update R to v4.0.4 (#21815)Patrick Schratz1-0/+1
2021-02-19py-unshare: new package (#21817)Andrew W Elble1-0/+17
2021-02-19libqrencode: new package at v4.1.1 (#21801)Olivier Cessenat1-0/+44
2021-02-19njet: add v2.0.0 (#21809)iarspider2-0/+20
2021-02-19Add new variants to tauola (hepmc3, lhapdf) (#21802)iarspider1-4/+26
2021-02-19proj: adding recent DATA and recent release up to 7.2.1 (#21804)Olivier Cessenat1-2/+18
2021-02-19Add checksum for version 0.29.20 (#21806)iarspider1-0/+1
2021-02-19cdo: switch to fftw-api (#21803)Sergey Kosukhin1-1/+1
2021-02-19Add photos 3.64; add hepmc2/hepmc3 variants (#21795)iarspider1-3/+9
2021-02-19documentation: correct precedence of included configs in environment ↵Tom Payerle1-2/+2
spack.yaml (#18663) fixes #17993
2021-02-19py-parso: add v0.8.1 (#21798)iarspider1-1/+5
2021-02-19Adding CUDA SDK 11.2.1 (#21800)Filippo Spiga1-5/+9
2021-02-19environment-modules: add v4.7.0 (#21799)Xavier Delaruelle1-1/+2
2021-02-19Update scotch package for int32 (#21728)BerengerBerthoul1-2/+4
2021-02-19CGNS: set parallel build to False to fix cp error (#21766)Bryan Herman1-0/+2
2021-02-19MCUtils: migration to gitlab (#21771)iarspider1-16/+17
2021-02-19nvhpc: add v21.2 (#21796)Filippo Spiga1-0/+4
2021-02-19ruby: remove unwanted dependencies (#21797)holrock1-4/+5
ruby/tk is removed from stdlib at ruby2.4.0
2021-02-19gperftools: add v2.8.1 (#21794)iarspider1-0/+1
2021-02-19bugfix: add build deps to 'full hash' (#21735)Greg Becker4-21/+39
The "full hash" was only including the link/run deps, but it should include build deps as well.
2021-02-19davix: add v0.7.6 (#21773)iarspider1-4/+3
2021-02-19Updates to the LBANN software stack (#21733)Brian Van Essen4-5/+41
Set the minimun C++ standard for LBANN, Hydrogen, and DiHydrogen to C++17. The minumim C++ standard for Aluminum is C++14. Add new versions for Aluminum, Hydrogen, and DiHydrogen. Added support for high performance linkers in LBANN recipe (gold and lld). Added variants to LBANN for enabling embedded Python support independently from the Python front end.
2021-02-19blast2go: conflicts for platforms other than x86_64 (#21693)h-denpo1-0/+5
2021-02-19hdf-eos5: fix hdf5 dependency (#21789)Tomoyasu Nojiri1-4/+1
2021-02-19librelp: add test dependency on valgrind (#21752)darmac1-0/+1
2021-02-18py-sip: change url because some old package is missing (#21402)darmac1-9/+9
2021-02-18Pipelines: Move PR testing stacks (currently only E4S) into spack (#21714)Scott Wittenburg6-61/+273
2021-02-18Fixed conditional in match_flag for fish env (#21679)Severin Strobl1-1/+1
An attempt to fix the conditional was made in 5a771bc8ad, yet this broke the conditional completely.
2021-02-18py-fenics-instant: new package for legacy fenics 2016 and 2017 versions (#21775)emai-imcs1-0/+28
* py-fenics-instant: new package for legacy fenics 2016 and 2017 versions * Update var/spack/repos/builtin/packages/py-fenics-instant/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-02-18Fix template for Rpackage in spack create command (#21776)Tom Payerle1-1/+1
The signature for configure_args in the template for new RPackage packages was incorrect (different than what is defined and used in lib/spack/spack/build_systems/r.py) See issue #21774
2021-02-18Testing: use spack.store.use_store everywhere (#21656)Massimiliano Culpo11-179/+181
Keep spack.store.store and spack.store.db consistent in unit tests * Remove calls to monkeypatch for spack.store.store and spack.store.db: tests that used these called one or the other, which lead to inconsistencies (the tests passed regardless but were fragile as a result) * Fixtures making use of monkeypatch with mock_store now use the updated use_store function, which sets store.store and store.db consistently * subprocess_context.TestState now transfers the serializes and restores spack.store.store (without the monkeypatch changes this would have created inconsistencies)
2021-02-18xsdk: fix @develop build (#21749)Satish Balay5-20/+47
- petsc4py: update @develop build from petsc repo - omega-h: develop branch is now main branch
2021-02-18flibcpp: Activate SWIG rebuild when +swig (#21767)Seth R. Johnson1-0/+1
This option allows downstream packages to build with SWIG and the flibcpp-exported SWIG interfaces.
2021-02-18Documentation fix: build_system configure_args for #21760 (#21761)Tom Payerle1-2/+2
Corrects the signature for configure_args (and therefore configure_vars) in documentation on RPackage build system to match the code See issue #21760
2021-02-18patches to apply to gdbm and m4 when using oneapi compiler (#21740)Gregory Lee3-0/+20
2021-02-18Arbor: rely on spack's compiler wrapper to set architecture (#21758)Sebastian Schmitt1-0/+3
2021-02-18openrasmol: new package (#21530)ketsubouchi4-0/+119
2021-02-18sgpp: use spack compiler instead of default gcc (#21756)Freifrau von Bleifrei1-13/+19
Co-authored-by: Theresa Pollinger <pollinta@ipvs.uni-stuttgart.de>
2021-02-18hpx: add v1.6.0 (#21757)Mikael Simberg1-0/+1
2021-02-18eccodes: add v2.20.0 (#21703)Sergey Kosukhin1-0/+1
2021-02-18enzo: fix for aarch64 (#21715)Tomoyasu Nojiri2-0/+14
2021-02-18tcl: add v8.6.11 (#21678)Xavier Delaruelle1-1/+2
2021-02-18dlib: fix dependency on opencv (#21718)h-denpo1-1/+1
Since a variant (imgcodecs,default=False) has been added to opencv, +imgcodecs is now required in dlib's opencv dependency.
2021-02-18quantum-espresso: fix ldflags for scalapack (#21719)m-shunji1-1/+1
2021-02-18cmake: add v3.18.6, v3.19.5 (#21725)Harmen Stoppels1-0/+2
2021-02-18osu-micro-benchmarks: add v5.7 (#21729)Michael Kuhn1-0/+1
2021-02-18nsimd: add v2.2 (#21743)Erik Schnetter1-0/+1
2021-02-18ruby: add v2.7.2, v3.0.0 (#21745)holrock1-0/+2