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2021-07-26genesis: add v1.6.0. (#25055)Rémi Lacroix1-0/+13
2021-07-26Smoke test for darshan-runtime, builds a test code, runs it and check… ↵Kevin Harms1-0/+76
(#25049)
2021-07-26py-pandas: add v1.3.1 (#25076)Adam J. Stewart1-0/+1
2021-07-26py-antlr4-python3-runtime: add v4.8 (#25078)Adam J. Stewart1-0/+2
2021-07-26py-torchmetrics: add new version (#25081)Adam J. Stewart1-4/+6
2021-07-26rstudio: add new package (#24647)Manuela Kuhn1-0/+124
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-07-26py-pyprecice: simplify package (#25077)Adam J. Stewart2-54/+11
2021-07-26py-omegaconf: add missing java dependency (#25080)Adam J. Stewart1-0/+1
2021-07-26libdc1394: add new package (#25079)Silvio Traversaro1-0/+26
2021-07-26Fix LBANN and related packages CMake CUDA arch flag (#25062)romerojosh4-8/+8
2021-07-26Fix tesseract package (#24304)Glenn Johnson2-4/+87
This PR fixes the tesseract package - add missing dependencies - build documentation - build and install java component - build and install training component
2021-07-26bedops: add v2.4.40 (#25065)Alec Scott1-0/+1
2021-07-26picard: add versions up to v2.25.7 (#25063)Alec Scott1-0/+8
2021-07-26lua-sol2: added new package (#25067)Matthieu Dorier1-0/+29
2021-07-25Rclone: add v1.56.0 (#25066)Alec Scott1-0/+5
2021-07-25freetype: add v2.11.0 (#25075)Michael Kuhn1-0/+3
2021-07-24`spack style`: automatically bootstrap dependenciesvsoch6-15/+52
This uses our bootstrapping logic to automatically install dependencies for `spack style`. Users should no longer have to pre-install all of the tools (`isort`, `mypy`, `black`, `flake8`). The command will do it for them. - [x] add logic to bootstrap specs with specific version requirements in `spack style` - [x] remove style tools from CI requirements (to ensure we test bootstrapping) - [x] rework dependencies for `mypy` and `py-typed-ast` - `py-typed-ast` needs to be a link dependency - it needs to be at 1.4.1 or higher to work with python 3.9 Signed-off-by: vsoch <vsoch@users.noreply.github.com>
2021-07-24Bump codecov/action to v2.0.2 (#24983)Massimiliano Culpo4-6/+21
* build(deps): bump codecov/codecov-action from 1 to 2.0.1 Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 1 to 2.0.1. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/master/CHANGELOG.md) - [Commits](https://github.com/codecov/codecov-action/compare/v1...v2.0.1) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Update arguments to codecov action * Try to delete the symbolic link to root folder Hopefully this should get rid of the ELOOP error * Delete also for shell tests and MacOS * Bump to v2.0.2 Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-07-24Only add hwloc to tpl/dep list for certain versions of Trilinos (#25071)Paul Kuberry1-3/+5
2021-07-23Added versions of py-grpcio upto 1.39.0 (#25056)iarspider1-0/+11
Tested only `py-grpcio@1.39.0 ^grpcio@1.39.0`
2021-07-23nvhpc: add v21.7 (#25040)Filippo Spiga1-0/+4
2021-07-23Add grpc upto 1.39.0 and update dependencies (#25037)iarspider1-1/+11
2021-07-23pgplot: fix with gcc<10 (#25042)Dylan Simon1-1/+2
2021-07-23sdl2: add v2.0.14 (#25046)Tom Stitt1-0/+1
2021-07-22py-omegaconf: add new package (#25052)Caleb Robinson1-0/+27
* Adding package for omegaconf * Update var/spack/repos/builtin/packages/py-omegaconf/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Changing py-omegaconf to use github source URL instead of pypi * Style fix Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-07-22amrex: add variant plotfile_tools (#25038)Satish Balay1-0/+3
2021-07-22Adding CUDA SDK 11.4.0 (#24609)Filippo Spiga1-0/+4
* Adding CUDA SDK 11.4.0 * Fixing import order (finger crossed) * Fixing import order (thanks alalazo for the tips) * Restored URLs for 11.4.0
2021-07-22Add smoke test for darshan-util (#25016)Kevin Harms1-0/+41
2021-07-22Add test operation to tau package (#25036)wspear1-0/+33
Copy over the general purpose mm matmult testcase. On test run build, execute (with mpi as needed) and process profile output.
2021-07-22Trilinos: enable x11 when +exodus (#25033)Seth R. Johnson1-94/+59
* trilinos: rearrange dependencies * trilinos: refactor tpl enables and add libx11 for +exodus Fixes #25028
2021-07-22Archer: Add E4S testsuite stand alone test (#24729)Richarda Butler1-0/+34
2021-07-22py-torch: fix build on blue waters (#25026)Adam J. Stewart1-9/+16
2021-07-22PROJ: set PROJ_LIB env var (#25029)Adam J. Stewart1-0/+14
2021-07-22Update MVAPICH2 Maintainers and GDR Dependencies (#25027)natshineman3-5/+4
Co-authored-by: Nick Contini <contini.26@buckeyemail.osu.edu> Co-authored-by: Nat Shineman <shineman.5@buckeyemail.osu.edu>
2021-07-22py-tensorboard-plugin-wit: fix build on Ubuntu (#25025)Adam J. Stewart1-1/+8
2021-07-22boost: conflict with GCC on macOS (#24917)albestro1-0/+8
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-07-22nut: reflect conflict with nvhpc (#25023)Iman Hosseini1-1/+3
'random123' is a template library and cannot be compiled with nvhpc Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-07-21ParaView: Add cli11 dependency (#24732)Ethan Stam1-0/+4
2021-07-21fix rocprofiler includes (#25009)Harmen Stoppels2-0/+28
2021-07-21flecsi: package updates (#24986)Robert Pavel1-21/+26
Worked with flecsi developers to tighten, relax, and clarify constraints and better understand how the flecsi project uses legion. In the process, discovered that flecsi@1.4 cannot be built with legion without heavy changes/reverts to the legion and gasnet spackages. Also, most importantly, fixed branding as to how flecsi is spelled
2021-07-21py-segmentation-models-pytorch: add new package (#25022)Adam J. Stewart1-0/+22
2021-07-21Bolt: Add E4S testsuite stand alone test (#24846)Richarda Butler1-0/+38
2021-07-21libpmemobj-cpp: fixing package not building because of valgrind flag (#24967)Matthieu Dorier1-0/+4
2021-07-21pmdk: added versions up to 1.11.0 (#24972)Matthieu Dorier1-5/+11
2021-07-21py-efficientnet-pytorch: add new package (#25021)Adam J. Stewart1-0/+19
2021-07-21py-pretrainedmodels: add new package (#25020)Adam J. Stewart1-0/+21
2021-07-21helics: added "main" version (#24987)Ryan Mast1-1/+2
2021-07-21py-timm: add new package (#25019)Adam J. Stewart1-0/+20
2021-07-21metis: suppress warnings causing issues for %nvhpc builds (#25014)Tom Payerle1-0/+11
We add compilation flags when using %nvhpc to suppress warnings (which due to global -Werror flag in the build get promoted to errors) for the following: Diagnostic 111: statement is unreachable Diagnostic 177: variable "foo" was declared but never referenced Diagnostic 188: enumerated type mixed with another type Diagnostic 550: variable "foo" was set but never used
2021-07-21Kokkos: allow c++17 starting with CUDA v11.0.0 (#25018)Martin Pokorny1-1/+1
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