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2020-10-10dealii: Reorganize package and add some new settings (#19137)Jean-Paul Pelteret1-115/+166
New variants: - cxxstd - examples
2020-10-09Add package for FLCL (#19252)Geoff Womeldorff1-0/+29
* Initial cut at FLCL spackage. Works with GCC so far. * Update spackage to list release which supports spack. Add @agaspar as a maintainer. Default unit tests to disabled when building with spack. * Change url to 0.2. * Nope, 0.3.
2020-10-09camp: new package (#19235)Danny Taller1-0/+44
2020-10-09Fixed the dependency of newer OpenMPI on current hwloc. Pathch (#17917)Brian Van Essen1-2/+4
contributed by Thorsten Kurth.
2020-10-09Use https for links (#19244)谭九鼎4-10/+10
2020-10-09Add new package: bitsery (#19090)Andreas Baumbach1-0/+16
2020-10-09Patch cereal (#19091)Andreas Baumbach2-0/+15
Change-Id: I9fe2a1490c8c31a4174aca4ed2e270aa1efa1a50 Co-authored-by: Eric Müller <mueller@kip.uni-heidelberg.de>
2020-10-08add package py-lmodule version 0.1.0 (#18856)Shahzeb Siddiqui1-0/+25
* add package py-lmodule version 0.1.0 Lmodule is tested with lmod >= 7.x. Lmod 6 has different json structure in spider which is not supported by lmodule
2020-10-08py-charm4py: new package (#18666)Tom Payerle2-0/+107
* py-charm4py: new package Charm++ for python Installation notes: 1) charm4py ships with its own charm++ tarball. It really wants to use the version it ships with. It also builds charm++ in a special way to produce libcharm.so (but not charmc, etc), so it does not seem worthwhile to try to hack to build using a spack installed charmpp. 2) Originally, the installation was failing due to unresolved cuda symbols when setup.py was doing a ctypes.CDLL of libcharm.so (in order to verify version?). This appears to be due to the fact that libcharm.so had undefined cuda symbols, but did not show libcudart.so as a dependency (in e.g. ldd output). To fix this, I had to add libcudart.so explicitly when linking libcharm.so, but since setup.py untars a tarball to build libcharm, the solution was a tad convoluted: 2a) Add a patch in spack to py-charm4py which creates a patchfile "spack-charm4py-setup.py.patch" which will modify a Makefile file (after it is untarred) to add the flags in env var SPACK_CHARM4PY_EXTRALIBS to the link command for libcharm.so 2b) The spack patch file also patches setup.py to run patch using the aforementioned patchfile to patch the Makefile after it is untarred, and sets the SPACK_CHARM4PY_EXTRALIBS variable appropriately in the setup environment. * Update var/spack/repos/builtin/packages/py-charm4py/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-charm4py/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-charm4py: flake8 fixes remove useless import Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-10-08Pymol 2.4 package update (#18618)perrymil1-6/+18
* Update Package, Pymol 2.4 * Fixed flake8 stuff * more style fixes * missing ( at EOF * added py-pymol 2.3 back this * extra line removal * white space in empty line removal * added libpng and py-pyqt5 to prefix_path
2020-10-08Add new package: py-bmap-tools (#18810)darmac1-0/+25
2020-10-08Add new package: py-azote (#18960)darmac1-0/+22
2020-10-08Add new package: py-walinuxagent (#18961)darmac1-0/+21
2020-10-08 Update of py-merlin for merlin-1.7.5 (#19069)Joe Koning1-2/+5
2020-10-08Update py-fortran-language-server (#19156)Andrew Gaspar1-1/+2
* Update py-fortran-language-server * Restore v1.11.1
2020-10-08fujitsu-ssl2: Add new package (#18498)takanori-ihara1-0/+133
fujisu-ssl2: Add new package with thread-parallel, SVE and scalapack support
2020-10-08Add mlperf-deepcam (#19206)rvinaybharadwaj1-0/+43
* Add mlperf-deepcam * Change mlperf-deepcam to reflect updated name of dependency
2020-10-08Add py-wandb (#19168)rvinaybharadwaj1-0/+33
2020-10-08Add py-sentry-sdk (#19173)rvinaybharadwaj1-0/+34
2020-10-08Add py-sanic (#19174)rvinaybharadwaj1-0/+32
* Add py-sanic * Update package.py Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com>
2020-10-08openimageio: added v2.2.7.0 (#19227)t-nojiri1-0/+3
2020-10-07Add py-apache-beam (#19204)rvinaybharadwaj1-0/+46
2020-10-07Add py-avro-python3 (#19202)rvinaybharadwaj1-0/+20
* Add py-avro-python3 * Adding deprecation warning * Updating python versions * Fixing docstring indentation * Update package.py Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com>
2020-10-07Add py-httpx (#19185)rvinaybharadwaj1-0/+24
2020-10-07Add py-fastavro (#19196)rvinaybharadwaj1-0/+34
2020-10-07Add py-h2 (#19191)rvinaybharadwaj1-0/+20
2020-10-07Add py-httpcore (#19187)rvinaybharadwaj1-0/+21
2020-10-07Add py-falcon (#19197)rvinaybharadwaj1-0/+29
2020-10-07Add py-mlperf_logging (#19182)rvinaybharadwaj1-0/+17
* Add py-mlperf_logging * replacing _ by - in package name
2020-10-07Add py-uvloop (#19169)rvinaybharadwaj1-0/+18
2020-10-07Add py-crcmod (#19207)rvinaybharadwaj1-0/+25
* Add py-crcmod * Updating homepage
2020-10-07Add py-future (#19195)rvinaybharadwaj1-1/+2
2020-10-07Add py-rfc3986 (#19176)rvinaybharadwaj1-0/+23
2020-10-07Add py-snappy (#19171)rvinaybharadwaj1-0/+18
2020-10-07Add py-grpcio (#19193)rvinaybharadwaj1-0/+2
2020-10-07Add py-gitpython (#19194)rvinaybharadwaj1-4/+11
* Add py-gitpython * removing 3.1.7 checksum
2020-10-07Add py-pytorch-gradual-warmup-lr (#19178)rvinaybharadwaj1-0/+22
* Add py-pytorch-gradual-warmup-lr * Fixed license header Co-authored-by: Robert Pavel <rspavel@lanl.gov>
2020-10-07macOS 11 version check for Perl (#19210)zhiyuanzhai2-0/+44
* Fix 'unexpected product version' error for macOS 11.0 * Adjustment: add the minimum version that this macOS patch is necessary. * Adding a keyword to prevent the patch being applied to systems other than darwin (macOS) * Deleting quotation marks
2020-10-07Add py-backports-lzma (#19201)rvinaybharadwaj1-0/+28
* Add py-backports-lzma * Fixing python version compatibility
2020-10-07Add py-sniffio (#19170)rvinaybharadwaj1-0/+20
2020-10-07Add py-shortuuid (#19172)rvinaybharadwaj1-0/+20
2020-10-07Add py-rq (#19175)rvinaybharadwaj1-0/+30
2020-10-07Add py-redis (#19177)rvinaybharadwaj1-1/+3
2020-10-07Add py-pyspark (#19179)rvinaybharadwaj1-0/+1
2020-10-07Add py-pure-eval (#19180)rvinaybharadwaj1-0/+20
2020-10-07Add py-hyperframe (#19184)rvinaybharadwaj1-0/+18
2020-10-07Add py-httptools (#19186)rvinaybharadwaj1-0/+18
2020-10-07Add py-h11 (#19192)rvinaybharadwaj1-0/+19
2020-10-07Add py-bottle (#19200)rvinaybharadwaj1-0/+28
* Add py-bottle * fixing python versions
2020-10-07Add py-hpack (#19189)rvinaybharadwaj1-0/+18
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