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2022-01-23m4: move patches hosted at savannah into the repo (#28515)Todd Gamblin3-4/+60
These URLs were giving 404's to me and to some of our users -- they do not seem to be reliable, so moving them into the tree.
2022-01-23libzmq: add variants "docs", "libbsd" (#28503)iarspider1-4/+14
2022-01-23compose: add new package (#28371)Erik Schnetter1-0/+41
2022-01-23openmpi: declare more build dependencies for `@master` (#28309)Erik Schnetter1-4/+4
2022-01-23Fix spack -C command_line_scope with other flags (#28418)Jordan Galby1-3/+3
The option `spack -C` was broken if another flag that touched config was also set (`spack -C ... -d`, `-c config:...` etc...).
2022-01-23petaca: add shared library variant (#28543)Peter Brady1-1/+4
2022-01-23palisade: add a named version for the "fppe-logreg" branch (#28544)John Wohlbier1-0/+2
Co-authored-by: John Wohlbier <jgwohlbier@sei.cmu.edu>
2022-01-23acts: add v15.0.1 (#28539)Wouter Deconinck1-0/+1
This is a bugfix version only, for an issue observed in production environments.
2022-01-23libfyaml: add v0.7.12 (#28555)Erik Schnetter1-0/+1
2022-01-22Python: ensurepip install instead of upgrade (#28553)Wouter Deconinck1-1/+1
2022-01-21openPMD-api: add version 0.14.4 (#28546)Axel Huebl1-0/+1
2022-01-21introduce `llnl.util.compat` to remove sys.version_info checks (#21720)Danny McClanahan32-246/+248
- also split typing.py into typing_extensions and add py2 shims
2022-01-21Bump py-brian2 to 2.5.0.2 (#28533)Sebastian Schmitt1-0/+1
2022-01-21bump up the version for 3.10.5 release (#28536)Sreenivasa Murthy Kolam1-0/+1
2022-01-21vecgeom/veccore: fix version interdependency (#28164)Seth R. Johnson2-0/+5
* vecgeom: require exact version of veccore Fixes configure error from downstream package: ``` CMake Error at /rnsdhpc/code/spack/opt/spack/apple-clang/cmake/7zgbrwt/share/cmake-3.22/Modules/CMakeFindDependencyMacro.cmake:47 (find_package): Could not find a configuration file for package "VecCore" that is compatible with requested version "0.8.0". The following configuration files were considered but not accepted: /rnsdhpc/code/spack/var/spack/environments/celeritas/.spack-env/view/lib/cmake/VecCore/VecCoreConfig.cmake, version: 0.6.0 ``` * veccore: add new versions
2022-01-21CUDA: add v11.6.0 (#28439)Bram Veenboer2-4/+7
2022-01-21[geant4-data] depends_on g4ensdfstate also @11 (#28388)Wouter Deconinck1-0/+1
I guess that one got dropped by mistake in the geant4 upgrade...
2022-01-21add six.raise_from() to preserve exception traceback (#28532)Danny McClanahan10-22/+213
* add six.raise_from() to preserve exception traceback * add tests for code coverage
2022-01-20trilinos: conflict with cuda >= 11.6.0 (#28530)Scott Wittenburg1-0/+6
2022-01-20Add flags to cabana to enable hypre and heffte when they are part of … ↵Patrick Bridges2-1/+16
(#28517) * Add flags to cabana to enable hypre and heffte when they are part of spec. Also add googletest to build dependencies * Fixed mixed spaced and tabs * Update package.py * Update package.py * Update package.py * Modified to request specifically heFFTe version 2.0.0 due to limitations in heFFTe cmakefiles. * Update var/spack/repos/builtin/packages/cabana/package.py Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com> * Integrated more heffte and hypre versions into cabana requests Co-authored-by: Christoph Junghans <christoph.junghans@gmail.com>
2022-01-20SIRIUS: add Eigen dependency (#28525)Anton Kozhevnikov1-0/+2
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2022-01-20hdf5: Add missing "close" statement (#28317)Erik Schnetter2-0/+22
* hdf5: Add missing "close" statement * hdf5: Apply fortran-kinds patch only to @1.10.7
2022-01-20Julia: build without vendored dependencies (#27280)Harmen Stoppels6-271/+317
* Julia unvendored * restrict LBT
2022-01-20libblastrampoline: Add v4.0.0 and co-maintainer (#28521)Mosè Giordano1-1/+2
2022-01-19Remove unnecessary CMAKE_C_COMPILER from nalu-wind. (#28513)Jon Rood1-1/+0
2022-01-19New package: SpECTRE numerical relativity code (#28399)Nils Leif Fischer3-0/+369
* New package: SpECTRE numerical relativity code
2022-01-19ParaView/VTK: Constrain version for ADIOS2 patch. (#28505)kwryankrattiger2-3/+5
* ParaView/VTK: Constrain version for ADIOS2 patch. Older available versions of ParaView/VTK predate ADIODS2 support. ParaView lower bound is 5.8 and VTK lower bound is 8.2.0 * ParaView: Gate the ADIOS2 by verison
2022-01-19py-shiboken: fix build with new Python (#28464)Adam J. Stewart2-1/+24
2022-01-19Adding Kosh python package v2.0 (#28426)Charles Doutriaux3-1/+29
2022-01-19SIPPackage: fix build system (#28447)Adam J. Stewart2-7/+4
2022-01-19py-astropy: remove install_options (#28448)Adam J. Stewart1-3/+0
2022-01-19py-pygpu: remove install_options (#28449)Adam J. Stewart1-12/+5
* py-pygpu: remove install_options * Fix dependencies
2022-01-19py-pymol: don't install with pip (#28450)Adam J. Stewart1-5/+11
2022-01-19py-pyodbc: remove install_options (#28454)Adam J. Stewart1-5/+2
2022-01-19py-numpy: remove install_options (#28459)Adam J. Stewart1-14/+0
2022-01-19py-scipy: remove -j flag (#28460)Adam J. Stewart1-8/+0
2022-01-19py-python-meep: remove install_options (#28461)Adam J. Stewart1-30/+0
* py-python-meep: remove install_options * Remove unused import
2022-01-19py-scs: fix CUDA build (#28463)Adam J. Stewart1-2/+1
2022-01-19Remove '==> OpenFOAM bashrc env: ' from module (#28444)Stephen Sachs1-1/+1
It seems that spack reads the output of `setup_run_environment` to build the actual spack modules and lmod modules. So, any output here will used verbatim on the shell. This patch fixes https://github.com/spack/spack/issues/26733
2022-01-19caliper: fix stand alone test (#28390)Richarda Butler1-4/+11
2022-01-19py-pyside2: fix various build issues (#28455)Adam J. Stewart1-1/+10
2022-01-19py-smac: new package (#28490)Jen Herting1-0/+32
2022-01-19spack compiler info exit 1 when no compilers are found (#28493)Logan Harbour1-1/+1
fixes #28492
2022-01-19build(deps): bump docker/build-push-action from 2.7.0 to 2.8.0 (#28495)dependabot[bot]1-1/+1
Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 2.7.0 to 2.8.0. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](https://github.com/docker/build-push-action/compare/a66e35b9cbcf4ad0ea91ffcaf7bbad63ad9e0229...1814d3dfb36d6f84174e61f4a4b05bd84089a4b9) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2022-01-19exago: add v1.3.0 (#28498)Cameron Rutherford1-5/+11
2022-01-19acts: update requirements on autodiff (#28501)Hadrien G1-1/+2
2022-01-19mgis, tfel: add explicit dependency to py-numpy (#28502)Thomas Helfer2-1/+6
2022-01-19spack: add tcl/lmod as dependencies(#28355)Harmen Stoppels1-0/+6
2022-01-18New package: py-meldmd (#28479)Jen Herting1-0/+28
* [py-meldmd] created template * [py-meldmd] added dependencies * [py-meldmd] - added homepage - added description - removed fixmes * [py-meldmd] updated copyright
2022-01-18valgrind package: add versions 3.18.0 and 3.18.1 (#28453)Melven Roehrig-Zoellner1-0/+2