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2020-10-18nag: added external detection capabilities (#18153)Massimiliano Culpo1-2/+61
2020-10-18[docs] Pkg list: current version, not latest release (#18213)Wouter Deconinck1-2/+2
The package list at https://spack.readthedocs.io/en/latest/package_list.html claims "it is automatically generated based on the packages in the latest Spack release" but it is actually based on the develop branch. This leads to confusion when users find that e.g. herwigpp is included in the list, but it cannot be found when they install the latest release. That latest release has a package list at https://spack.readthedocs.io/en/stable/package_list.html which does indeed not include herwigpp. Changing the language from "the latest Spack release" to "this Spack version" might make that clearer. Maybe.
2020-10-18mpich: Add `external find` support (#18330)Robert Blake1-0/+106
* Adding external support to mpich * Removing debugging print statement.
2020-10-18remove package: libglvnd (#18363)Omar Padron1-44/+0
2020-10-18Add new package: vvtest (#18701)Miranda Mundt1-0/+29
* Adding vvtest to spack * Fixing flake8 failures * Adding suggestions * Removing unnecessary import * Incorporating suggested changes
2020-10-18Add new package: soci (#18816)darmac1-0/+17
2020-10-18AMD ROCm rccl - numa.h issue fix (#19317)arjun-raj-kuppala3-1/+36
2020-10-18Dataviz sdk update dep variants (#19327)Chuck Atkins2-31/+18
* ecp-io-sdk: Add preferred variants to all dependencies * ecp-viz-sdk: Add preferred variants to all dependencies
2020-10-18Revert "ipopt: Add condition for 'aarch64' to Ipopt/config.guess (#13499)" ↵Massimiliano Culpo2-13/+0
(#19341) This reverts commit e7f574aad5e89be222fbee0dff72f685f87f165c.
2020-10-18Add new package: e2fsprogs (#18763)darmac1-0/+22
* Add new package: e2fsprogs * refine setup_run_environment()
2020-10-18vdt: Removed the -mfpu=neon option for aarch64. (#18134)t-nojiri2-0/+13
2020-10-18coevp: use libquadmath only x86_64 and ppcle. (#18130)t-nojiri1-0/+7
2020-10-18dmtcp: Fix for aarch64 (#19246)t-nojiri2-0/+322
2020-10-18Fix for buildcache -o (#19354)Jason Miller1-1/+2
* Fix for buildcache -o The method has more positional arguments than the caller expects. * Address length issue. Fix pylint/flake errors.
2020-10-18bash: add ssh flag (#18992)Adam J. Stewart1-0/+3
* bash: add flag on macOS * Add flag unconditionally
2020-10-18py-scipy: added v1.5.3 (#19353)Adam J. Stewart1-14/+15
2020-10-17Update libensemble to v0.7.1 (#19349)Stephen Hudson1-2/+4
* Update libensemble to v0.7.1 * Update var/spack/repos/builtin/packages/py-libensemble/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-10-17Removing classic flang. (#19350)Nichols A. Romero4-523/+0
2020-10-17helics: Add version 2.6.1 (#19348)Ryan Mast1-0/+1
2020-10-17Spec: fix multiple generator iteration in satisfies_dependencies (#18527) ↵Omri Mor2-2/+10
(#18559)
2020-10-16Add LLVM 11.0.0 (#19309)Nichols A. Romero1-1/+2
* Add LLVM 11.0.0 * This longdouble patch was merged in.
2020-10-16gemini dep py-geneimpacts + (#19334)manifest1-0/+21
2020-10-16Fix tar detection (missing import: re) (#19338)iarspider1-0/+2
Co-authored-by: iarspider <iarpsider@gmail.com>
2020-10-16Add external package support to xz (#19339)iarspider1-0/+10
* Add external package support to xz * Flake-8 Co-authored-by: iarspider <iarpsider@gmail.com>
2020-10-16Add external package support to bzip2 (#19343)iarspider1-2/+13
* Add external package support to bzip2 * Flake-8 * Flake-8 part 2 Co-authored-by: iarspider <iarpsider@gmail.com>
2020-10-16New compiler: nvhpc (NVIDIA HPC SDK) (#19294)Scott McMillan8-3/+307
* Add nvhpc compiler definition: "spack compiler add" will now look for instances of the NVIDIA HPC SDK compiler executables (nvc, nvc++, nvfortran) in supplied paths * Add the nvhpc package which installs the nvhpc compiler * Add testing for nvhpc detection and C++-standard/pic flags Co-authored-by: Scott McMillan <smcmillan@nvidia.com>
2020-10-16ghostscript: add external package detection (#19346)iarspider1-0/+9
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-10-16Fix for MKL ScaLAPACK (#19336)Pieter Ghysels1-1/+5
2020-10-16parquet-format: added new package at v2.8.0 (#18544)darmac1-0/+19
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-10-16py-inheritance: added new package at v0.1.5 (#19337)manifest1-0/+21
2020-10-16spack external find: fix debug output (#19342)iarspider1-2/+4
Output was, e.g. `Executables in /bin and /,u,s,r,/,b,i,n are both associated with the same spec xz@5.2.2`, will be `Executables in /bin and /usr/bin are both associated with the same spec xz@5.2.2`.
2020-10-16diffutils: added support for external detection (#19344)iarspider1-0/+10
2020-10-16opium : convert to be an autotools package (#18708)t-nojiri1-4/+8
2020-10-16autotools: recursively patch config.guess and config.sub (#18347)Toyohisa Kameyama1-68/+57
Previously config.guess and config.sub were patched only in the root of the source path. This modification extend the previous behavior to patch every config.guess or config.sub file even in subfolders, if need be. Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-10-16GenomeWorks: added new package at v0.5.3 (#19263)dunatotatos2-0/+59
2020-10-16faiss: added new package at v1.6.3 (#17290)Harsh Bhatia3-0/+1416
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2020-10-15Environments: specify packages for developer builds (#15256)Greg Becker27-85/+1123
* allow environments to specify dev-build packages * spack develop and spack undevelop commands * never pull dev-build packges from bincache * reinstall dev_specs when code has changed; reinstall dependents too * preserve dev info paths and versions in concretization as special variant * move install overwrite transaction into installer * move dev-build argument handling to package.do_install now that specs are dev-aware, package.do_install can add necessary args (keep_stage=True, use_cache=False) to dev builds. This simplifies driving logic in cmd and env._install * allow 'any' as wildcard for variants * spec: allow anonymous dependencies raise an error when constraining by or normalizing an anonymous dep refactor concretize_develop to remove dev_build variant refactor tests to check for ^dev_path=any instead of +dev_build * fix variant class hierarchy
2020-10-15make opengl and spectrum-mpi set has_code = False (#19133)Omar Padron2-0/+4
* make opengl and spectrum-mpi set has_code = False
2020-10-15Update migraphx for rocm 3.8 (#19300)Sreenivasa Murthy Kolam3-4/+53
* update to migraphx for rocm_3.7.0 and rocm_3.8.0 * fix flake8 errors * address review comments * review changes * removed the msgpack,mentioned twice
2020-10-15Add new package: bdii (#18732)darmac1-0/+26
* Add new package: bdii * bdii: refine dependents
2020-10-15py-acme-tiny: added new package at v4.0.4 (#18808)darmac1-0/+19
2020-10-15GiNaC: added new package at v1.7.11, updated cln (#15730)Jean-Paul Pelteret2-1/+82
2020-10-15papi: restrict +sde to @6.0.0: (#19290)Tom Payerle1-0/+1
Software defined events (SDE) appear to have been introduced only in @6.0.0 (see e.g. http://icl.utk.edu/papi/software/view.html?id=275) See #19289
2020-10-15pexsi: add openmp flags to fortran flags if dependencies use OpenMP (#19274)Tom Payerle1-7/+8
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-10-15xbraid: added v2.3.0 and v3.0.0 (#19280)Cody Balos1-5/+33
2020-10-15CMake: added v3.18.3 and v3.18.4 (#19302)Adam J. Stewart1-0/+2
2020-10-15blasr-libcpp: improved setup_run_environment (#18038)manifest1-1/+11
Added non standard paths to LD_LIBRARY_PATH
2020-10-15LIKWID: added v5.0.2, new depends_on clauses and a patch for Lua (#19164)Thomas Gruber1-2/+4
2020-10-15Blaspp: added v2020.10.0, v2020.09.0, reworked recipe (#19311)G-Ragghianti1-71/+30
2020-10-15acts: added v1.02.0 (#19305)Hadrien G1-0/+7
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