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* package py-uwsgi
* package py-uwsgi
* Update var/spack/repos/builtin/packages/py-uwsgi/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* license bits
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* package py-jaraco-functools
* package py-jaraco-functools
* autopep8, docutils cleanup
* Update var/spack/repos/builtin/packages/py-jaraco-functools/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* missing deps
* license bits
* ...and later versions
* lru cache dep change from adamjstewart
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* ginkgo: add version 1.1.0
* Ginkgo: add conflict for gcc older than version 5.3
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`mirror_archive_path` was failing to account for the case where the fetched version isn't known to Spack.
- [x] don't require the fetched version to be in `Package.versions`
- [x] add regression test for mirror paths when package does not have a version
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This fix already exists in the development branch of pyside. See
https://github.com/pyside/pyside-setup/pull/55.
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* (py)arrow: new versions
* move py-arrow source to github as not all versions are on pypi
same checksum as pypi, adding build_directory
* move back to pypi sources
* drop 0.15.0 and 0.14.1 as only .whl are available on pypi
* add new dependencies
* Update var/spack/repos/builtin/packages/py-pyarrow/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* new package: py-convertdate
* Update docstring
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Patch was not being applied in recent versions of macOS. Homebrew is still applying patch to any version after High Sierra.
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* py-jupyter-core add new version and setuptools dependency
* update checksums to use pypi
* fixup url and python dep type
* Update var/spack/repos/builtin/packages/py-jupyter-core/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* new package: py-jdatetime
* Update var/spack/repos/builtin/packages/py-jdatetime/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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netcdf has been renamed to netcdf-c.
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* gromacs: add v2019.4 and others
* gromacs: fix patch applying
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* new package: py-dateparser
* take setup.py dependencies into account
* fixup help->description
* reorder dependencies
* drop version constraints not enforced in setup.py
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* new package: py-nodeenv
* drop python version requirements, not enforced by setup.py
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* py-tatsu: new package
* drop unnecessary dependencies
* drop kanji, add variant, and restrict to future releases
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netcdf-fortran@4.5: will error if netcdf-c has been built with MPI
support:
```
configure: error:
-----------------------------------------------------------------------
The NetCDF C library is built with parallel I/O feature enabled, but
the Fortran compiler '.../lib/spack/env/gcc/gfortran' supplied in this configure command
does not support MPI-IO. Please use one that does. If parallel I/O
feature is not desired, please use a NetCDF C library with parallel
I/O feature disabled. Abort.
-----------------------------------------------------------------------
```
Copy logic from netcdf-c to add an `mpi` variant.
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netcdf has been renamed to netcdf-c and udunits2 has been renamed to
udunits.
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* new package: py-pymeeus
* drop unnecessary dependencies
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* new package: py-pre-commit
* update missing dependencies
* add python version restriction
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* new package: py-aspy-yaml
* add python version dependency
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* pybind11: test get_include path
Helper for non-CMake downstream projects to find the pybind11
header location.
* pybind11: return proper get_include()
use our prefix instead of letting pybind11 trying to self-determine
it from given conda/virtualenv/global rules.
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* new package: py-ics
* drop 0.5 and move to tar-ball
* Update var/spack/repos/builtin/packages/py-ics/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-ics/package.py
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* add charliecloud 0.12
* fix typo
Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com>
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* mpi4py 3.0.3
Adds support for Python 3.8 with new Cython files.
I tried to build 3.0.0 with Python 3.8 and this builds as well,
therefor I added no conflict.
* mpi4py: update dependency version ranges
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* PyTorch: avoid use of third party vendored deps
* Flake8 fix
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* new package: py-nose-cov
* add missing dependencies
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* update py-jupyter-notebook
* add setuptools dependency for newer version
the whole jupyter collection seems to use setuptools in case of
certain setup.py-arguments from the very beginning. However the latest
ones actually require it, otherwise the build will fail
* add newly introduced dependencies
* dependency constraints
* drop terminal variant and update python dep
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(#13539)
* added relion 3.0.8 [latest stable version in 3.0 branch] as well as 3.1_beta
* relion 3.1 beta compiles without Benchmarking build type see https://github.com/3dem/relion/issues/533
* relion 3.0.X - 3.1 now supports latest cmake@3
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This fixes a regression introduced in #10792. `spack uninstall` in an
environment would not match concrete query specs properly after the index
hash of enviroments changed.
- [x] Search by DAG hash for specs to remove instead of by build hash
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If you do this in a spack environment:
spack add hdf5+hl
hdf5+hl will be the root added to the `spack.yaml` file, and you should
really expect `hdf5+hl` to display as a root in the environment.
- [x] Add decoration to roots so that you can see the details about what
is required to build.
- [x] Add a test.
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* new package py-testpath
dependency of py-nbconvert
* py-testpath: fix flake8
* Remove the unnecessary pip dependency
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* update py-zmq
* update dependencies
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* update py-jupyter-client and new setuptools dependency
* update dependencies
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* add +vserach option
* fixes #967
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* py-colorama: new version 0.4.1
* add python dependency
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