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2021-02-09Clean up .gitignore, add Python.gitignore (#20613)Adam J. Stewart1-24/+491
* Clean up .gitignore, add Python.gitignore * Ignore `spack debug create-db-tarball` logs * lib/ and var/ need to be tracked * Add editor- and OS-specific ignores * Add PyCharm ignores * Add JetBrains editors like PyCharm
2021-02-09biobambam2: Add test method and test scripts. (#21504)takanori-ihara1-0/+20
Co-Authored-By: Tamara Dahlgren <dahlgren1@llnl.gov>
2021-02-09add charliecloud 0.22 (#21574)Jordan Ogas1-0/+1
2021-02-09root: 6.22.04 works with xrootd 5 (#21572)Dr. Christian Tacke1-1/+2
ROOT version 6.22.04 has been ported to support xrootd 5. So let's support that. See: https://github.com/root-project/root/commit/a33b156e3bf809343eda08150666154a
2021-02-09Relion 3.1.1 patch for Ubuntu18.04 (#21556)Evan Bollig2-0/+33
2021-02-09add conduit 0.7.0 release (#21558)Cyrus Harrison1-0/+1
2021-02-09Procedure to deprecate old versions of software (#20767)Adam J. Stewart31-97/+215
* Procedure to deprecate old versions of software * Add documentation * Fix bug in logic * Update tab completion * Deprecate legacy packages * Deprecate old mxnet as well * More explicit docs
2021-02-09Changed stages permissions to 750 (#21425)BenWeber421-3/+3
2021-02-09Fixed uninstall rm parent folder race condition (#21424)BenWeber421-3/+12
2021-02-09penblas: fix link error in dependent packages. (#21561)Toyohisa Kameyama1-0/+4
2021-02-09Add more cmake patch releases (#21562)Harmen Stoppels1-0/+5
2021-02-09py-pandas: add v1.2.2 (#21568)Adam J. Stewart1-0/+1
2021-02-09Fix typo (#21567)Mark Meredith1-1/+1
2021-02-09bolt: add new versions (#21550)Shintaro Iwasaki1-0/+2
2021-02-09replace libelf with elfutils in hip-rocclr (#21421)Sreenivasa Murthy Kolam1-1/+1
2021-02-08New package: py-msgpack-numpy (#21548)Jen Herting1-0/+23
* [py-msgpack-numpy] created template * [py-msgpack-numpy] added dependencies * [py-msgpack-numpy] added homepage and description. removed fixmes. fixed copyright date * [py-msgpack-numpy] url -> pypi
2021-02-08py-tensorflow-estimator: update for 2.4.0 (#21546)Andrew W Elble1-17/+14
* py-tensorflow-estimator: update for 2.4.0 * build/run deptypes, switch to common tmpfile logic
2021-02-08py-tensorboard: add new versions (#21545)Andrew W Elble2-18/+27
2021-02-08xforms: new package (#21535)ketsubouchi1-0/+26
2021-02-08New package: py-imageio-ffmpeg (#20749)Jen Herting1-0/+25
* [py-imageio-ffmpeg] created template * [py-imageio-ffmpeg] added dependencies * [py-imageio-ffmpeg] added runtime dependency * [py-imageio-ffmpeg] removed fixmes, added homepage and description * [py-imageio-ffmpeg] url -> pypi and updated checksum
2021-02-08amdtoolchain support for openfoam (#21536)AMD Toolchain Support1-4/+4
2021-02-08Smoke test for parallel-netcdf package (#21400)Sergei Shudler1-0/+32
2021-02-08petsc: update to version 3.14.4, and petsc4py to 3.14.1 (#21544)Satish Balay2-1/+6
2021-02-08Restore verbosity of patching (#21233)Adam J. Stewart1-6/+6
2021-02-08Strumpack slate variant (#21542)Pieter Ghysels1-2/+6
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-02-08ldak: build only x86_64 linux. (#21414)Toyohisa Kameyama1-9/+11
2021-02-08paraview: disable VTK_PYTHON_OPTIONAL_LINK for cce (#21357)Howard Pritchard1-0/+2
when building paraview 5.8 or newer. See https://gitlab.kitware.com/vtk/vtk/-/merge_requests/7482for background info. Signed-off-by: Howard Pritchard <hppritcha@gmail.com>
2021-02-08petsc4py: workaround LDSHARED change in ↵Satish Balay2-0/+15
3cc5b7adc7d2167646d6a049d64c710d98e1d6f0 (#21541)
2021-02-08Add ReFrame 3.4 (#21540)victorusu1-0/+2
2021-02-08py-dvc: new package (#21516)Andrew-Dunning-NNL1-0/+61
* py-dvc: new package * Update var/spack/repos/builtin/packages/py-dvc/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-dvc: add version dependency for py-networkx Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-02-08cp2k: added support for AMD toolchain (#21371)AMD Toolchain Support3-28/+55
2021-02-08libqglviewer: add dependency on glu (#21438)Tomoyasu Nojiri1-0/+1
2021-02-08pangolin: add dependency on glu (#21439)Tomoyasu Nojiri1-0/+1
2021-02-08mumps: don't put absolute path in soname (#21247)lpoirel1-2/+2
2021-02-08build(deps): bump actions/cache from v2 to v2.1.4 (#21529)dependabot[bot]1-1/+1
Bumps [actions/cache](https://github.com/actions/cache) from v2 to v2.1.4. - [Release notes](https://github.com/actions/cache/releases) - [Commits](https://github.com/actions/cache/compare/v2...26968a09c0ea4f3e233fdddbafd1166051a095f6) Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2021-02-08py-matplotlib: clarify backend variant description (#21520)Adam J. Stewart1-1/+3
2021-02-08py-fiscalyear: add v0.3.1 (#21523)Adam J. Stewart1-0/+1
2021-02-08py-numpy: add v1.20.1 (#21525)Adam J. Stewart1-0/+1
2021-02-08libproxy: add v0.4.17 (#21526)darmac1-0/+6
Added dependency on Python and zlib
2021-02-08pciutils: add a PREFIX parameter to make invocation (#21527)darmac1-0/+3
2021-02-08bird: add build dependencies (#21528)darmac1-0/+2
2021-02-07Package/r require and subpackage dep fix (#21433)Desmond Orton1-0/+29
2021-02-07fix build failure with boost-1.58.0 by using higher revision (#21376)Sreenivasa Murthy Kolam2-2/+3
2021-02-07Clarify GROMACS relaxed double option (#21510)Mark Abraham1-3/+3
* Clarify relaxed double precision option This is only intended for use on the Fujitsu PRIMEHPC platform * Fix typo * Shorten line to keep linter happy
2021-02-07Bugfix: Install font-util (#20179)Richarda Butler1-1/+9
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Greg Becker <becker33@llnl.gov>
2021-02-07mpas-model: add a necessary resource (#21478)m-shunji1-0/+11
2021-02-07Parsec: new release (#21481)Aurelien Bouteiller1-1/+1
2021-02-07adding new package FTK (the feature tracking kit) (#21493)Hanqi Guo1-0/+62
2021-02-07Fixed xsbench~mpi Spec (#21498)Robert Pavel1-1/+3
2021-02-07libecpint: add v1.0.5 (#21502)Christoph Junghans1-0/+1
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