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2015-12-26Merge pull request #277 from LLNL/bugfix/vcs-mirror-fetchTodd Gamblin2-16/+41
Fix #85 and #228: errors fetching VCS packages from a mirror.
2015-12-25Default to scope with highest precedence instead of user scope,Todd Gamblin2-2/+10
- Generalizes config scopes a bit more: nothing assumes there is a 'user' scope (this would break testing sometimes).
2015-12-25Merge branch 'develop' into mplegendre-multi_pkgsrc_rootsTodd Gamblin303-804/+4020
Conflicts: lib/spack/spack/cmd/create.py lib/spack/spack/cmd/extensions.py lib/spack/spack/cmd/fetch.py lib/spack/spack/cmd/uninstall.py lib/spack/spack/config.py lib/spack/spack/database.py lib/spack/spack/directory_layout.py lib/spack/spack/packages.py lib/spack/spack/spec.py
2015-12-25Rework Spack config: keep user & site config in memory.Todd Gamblin11-268/+285
- User and site config are now kept separately in memory. - Merging is done on demand when client code requests the configuration. - Allows user/site config to be updated independently of each other by commands. - simplifies config logic (no more tracking merged files)
2015-12-25Use `filter_file` instead of calling perlErik Schnetter1-1/+1
2015-12-24Merge pull request #211 from LLNL/bugfix/github-154Todd Gamblin1-11/+29
Fix #154 -- better log messages for do_patch()
2015-12-24Fix #154 -- better log messages for do_patch()Todd Gamblin1-11/+29
2015-12-23Enable several variants for HDF5Erik Schnetter1-1/+29
+cxx, +fortran: Enable support for the respective languages +threadsafe: Enable multi-threading
2015-12-23Fix #85 and #228: errors fetching VCS packages from a mirror.Todd Gamblin2-16/+41
- Stage and fetcher were not being set up properly when fetching using a different fetch strategy than the default one for the package. - This is fixed but fetch/stage/mirror logic is still too complicated and long-term needs a rethink. - Spack will now print a warning when fetching a checksum-less tarball from a mirror -- users should be careful to use https or local filesystem mirrors for this.
2015-12-23Add comments to package fileErik Schnetter1-17/+28
2015-12-23Build JuliaErik Schnetter1-0/+55
2015-12-23Remove leftover debug statementErik Schnetter1-1/+0
2015-12-23Merge pull request #276 from LLNL/bugfix/235-smarter-spiderTodd Gamblin4-82/+183
Fix #235: Smarter web spidering -- use parsed links instead of recons…
2015-12-23Fix #235: Smarter web spidering -- use parsed links instead of reconstructing.Todd Gamblin4-82/+183
- Move `find_versions_of_archive` from spack.package to `spack.util.web`. - `spider` funciton now just uses the link parsing it already does to return links. We evaluate actual links found in the scraped pages instead of trying to reconstruct them naively. - Add `spack url-parse` command, which you can use to show how Spack interprets the name and version in a URL.
2015-12-23R : updated packagealalazo1-24/+40
2015-12-22Fix bug in URL regex.Todd Gamblin1-1/+1
2015-12-22revert accidental print statements.Todd Gamblin1-5/+0
2015-12-22More consistent URL parsing when finding versions.Todd Gamblin2-4/+10
Versions found by wildcard URLs are different from versions found by parse_version, etc. The wildcards are constructed more haphazardly than the very specific URL patterns in url.py, so they can get things wrong. e.g., for this URL: https://software.lanl.gov/MeshTools/trac/attachment/wiki/WikiStart/mstk-2.25rc1.tgz We miss the 'rc' and only return 2.25r as the version if we ONLY use URL wildcards. Future: Maybe use the regexes from url.py to scrape web pages, and then compare them for similarity with the original URL, instead of trying to make a structured wildcard URL pattern? This might yield better results.
2015-12-22New package PCRE2Erik Schnetter1-0/+15
This is a major update of the package PCRE. It seems both PCRE and PCRE2 can be installed at the same time; their APIs are different.
2015-12-22Make OpenSSL build on DarwinErik Schnetter1-6/+18
2015-12-22Merge pull request #257 from eschnett/eschnett/hwloc-1.11.2Todd Gamblin2-1/+9
Update hwloc; don't require libpciaccess on OS X
2015-12-22Merge pull request #269 from eschnett/eschnett/rsync-3.1.2Todd Gamblin1-0/+1
Update rsync to 3.1.2
2015-12-22Update rsync to 3.1.2Erik Schnetter1-0/+1
2015-12-22Skip installing libpciaccess on DarwinErik Schnetter2-2/+8
2015-12-22Update hwloc; don't require libpciaccess on OS XErik Schnetter1-2/+4
- hwloc 1.11.2 is available. - libpciaccess is not supported on OS X; don't require it there.
2015-12-22Merge branch 'develop' into correct-ccErik Schnetter16-62/+377
2015-12-22Correct quotingErik Schnetter1-5/+4
2015-12-22Merge pull request #266 from LLNL/bugfix/python3-setuptools-conflictTodd Gamblin1-3/+8
fix conflict with setuptools and cached pyc files
2015-12-22fixed site pyc regular expressionGregory L. Lee1-1/+1
2015-12-22Merge pull request #261 from LLNL/features/prefer-versions-in-packagesTodd Gamblin2-3/+10
Add ability to prefer particular versions in packages.
2015-12-22only ignore cached site.py fileGregory L. Lee1-2/+1
2015-12-22Merge pull request #263 from nolta/hdf5-mpiTodd Gamblin1-4/+2
fix non-mpi hdf5 package build
2015-12-22Merge pull request #264 from nolta/typosTodd Gamblin2-2/+2
fix a few comment typos
2015-12-22Merge branch 'nolta-249' into developTodd Gamblin1-3/+12
2015-12-22Slightly more robust tmp directory search.Todd Gamblin1-4/+12
- remove getcwd() check (seems arbitrary -- if users set their TMPDIR to this why stop them?) - try a number of common locations and try per-user directories in them first.
2015-12-22Merge pull request #265 from epfl-scitas/packages/valgrindTodd Gamblin1-0/+55
valgrind : added package
2015-12-22fix conflict with setuptools and cached pyc filesGregory L. Lee1-2/+8
2015-12-22valgrind : added packagealalazo1-0/+55
2015-12-21fix a few comment typosMike Nolta2-2/+2
2015-12-21fix non-mpi hdf5 package buildMike Nolta1-4/+2
Fixes a couple of issues in c5b7eba45743ebd131233c035101a0e64bb0c1c7.
2015-12-21fix #249 (tmp spack-stage directories conflict)Mike Nolta1-2/+3
2015-12-21Add ability to prefer particular versions in packages.Todd Gamblin2-3/+10
- Adding `preferred=True` to a version directive will change its sort order in concretization. - This provides us a rudimentary ability to keep the Spack stack stable as new versions are added. - Having multiple stacks will come next, but this at least allows us to specify default versions of things instead of always taking the newest.
2015-12-21new python versionsGregory L. Lee1-0/+2
2015-12-21remove numpy compiler patchGregory L. Lee1-7/+0
2015-12-21Merge pull request #208 from epfl-scitas/features/resource_directiveTodd Gamblin8-41/+287
resource directive : implementation + clang / llvm use case
2015-12-21Merge branch 'develop' into correct-ccErik Schnetter69-147/+1852
2015-12-21Merge pull request #215 from sjtbham/developTodd Gamblin1-3/+18
fix build to work against depends for modules created by setup.py and…
2015-12-21Simplify Spack cc scriptErik Schnetter1-153/+130
2015-12-21scalasca + dependencies : simplified build after #255alalazo5-160/+107
2015-12-21scalasca : updated package build (depends on scorep, does not build twice).alalazo1-49/+47
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