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2024-06-19verilator: add v5.026 (#44757)Dave Keeshan1-1/+2
2024-06-19spectre: add v2024.06.18 (#44761)SXS Bot1-0/+3
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2024-06-19covfie: new package (#44771)Stephen Nicholas Swatman1-0/+37
This commit adds the covfie package which facilitates the high-performance storage of vector fields and other structured multi-dimensional data.
2024-06-19ucx: add v1.17.0 (#44767)Carlos Bederián1-2/+3
2024-06-18upcxx package: Add resilience to broken libfabric (#44618)Dan Bonachea1-1/+7
Some systems have a libfabric install that doesn't work, so don't drop dead if a call to `fi_info` fails (e.g. due to missing shared libraries)
2024-06-18Abinit fix hdf5 (#44763)downloadico1-0/+10
* abinit: fix locating HDF5 Remove the check in the configure script to locate HDF5. Replaced by using Spack to locate the package.
2024-06-18Legion: Reformatted Old To New Test Method and skipping tests (#44733)AcriusWinter1-17/+10
* Legion: reformatted old test method to match new test method * Updated docstring and how cmake file is opened
2024-06-18e4s external rocm ci: bump rocm stack to v6.1.1 (#44449)eugeneswalker2-94/+99
* e4s external rocm ci: bump rocm stack to v6.1.1 * comment out exago+rocm due to issue with raja@0.14.0 see spack issue #44593 * comment out adios2+rocm due to spack issue #44594 * comment out petsc+rocm due to spack issue #44600 * comment out sundials+rocm due to spack issue #44601 * comment out slepc+rocm due to petsc spack issue #44600 * comment out tau+rocm due to spack issue #44659 * comment out ecp-data-vis-sdk due to spack issue #44745 * packages: register rocm-core as external * re-enable tau due to issue #44659 having been resolved * use latest ci image: ecpe4s/ubuntu22.04-runner-amd64-gcc-11.4-rocm6.1.1:2024.06.17 * comment out paraview due to spack issue #44745 * comment out ecp-data-vis-sdk +vtkm due to issue https://gitlab.spack.io/spack/spack/-/jobs/11632511
2024-06-18py-rios: add 1.4.17, v2.0.1 (#44679)Neil Flood1-2/+21
* Update for 2.0.1 * cloudpickle dependency is only 'run' * Follow new formatting guidelines * black wants trailing commas * Simplified version ranges, as recommended by @tldahlgren
2024-06-18vtk-m: Changed test method names and skipping non-applicable tests from old ↵AcriusWinter1-9/+4
to new approach (#44705) * vtk-m: Changed test method names and skipping non-applicable tests from old to new approach ----- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-18seacr: new package @1.4-b2 (#42677)George Young1-0/+33
* seacr: new package @1.4-b2 * Update var/spack/repos/builtin/packages/seacr/package.py Co-authored-by: Alec Scott <hi@alecbcs.com> --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk> Co-authored-by: Alec Scott <hi@alecbcs.com>
2024-06-18Boost: switch from jfrog to boost.io for downloads (#44728)Tim Haines1-1/+1
The jfrog hosting will be shut down in Dec 2024.
2024-06-18build(deps): bump flake8 from 7.0.0 to 7.1.0 in /lib/spack/docs (#44752)dependabot[bot]1-1/+1
2024-06-18build(deps): bump urllib3 from 2.2.1 to 2.2.2 in /lib/spack/docs (#44751)dependabot[bot]1-1/+1
2024-06-18build(deps): bump flake8 from 7.0.0 to 7.1.0 in /.github/workflows/style ↵dependabot[bot]1-1/+1
(#44750)
2024-06-17ascent: add v0.9.3 (#44571)Chris White3-8/+169
* add new ascent version * add requirement for new version of umpire/raja * add patch for vtk-m dependency
2024-06-17Chapel package: major update (#42197)arezaii2-12/+827
* add cray detection taken from upcxx * add CUDA/ROCm support * add numerous pass-through options to Chapel build, like gpu_mem_strategy, comm_substrate, etc.; all variants are translated to analogous CHPL_* environment variables. As a side effect, this defines a number of environment variables that are not actually used by Chapel. * Define LD_LIBRARY_PATH, LIBRARY_PATH, and PKG_CONFIG_PATH to help programs built with Chapel properly locate needed runtime dependencies --------- Co-authored-by: bonachea <dobonachea@lbl.gov>
2024-06-17Bugfix: omega-h stand-alone tests: ensure proper ordering (#44748)Tamara Dahlgren1-22/+15
2024-06-17pass: install autocompletion for all shells (#44744)Alec Scott1-1/+1
2024-06-17PROJ: add new versions, improve tiff patches (#42767)Dan Lipsa5-38/+72
* Projsync needs curl This fixes a proj compilation error from paraview * tiff does not set TIFF_INCLUDE_DIR tested by proj * TIFF patch exists for proj 9.2 * Add comments with location of proj patch * Use TIFF patches for different cmake versions * Use modules starting cmake 3.28 and variables before that * Fix black style * Simpler patches, add newer proj * Remove duplicated flag * Deprecate PROJ 4.8 and older * Remove PRIVATE * Deprecate PROJ 7.0.0 --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-06-17[cp2k] Enforce exclusion of libxsmm main (#44739)Taillefumier Mathieu2-6/+11
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2024-06-15update minimum libvterm version for 0.10.0 (#44720)Alberto Invernizzi1-0/+1
https://github.com/neovim/neovim/commit/7a5effb0f95e295c265fe09e7414d859a6d79657
2024-06-15`spack-python`: remove superfluous `/usr/bin/env` (#44724)Todd Gamblin1-1/+1
Not sure why I had this here, as `/bin/sh` will find the first spack in `PATH` just like `env`. - [x] remove `/usr/bin/env` and avoid an extra process launch. Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-06-14omega-h: reformatted from old test method to new test method (#44712)AcriusWinter1-14/+18
* omega-h: reformatted from old test method to new test method * omega-h: added proper output checking -------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-14libstdcompat: removed duplicate build-time test method (#44725)AcriusWinter1-5/+0
* libstdcompat: removed stand-alone test method
2024-06-14Intel MKL express requirements as requires (#44727)kwryankrattiger1-23/+14
The ``+cluster` variant requires there be an MPI family known in the spec. When using externals it is easy to miss-configure this requirement leading to a runtime exception which is not desirable. This converts the exception to a package rule.
2024-06-14muparser: refactor to use new multi-build-system logic (#44552)James Smillie1-15/+23
2024-06-14HDF5: Fix typo in symlink paths (#44711)psakievich1-1/+1
2024-06-14hip: Adding hipother for cuda support starting from 6.0 (#44453)renjithravindrankannath1-3/+23
* Adding hipother for cuda support starting from 6.0 * Updating the version check as per current spec
2024-06-14Build developer-tools pipeline only on manylinux (#43811)Massimiliano Culpo2-91/+0
2024-06-13rclone: add v1.65.2 (#44657)Alec Scott1-0/+1
2024-06-13go: add v1.22.4 (#44656)Alec Scott1-0/+1
2024-06-13hugo: add v0.127.0 (#44626)Alec Scott1-17/+2
2024-06-13fd: add v10.1.0 (#44623)Alec Scott1-0/+1
2024-06-13openmpi: disable remark 10441 for intel classic 2021.7.0 or newer (#44614)Harshula Jayasuriya1-0/+17
* Compilation of openmpi fails when intel classic compiler 2021.7.0 or newer is used.
2024-06-13xorg pkgs: update versions and homepage cgit -> gitlab (#44420)Wouter Deconinck122-121/+141
* xorg libs: new versions * xorg pkgs: update homepage from cgit to gitlab * xorgs pkgs: fix homepage since, yeah, I did edit those 122 files by hand... * libxmu: don't need the .0 patch version here --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-13gh: add 2.50.0 (#44670)Matt Thompson1-0/+1
2024-06-13build(deps): bump codecov/codecov-action from 4.4.1 to 4.5.0 (#44710)dependabot[bot]2-6/+6
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 4.4.1 to 4.5.0. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md) - [Commits](https://github.com/codecov/codecov-action/compare/125fc84a9a348dbcf27191600683ec096ec9021c...e28ff129e5465c2c0dcc6f003fc735cb6ae0c673) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-06-13add draco-7_18_0 to package.py (#44673)Mathew Cleveland1-0/+1
Co-authored-by: Cleveland <cleveland@lanl.gov>
2024-06-13perl-dbd-mysql: add v4.052, v5.005 (#44503)Teague Sterling1-3/+26
* Fixed some issues with installation breaking due to mysql_client * Remove debugging details * Adding client_only to deps * Adding client_only to variant and deps * Undoingw client_only to variant and deps
2024-06-13openjdk: update default version to 17.x (#44647)Diego Alvarez S3-11/+11
* Set default version of OpenJDK to 17.x * Fix OpenJDK newer versions in Apple Silicon * Specify java@11 for astral and stc
2024-06-13Adding pkgconfig dependecy to startup-notification (#44709)Teague Sterling1-0/+1
Signed-off-by: Teague Sterling <teaguesterling@gmail.com>
2024-06-13hpctoolkit: conflicts with elfutils @0.191 (#44696)Jonathon Anderson1-0/+6
See https://gitlab.com/hpctoolkit/hpctoolkit/-/issues/831
2024-06-13Converted warpx from the old format to the new format for stand-alone ↵AcriusWinter1-19/+27
testing (#44677) * Converted warpx from the old format to the new format for stand-alone testing --------- Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
2024-06-13Changed sz3 stand alone tests from old to new API (#44691)AcriusWinter1-7/+13
2024-06-13py-xtb: fix problem with meson file (#44595)Howard Pritchard1-0/+7
Using meson 1.3.2 the py-xtb package fails during the install process. Error signature shown in https://github.com/grimme-lab/xtb-python/pull/114 Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2024-06-13update PDC version (#44702)Jean Luca Bez1-1/+2
2024-06-13update py-tuiview to 1.2.14 (#44692)Sam Gillingham1-0/+3
* update py-tuiview to 1.2.14 * remove whitespace
2024-06-13New patch to add half include path for tests in 6.1 (#44697)renjithravindrankannath2-9/+115
* Add half include path for tests in 6.1 * removing unwanted when="@:6.1" * Correcting conditon to apply patch * Stlye check error fix and updating rpp dependency * Audit check error fix * Correcting rpp dependency and adding hsa-rocr-dev lib path to LD_LIBRARY_PATH
2024-06-13cleanup q-e-sirius recipe (#44698)Simon Pintarelli1-7/+3
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