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2024-01-29openblas: use `ARMV8SVE` when target supports SVE feature (#42107)Mosè Giordano1-1/+18
2024-01-29filesystem: cleanup (#42342)Harmen Stoppels4-253/+116
Type hints and removal of unused code
2024-01-29MDAnalysis: add v2.7.0 (#41907)Rocco Meli4-16/+33
* ensure umpire~cuda~rocm when ~cuda~rocm * MDAnalysis: add v2.7.0 * Apply suggestions from code review * license * review changes * add gsd and py-cmake versions * Update package.py * py-cmake * Update package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fix and reorder --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-01-29Improve NCL variant support and fix hdf-eos5 issues (#41259)Brian Vanderwende2-19/+80
2024-01-29add py-vl-convert-python (#42073)WuK1-0/+22
* add py-vl-convert-python * code format * Update package.py add homepage * Update var/spack/repos/builtin/packages/py-vl-convert-python/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * remove old versions, add todo * Update var/spack/repos/builtin/packages/py-vl-convert-python/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * remove blank line --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-01-29ncurses: fix 5.9 and 6.0 on modern compilers (#41982)Wouter Deconinck2-1/+166
2024-01-29py-metrics: Adding package py-metrics (#42220)Alex Leute2-0/+21
* New package: py-metrics * [py-metrics] cleaned up extra comment * Updated copyright and ran black * py-pathspec: Added version 0.5.5 --------- Co-authored-by: vehrc <vehrc@rit.edu> Co-authored-by: Jen Herting <jen@herting.cc> Co-authored-by: Alex C Leute <aclrc@rit.edu>
2024-01-29openldap: add findutils build dep (#42159)Sam Grayson1-0/+2
2024-01-29py-frozendict: patch up for Python 3.11 (#42192)Matthias Wolf1-0/+7
* py-frozendict: patch up for Python 3.11 See also Marco-Sulla/python-frozendict#68, rely on a pure Python implementation when 3.11+ is used. * mention related Github issue
2024-01-29tbl2asn: adding runtime dep libidn (#42171)snehring1-0/+2
2024-01-29of-precice: add new versions, update run environment (#40479)kjrstory1-4/+14
2024-01-29containers: switch to quay.io/almalinuxorg images (#42193)Wouter Deconinck1-4/+4
2024-01-29go: simplify dependency on git to only run (#42208)Alec Scott1-2/+2
2024-01-29new builtin package: py-biobb-common (#41993)Dani1-0/+24
* new builtin package: biobb-common * removed whitespace for the style test * replaced ' by " for the style test * changed import line for the style test * Update var/spack/repos/builtin/packages/biobb-common/package.py Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> * Update var/spack/repos/builtin/packages/biobb-common/package.py Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> * Update var/spack/repos/builtin/packages/biobb-common/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * removed test * using pypi instead of git I hope this is declared the right way. I tried to test it locally but I am having problems with a dependency (openblas) thus I can not even try if this works. * upgraded version * Added py prefix * removed biopython version restriction * directory with new py-prefixed name * Delete old non-prefixed package * Update var/spack/repos/builtin/packages/py-biobb-common/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-01-29netcdf-fortran: fix static linking in some cases (#35466)Sergey Kosukhin1-0/+12
* netcdf-fortran: enable building against static netcdf-c * netcdf-fortran: strip the output of nc-config
2024-01-29singularityce: add v3.11.4, v3.11.5 (#42251)Sean Koyama1-0/+2
Co-authored-by: Servesh Muralidharan <smuralidharan@anl.gov>
2024-01-29gnuplot: add v5.4.10, v6.0.0 (#42252)Sean Koyama1-0/+2
Co-authored-by: Servesh Muralidharan <smuralidharan@anl.gov>
2024-01-29py-jupytext: Add version 1.16 and update dependencies (#41552)Thomas Madlener1-7/+17
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-01-29Added heyoka and mppp packages (#41839)Alex Seaton2-0/+186
2024-01-29opencl-c-headers: install with CMake (#42173)Jonathon Anderson1-8/+22
2024-01-29quantum_espresso: relax constrait to allow +openmp ^elpa~openmp (#42322)Ye Luo1-1/+1
2024-01-29pika: Add 0.22.1 (#42338)Mikael Simberg1-0/+1
2024-01-29py-pandas: add v2.2.0 (#42205)Adam J. Stewart4-44/+72
2024-01-29build(deps): bump black from 23.12.1 to 24.1.0 in /lib/spack/docs (#42328)dependabot[bot]1-1/+1
Bumps [black](https://github.com/psf/black) from 23.12.1 to 24.1.0. - [Release notes](https://github.com/psf/black/releases) - [Changelog](https://github.com/psf/black/blob/main/CHANGES.md) - [Commits](https://github.com/psf/black/compare/23.12.1...24.1.0) --- updated-dependencies: - dependency-name: black dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-01-29neuron: add new versions and clean-up the recipe (#41931)Pramod Kumbhar1-66/+108
* update tarball urls, add new versions and update maintainers * remove unnecessary variant like cross-compile * use self.define and self.define_from_variant * improve regex / bug that matches with -DMPICH_SKIP_MPICXX=1 Co-authored-by: Matthias Wolf <matthias.wolf@epfl.ch> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-01-29highfive: add v2.9.0 (#42337)Luc Grosheintz1-0/+1
2024-01-29hdf5: Make +subfiling variant depend on +mpi (#42324)Tom Payerle1-1/+3
Based on CMakeLists.txt, the subfiling VFD requires a parallel HDF5 build. So make +subfiling variant depend on +mpi Should resolve #42323
2024-01-29hpctoolkit: update develop and add 2024.01.stable (#42309)Jonathon Anderson1-13/+30
2024-01-28Update tau 2.33.1 hash (#42336)wspear1-1/+1
2024-01-27Apply black 2024 style to Spack (#42317)Adam J. Stewart26-107/+85
2024-01-26[intel-oneapi-mkl] workaround linking issue for threads=openmp (#42327)Robert Cohn2-10/+7
2024-01-26pdt 3.25.2 (#42330)wspear1-1/+7
Add support for -icpx for oneapi
2024-01-26Add tau 2.33.1 (#42331)wspear1-0/+1
2024-01-26xyce: break blis circularity in depends_on (#42321)eugeneswalker1-2/+2
2024-01-26gnupg: add v2.4.4 (#42320)Massimiliano Culpo1-0/+1
2024-01-26hydrogen@1.5.3: cmake patch with ESCAPE_QUOTES (#42325)eugeneswalker2-0/+16
2024-01-26Axom: Update/merge changes from Axom's repo (#42269)Chris White2-35/+140
* update axom package from axom's repo Co-authored-by: white238 <white238@users.noreply.github.com> Co-authored-by: Greg Becker <becker33@llnl.gov>
2024-01-26Stop passing manual AWS credentials to jobs (#42096)Dan LaManna1-10/+0
2024-01-26hdf5: fix build error on Apple Clang 15 (#42264)Matthew Thompson1-0/+4
2024-01-26py-black: add v24.1.0 (#42316)Adam J. Stewart1-0/+1
2024-01-26pexsi: fix to build with fujitsu-ssl2 (#42234)m-shunji2-0/+17
Co-authored-by: inada-yoshie <inada.yoshie@fujitsu.com>
2024-01-26julia: patch for system lld and dsymutil (#42282)Harmen Stoppels1-0/+8
2024-01-26Run config audits in CI, add a new audit to detect wrongly named external ↵Massimiliano Culpo12-20/+50
specs (#42289)
2024-01-26Merge `virtuals=` from duplicate dependencies (#42281)Massimiliano Culpo2-8/+25
Previously, for abstract specs like: ``` foo ^[virtuals=a] bar ^[virtuals=b] bar ``` the second requirement was silently discarded on concretization. Now they're merged, and the abstract spec is equivalent to: ``` foo ^[virtuals=a,b] bar ```
2024-01-26e4s oneapi: use ghcr spack registry for runner image (#42267)eugeneswalker2-2/+2
2024-01-25COUNTDOWN package (#42123)Daniele Cesarini1-0/+87
* Added countdown repo * Added fixed version of COUNTDOWN * Style fixes * Changed mantainer syntax * Variants listed in alphabetical order by name * Added conflicts and some reordering * Fixed conflicts syntax * Style fixes * [@spackbot] updating style on behalf of danielecesarini --------- Co-authored-by: danielecesarini <danielecesarini@users.noreply.github.com>
2024-01-25e4s neoverse-v2: use ghcr.io/spack image registry (#42268)eugeneswalker2-2/+2
2024-01-25pflogger: Add v1.12 (#42288)Matthew Thompson1-0/+10
* pflogger: add version 1.12 * Add version * return MPI variant to false default * [@spackbot] updating style on behalf of mathomp4 --------- Co-authored-by: mathomp4 <mathomp4@users.noreply.github.com>
2024-01-25linaro-forge: added 23.1.1 version (#42283)kenche-linaro1-0/+9
2024-01-25Add eccodes@2.32.1 and eccodes@2.33.0 (#42257)Dom Heinzeller1-0/+2
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-12-27 02:46:42 +0000