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2021-01-29zfp: several package improvements (#21244)Peter Lindstrom1-34/+69
- add variants for build targets, language bindings, backends - ensure selected variants are compatible with zfp version - point to GitHub (not LLNL) tar balls - add dependencies - update link to homepage - add maintainers Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-29it seems like there was a bug in the version of APEX that we set by default ↵albestro1-0/+4
in 1.5.x (#21391)
2021-01-29dssp: added smoke tests (#21366)a-saitoh-fj1-0/+18
2021-01-29 py-cheetah: restrict valid python interpreter to 2.7.X, add v2.4.4 (#21363)Tomoyasu Nojiri1-0/+5
2021-01-29py-cheetah3: add new package at v3.2.6 (#21387)Tomoyasu Nojiri1-0/+17
2021-01-29wtdbg2: enable build for aarch64 (#21390)Tomoyasu Nojiri2-0/+31
Use sse2neon to maintain the same API calls for aarch64
2021-01-29swarm: add v3.0.0 (#21389)Tomoyasu Nojiri1-0/+3
2021-01-28py-graphviz: add v0.8.4 (#21383)Adam J. Stewart1-0/+1
2021-01-28add new package: bloaty (#21355)Cyrus Harrison1-0/+18
2021-01-28Use utf8 for latex build. (#21360)Dan Lipsa2-0/+13
Patch provided by @Billae Avoid the following error: File "/home/danlipsa/projects/spack/lib/spack/llnl/util/tty/log.py", line 768, in _writer_daemon line = _retry(in_pipe.readline)() File "/home/danlipsa/projects/spack/lib/spack/llnl/util/tty/log.py", line 830, in wrapped return function(*args, **kwargs) File "/usr/lib/python3.8/codecs.py", line 322, in decode (result, consumed) = self._buffer_decode(data, self.errors, final) UnicodeDecodeError: 'utf-8' codec can't decode byte 0x97 in position 220: invalid start byte
2021-01-28perl: add v5.32.1 (#21375)Massimiliano Culpo1-1/+9
Make it such that BigSur is seen as 10.16 rather than 11.1, since the latter causes troubles with Perl configuration
2021-01-28New Package r-fpCompare@0.2.3 (#21380)Desmond Orton1-0/+29
2021-01-28pacparser: new package at v1.3.7 (#21372)iarspider1-0/+32
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-28Make git fetching even quieter (for git v1.7.2+)(#21013)Adam J. Stewart1-0/+6
2021-01-28openmx: Fix for aarch64 (#21367)Tomoyasu Nojiri2-0/+14
2021-01-28 New package: libpulsar (#21369)Ali Ahmed1-0/+32
2021-01-28py-matplotlib: add v3.3.4 (#21378)Adam J. Stewart1-0/+1
2021-01-28New package: py-pytest-doctestplus (#21335)bryanherman1-0/+21
* added package py-pytest-doctestplus * setuptools required for run
2021-01-28New package: py-pytest-openfiles (#21339)bryanherman1-0/+24
* added package py-pytest-openfiles * remove wheel dep
2021-01-28openmc: add v0.11.0, v0.12.0 (#21349)bryanherman1-3/+28
Also added new variants to fine tune the build
2021-01-28umesimd: add new package (#21370)iarspider1-0/+25
2021-01-28autoconf: fix v2.70 and patching procedure of bin/autom4te.in (#21255)Sergey Kosukhin1-4/+15
This PR adds: 1. A patch that fixes a bug in version 2.70 (will be fixed upstream in the next release: https://savannah.gnu.org/support/?110396). 2. A fix for the way we patch shebang in bin/autom4te.in. For 2, we need to keep the original modification timestamp of the file. Otherwise, we either get an empty man page for autom4te (versions 2.69 and before) or a failure at the build time (versions 2.70 and after). The difference has to do with the update of the missing script: https://git.savannah.gnu.org/cgit/automake.git/commit/lib/missing?id=a22717dffe37f30ef2ad2c355b68c9b3b5e4b8c7 It will take time until developers of Autotools-based packages adjust their scripts to the new version, therefore, 2.69 is marked as preferred.
2021-01-28Clingo: fix missing import (#21364)Adam J. Stewart1-0/+1
2021-01-28libpeas: restrict python version range, use pkgconfig virtual dependency ↵Tomoyasu Nojiri1-2/+2
(#21313)
2021-01-28fox: add dependency to glu virtual package (#21280)Tomoyasu Nojiri1-0/+1
2021-01-27New package: py-proglog (#20750)Jen Herting1-0/+21
* [py-proglog] created template * [py-proglog] added dependencies * [py-proglog] fixed pypi url * [py-proglog] removed fixmes, added homepage and description * [py-proglog] url -> pypi * [py-proglog] added dependency on setuptools
2021-01-27Update MSTK version (#21356)Rao Garimella1-1/+2
* New interface reconstruction package * forgot to put in CMake option for Jali * cleanup whitespace * fix lines with more than 79 chars * more long line cleanup * fix typo WONTON_ENABLE_Kokkos ---> TANGRAM_ENABLE_Kokkos * New interface reconstruction package * forgot to put in CMake option for Jali * cleanup whitespace * fix lines with more than 79 chars * more long line cleanup * fix typo WONTON_ENABLE_Kokkos ---> TANGRAM_ENABLE_Kokkos * fix bugs in CMake section * more compact cmake block * update hash for 1.2.10 and add 1.2.11 * update recipe for Portage 3.0.0 * removing old versions - they won't build with the new recipe and the url specification doesn't work for them * update version to 3.3.6 Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2021-01-27New package: py-pytest-benchmark (#21324)bryanherman1-0/+21
* added pytest-benchmark recipe * Update var/spack/repos/builtin/packages/py-pytest-benchmark/package.py Added Python2 dependence. Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-27New package: py-pytest-cpp (#21328)bryanherman1-0/+22
* added package py-pytest-cpp * Update var/spack/repos/builtin/packages/py-pytest-cpp/package.py package is !=5.4.0 use @:5.3.999 Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-27New package: py-pytest-timeout (#21340)bryanherman1-0/+21
* added package py-pytest-timeout * Update var/spack/repos/builtin/packages/py-pytest-timeout/package.py Added Python2. Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-27New package: py-openmc (#21351)bryanherman1-0/+56
* added package py-openmc * Update var/spack/repos/builtin/packages/py-openmc/package.py specify branch when using branch names for versions Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-openmc/package.py use run after fixture to install openmc lib Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-openmc/package.py Simplify copying openmc library to py-openmc prefix using install Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-openmc/package.py NumPy should be 1.9+ Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * fix paren missing * Update var/spack/repos/builtin/packages/py-openmc/package.py fixed parens Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-openmc/package.py use v0.11.0 in URL Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-01-27autoconf: add version 2.70 (#21362)eugeneswalker1-0/+1
2021-01-27flux: update to latest releases (#21306)Stephen Herbein2-44/+34
2021-01-27fix cpio for intel@18 (#21322)bryanherman1-1/+1
2021-01-27Add conflict for mpich 3.4.x for clang <= 7" (#21326)Harmen Stoppels1-0/+3
2021-01-27rdma-core: add 33.1 (#21361)Michael Kuhn1-0/+1
2021-01-27openmpi find external fixup (#21354)Greg Becker1-4/+5
2021-01-27Package/spades (#21227)Desmond Orton1-1/+2
Co-authored-by: codeandkey <jtst@iastate.edu>
2021-01-27added gawk version 5.1.0 (#21342)bryanherman1-0/+1
2021-01-27libecpint: initial add (#21353)Christoph Junghans1-0/+30
* libecpint: initial add * flake8
2021-01-27ELPA: Switch to HTTPS links. (#21352)Rémi Lacroix1-4/+4
2021-01-27py-dpath: new recipe (#21331)Andrew-Dunning-NNL1-0/+19
2021-01-27added package py-pytest-flakes (#21337)bryanherman1-0/+22
2021-01-27py-mailchecker: new recipe (#21346)Andrew-Dunning-NNL1-0/+19
2021-01-27py-jsonpath-ng: new recipe (#21347)Andrew-Dunning-NNL1-0/+23
2021-01-27LBANN: add support for building with OneDNN. (#21305)Brian Van Essen1-0/+3
2021-01-27OneDNN: add versions up to v2.1-rc (#21304)Brian Van Essen1-0/+6
2021-01-27Add a context wrapper for mtime preservation (#21258)Sergey Kosukhin2-1/+44
Sometimes we need to patch a file that is a dependency for some other automatically generated file that comes in a release tarball. As a result, make tries to regenerate the dependent file using additional tools (e.g. help2man), which would not be needed otherwise. In some cases, it's preferable to avoid that (e.g. see #21255). A way to do that is to save the modification timestamps before patching and restoring them afterwards. This PR introduces a context wrapper that does that.
2021-01-27portage: added v3.0.0, deleted old versions (#21293)Rao Garimella2-36/+77
old versions won't build with the new recipe and the url specification doesn't work for them Co-authored-by: Rao Garimella <rao@abyzou.lanl.gov>
2021-01-27vecgeom: add v1.1.9 release (#21341)Ben Morgan1-0/+1
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