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2023-07-17qt-base: fix build on macos, when +network (#38519)Martin Aumüller1-5/+18
* qt-base: always link to GSS framework on macOS On macos, the code in src/network/kernel/qauthenticator.cpp unconditionally includes the header from the GSS framework, so we should link against it. This applies two patches from the dev branch. They are to be cherry-picked into the 6.5 (probably released with 6.5.2) and 6.6 branches, but they apply against 6.3.2 as well. * qt-base: disable libproxy on macOS src/network/CMakeLists.txt disables it on MACOS anyway. And as it is not found without pkg-config, building with +network would break because of the feature being explicitly enabled. * qt-base: don't depend on pkgconfig on macOS On macOS, usage of pkg-config is disabled by unsetting PKG_CONFIG_EXECUTABLE, unless the feature pkg-config is requested explicitly. * qt-base: don't depend on at-spi2-core on macOS Does not build on macOS and seems to be targeted at linux. Qt6 on homebrew does not depend on it, either. * qt-base: fix long lines * qt-base: restrict use of pkgconfig to linux yes, probably not needed on windows, either Co-authored-by: Alec Scott <alec@bcs.sh> * qt-base: disable libproxy on Windows as well according to src/network/CMakeLists.txt it's only used on Unix * qt-base: improvements based on reviewer suggestions --------- Co-authored-by: Alec Scott <alec@bcs.sh>
2023-07-17legion: Add 23.06.0, variants for UCX, max nodes, update CUDA version. (#38759)Elliott Slaughter1-8/+29
* legion: Add 23.06.0, variants for UCX, max nodes, update CUDA version. * legion: Make newer CUDA versions dependent on newer Legion. * legion: Update CUDA arch list so that we can stop tracking manually.
2023-07-17HiPACE++ 23.07 (#38862)Maxence Thévenet1-2/+12
* Update package and fix compilation issues * fix order
2023-07-17Added py-eprosima-fastdds package (#38877)Daniele Cesarini1-0/+29
* Added py-eprosima-fastdds package * Fixed python extension and dependency version * Added build type for swig * Added minimum cmake support * Added py-test dependency * Added suggestion on python extension Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Added suggestion on build type for cmake Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-17Lock, database and store don't need global configuration on construction ↵Massimiliano Culpo24-337/+431
(#33495) Lock objects can now be instantiated independently, without being tied to the global configuration. The same is true for database and store objects. The database __init__ method has been simplified to take a single lock configuration object. Some common lock configurations (e.g. NO_LOCK or NO_TIMEOUT) have been named and are provided as globals. The use_store context manager keeps the configuration consistent by pushing and popping an internal scope. It can also be tuned by passing extra data to set up e.g. upstreams or anything else that might be related to the store.
2023-07-17Update new PythonPackage template to prefer --config-settings (#38918)Adam J. Stewart3-17/+12
2023-07-17root: Add package name to all conflict messages (#38920)Aiden Grossman1-9/+13
Not having the package name in the conflict messages can make debugging conflicts exceedingly hard when trying to concretize an environment with a sufficient number of packages. This patch adds the package name to all of the conflict messages so that it is easy to tell just from the message which package is causing conflicts.
2023-07-17Environment/depfile: fix bug with Git hash versions (attempt #2) (#37560)Peter Scheibel2-12/+91
Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2023-07-17Minimal cleanup of a few tests in `test/packaging.py` (#38880)Massimiliano Culpo1-162/+125
* Minimal cleanup of a few tests in packaging.py * Use f-strings
2023-07-15py-jinja2: add conflict for py-markupsafe@2.0.2 (#38913)Manuela Kuhn1-0/+3
* py-jinja2: add conflict for py-markupsafe@2.0.2 * Update var/spack/repos/builtin/packages/py-jinja2/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-15py-shiboken: fix build by restricting dependencies (#38900)Manuela Kuhn1-2/+5
* py-shiboken: fix build by restricting dependencies * Update var/spack/repos/builtin/packages/py-shiboken/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Remove conflict * Remove py-markupsafe conflict * Update var/spack/repos/builtin/packages/py-shiboken/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-07-15py-furo: add new package (#38904)Manuela Kuhn3-0/+66
2023-07-15py-sphinx-rtd-theme: add 1.2.2 and py-sphinxcontrib-jquery: add 4.1 (#38896)Manuela Kuhn2-7/+12
2023-07-14py-cupy: Add 11.3.0, 11.4.0, 11.5.0, 11.6.0, 12.0.0, 12.1.0 (#38911)Elliott Slaughter1-4/+14
* py-cupy: Add 11.3.0, 11.4.0, 11.5.0, 11.6.0, 12.0.0, 12.1.0. * Clean up version bounds.
2023-07-14add a phist patch to avoid trying to compile SSE code if that is not … ↵Jonas Thies2-0/+350
(#38806) * add a phist patch to avoid trying to compile SSE code if that is not available. * phist: make the avoid-sse patch more robust because compiler on ARM system still tried to compile SSE code
2023-07-14spiner: update dependencies (#37367)Richard Berger1-5/+4
* spiner: update dependencies * spiner: add v1.6.1 and updated dependency
2023-07-14legion package: use conditional variants for gasnet (#38902)Massimiliano Culpo1-37/+17
2023-07-14lmdb: add 0.9.31 (#38892)Michael Kuhn1-0/+1
2023-07-14podio: add 0.16.6 tag and mark older releases as deprecated (#38891)Thomas Madlener1-5/+26
* podio: Add latest tag * podio: Deprecate older versions
2023-07-14new release and bug fix on check() (#38901)G-Ragghianti2-4/+11
2023-07-14GDAL: add v3.7.1 (#38884)Adam J. Stewart1-0/+1
2023-07-14Remove unused context manager (#38897)Harmen Stoppels1-8/+0
2023-07-14adios2: add catalyst variant (#38852)Vicente Bolea1-0/+8
2023-07-14ci: remove aws-ahug (#38777)Harmen Stoppels4-530/+0
2023-07-14build(deps): bump actions/setup-python from 4.6.1 to 4.7.0 (#38887)dependabot[bot]5-11/+11
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4.6.1 to 4.7.0. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](https://github.com/actions/setup-python/compare/bd6b4b6205c4dbad673328db7b31b7fab9e241c0...61a6322f88396a6271a6ee3565807d608ecaddd1) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-14py-protobuf: add 4.23.3 (#38614)Manuela Kuhn3-2/+8
* py-protobuf: add 4.23.3 * protobuf: add 3.23.3 * py-protobuf: disable cpp variant for @4.22:
2023-07-14py-simplejson: add 3.19.1 (#38898)Manuela Kuhn1-1/+1
2023-07-14py-lightly: add v1.4.12 (#38883)Adam J. Stewart1-0/+1
2023-07-14Use sirius namespacing for cmake (#38707)Taillefumier Mathieu1-23/+31
* Use sirius namespacing for cmake * Formating * Fix lapack variables
2023-07-14xrootd: new versions 5.6.0, 5.6.1 (#38844)Wouter Deconinck1-2/+6
2023-07-14Fix issue on cray with super call (#38895)Rocco Meli1-1/+1
2023-07-14disable superlu test (#38894)Harmen Stoppels1-15/+0
2023-07-13Bugfix/spack spec: read and use the environment concretizer:unification ↵Tamara Dahlgren2-4/+62
option (#38248) * Bugfix: spack.yaml concretizer:unify needs to be read and used * Optional: add environment test to ensure configuration scheme is used * Activate environment in unit tests A more proper solution would be to keep an environment instance configuration as an attribute, but that is a bigger refactor * Delay evaluation of Environment.unify * Slightly simplify unit tests --------- Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-07-13Update TensorFlow ecosystem (#38747)Adam J. Stewart4-87/+43
* Update TensorFlow ecosystem * Re-add +cpp * Do not use system protobuf * Let bazel auto-detect macOS SDK version * Unnecessary duplicated dep * Remove unused import
2023-07-13eccodes: fix a few issues in the recipe (#38873)Sergey Kosukhin1-10/+12
* explicitly disable the Python 2 interface * drop obsolete cmake argument HDF5_ROOT for newer versions * set PYTHON_EXECUTABLE only when needed
2023-07-13FleCSI updates (#38870)Richard Berger1-3/+9
* flecsi: update maintainers * flecsi: allow newer HPX to be used * flecsi: propagate ROCm variants when using legion * flecsi: add v2.2.1
2023-07-13Add keep_werror = "specific" to mpich (#38861)Mikael Simberg1-0/+2
2023-07-13ccache: 4.8.2 (#38874)Harmen Stoppels1-0/+1
2023-07-13ca-certificates-mozilla: add 2023-05-30 (#38875)Harmen Stoppels1-0/+5
2023-07-13foonathan-memory: add 0.7-3 (#38879)Manuela Kuhn1-0/+4
2023-07-13spack buildcache push: improve argparse (#38876)Harmen Stoppels2-10/+13
2023-07-13mirrors: distinguish between source/binary mirror; simplify schema (#34523)Harmen Stoppels13-302/+484
Allow the following formats: ```yaml mirrors: name: <url> ``` ```yaml mirrors: name: url: s3://xyz access_pair: [x, y] ``` ```yaml mirrors: name: fetch: http://xyz push: url: s3://xyz access_pair: [x, y] ``` And reserve two new properties to indicate the mirror type (e.g. mirror.spack.io is a source mirror, not a binary cache) ```yaml mirrors: spack-public: source: true binary: false url: https://mirror.spack.io ```
2023-07-13spack audit: allow skipping version checks from package.py (#28372)Massimiliano Culpo10-5/+31
A few packages have version directives evaluated within if statements, conditional on the value of `platform.platform()`. Sometimes there are no cases for e.g. platform=darwin and that causes a lot of spurious failures with version existence audits. This PR allows expressing conditions to skip version existence checks in audits and avoid these spurious reports.
2023-07-13Add type hints to spack.installer (#38872)Harmen Stoppels4-623/+670
2023-07-13Add missing space in error msg (#38863)Adam J. Stewart1-1/+1
2023-07-13build(deps): bump docker/setup-buildx-action from 2.9.0 to 2.9.1 (#38868)dependabot[bot]1-1/+1
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.9.0 to 2.9.1. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/2a1a44ac4aa01993040736bd95bb470da1a38365...4c0219f9ac95b02789c1075625400b2acbff50b1) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-13Restrict py-pip version for packages using --install-option (#38837)Manuela Kuhn5-0/+10
2023-07-13Standardize subcommand help strings (#38804)Adam J. Stewart42-348/+295
### Rationale While working on #29549, I noticed a lot of inconsistencies in our argparse help messages. This is important for fish where these help messages end up as descriptions in the tab completion menu. See https://github.com/spack/spack/pull/29549#issuecomment-1627596477 for some examples of longer or more stylized help messages. ### Implementation This PR makes the following changes: - [x] help messages start with a lowercase letter. - [x] Help messages do not end with a period - [x] the first line of a help message is short and simple longer text is separated by an empty line - [x] "help messages do not use triple quotes" """(except docstrings)""" - [x] Parentheses not needed for string concatenation inside function call - [x] Remove "..." "..." string concatenation leftover from black reformatting - [x] Remove Sphinx argument docs from help messages The first 2 choices aren't very controversial, and are designed to match the syntax of the `--help` flag automatically added by argparse. The 3rd choice is more up for debate, and is designed to match our package/module docstrings. The 4th choice is designed to avoid excessive newline characters and indentation. We may actually want to go even further and disallow docstrings altogether. ### Alternatives Choice 3 in particular has a lot of alternatives. My goal is solely to ensure that fish tab completion looks reasonable. Alternatives include: 1. Get rid of long help messages, only allow short simple messages 2. Move longer help messages to epilog 3. Separate by 2 newline characters instead of 1 4. Separate by period instead of newline. First sentence goes into tab completion description The number of commands with long help text is actually rather small, and is mostly relegated to `spack ci` and `spack buildcache`. So 1 isn't actually as ridiculous as it sounds. Let me know if there are any other standardizations or alternatives you would like to suggest.
2023-07-13vtk-m: modernize vtk-m recipe (#38726)Vicente Bolea1-108/+38
2023-07-12ci: populate caches in before script (#38762)Harmen Stoppels1-0/+2
* ci: run spack list in power ci Let's see if Spack itself is the bottleneck in CI... * rebuild curl in CI * more of the same please! * drop the profiler * undo rebuildme test in ci variant * add comment for posterity * enable profiling * trigger CI * See how it goes now that perf regressions are fixed on develop * try shorter poll intervals * Revert "try shorter poll intervals" This reverts commit d60c34ad3eceead0c13a5277cf8e783fd42b7458. * Remove spec.format call in Database._get_matching_spec_key * once more in ci please * undo irrelevant changes * run spack list in before script * test in ci * -: * Undo CI testing
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