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2024-05-18Add Pyomo 6.7.2 (#44097)Miranda Mundt1-2/+5
2024-05-18perl-xml-libxml: add new versions and conflicts (fixes #44253) (#44254)Teague Sterling1-0/+4
* Address #44253 by adding new versions and declaring conflicts for perl-xml-libxml * [@spackbot] updating style on behalf of teaguesterling * Update var/spack/repos/builtin/packages/perl-xml-libxml/package.py Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-05-18namd: add 3.0b7 (#44198)Carlos Bederián1-0/+1
2024-05-18Adding new spark versions (#44250)Teague Sterling1-0/+6
* Adding new spark versions (in preparation of HAIL package) * Adding myself as potential maintainer
2024-05-18yq: add new package (#44249)Teague Sterling1-0/+23
2024-05-18oci buildcache: handle pagination of tags (#43136)Scott Wittenburg6-10/+171
This fixes an issue where ghcr, gitlab and possibly other container registries paginate tags by default, which violates the OCI spec v1.0, but is common practice (the spec was broken itself). After this commit, you can create build cache indices of > 100 specs on ghcr. Co-authored-by: Harmen Stoppels <me@harmenstoppels.nl>
2024-05-18git: bump v2.39 to 2.45; deprecate unsafe versions (#44248)Chris Green1-15/+81
2024-05-18whizard: add gosam variant (#43595)Valentin Volkl3-2/+16
* whizard: add gosam variant * adress comments, fix compiler wrapper issue
2024-05-18ZeroSum: add new package (#44228)Kevin Huck1-0/+73
2024-05-18perl: add v5.36.3, v5.38.2; deprecate unsafe versions (#44186)Derek Ryan Strong1-36/+103
2024-05-17protobuf: update hash for patch needed when="@3.4:3.21" (#44210)dmagdavector1-2/+2
* protobuf: update hash for patch needed when="@3.4:3.21" * Update var/spack/repos/builtin/packages/protobuf/package.py Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> * Update var/spack/repos/builtin/packages/protobuf/package.py Co-authored-by: Wouter Deconinck <wdconinc@gmail.com> --------- Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
2024-05-17docs: remove warning about repositories and package extension (#44247)Todd Gamblin1-6/+0
Local package repositories are very well supported and we test them extensively, so this warning from 8 years ago can be removed from the docs.
2024-05-17netlib-scalapack: fix build with gcc@14 (#44120)Michael Kuhn1-1/+5
2024-05-17kakoune: add v2024.05.09 (#44124)James Taliaferro1-3/+7
2024-05-17GDAL: add v3.9.0 (#44128)Adam J. Stewart1-41/+65
2024-05-17Add latest Python versions (#44130)Derek Ryan Strong1-2/+6
2024-05-17spectre: add v2024.05.11 (#44139)SXS Bot1-0/+3
Co-authored-by: sxs-bot <sxs-bot@users.noreply.github.com>
2024-05-17py-cython: add 3.0.10 (#44140)Michael Kuhn1-0/+1
2024-05-17Add `mpas-model` and `mpich` to pcluster neoverse stack (#44151)Stephen Sachs1-2/+2
Should build now since https://github.com/spack/spack/pull/43547 has been merged.
2024-05-17JAX: add v0.4.28 (#44112)Adam J. Stewart2-1/+6
2024-05-17pythia8: patch latest 8.311 for upstream bug (#43803)Wouter Deconinck1-0/+7
* pythia8: prefer 8.310 * [@spackbot] updating style on behalf of wdconinc * pythia8: filter_file to remove sed n * Revert "[@spackbot] updating style on behalf of wdconinc" This reverts commit e2a3decaffbd3f464d1bd992025e1812df49f088. * Revert "pythia8: prefer 8.310" This reverts commit 568cb056b87129085e245d9dbef1732ee1c6c0aa. * [@spackbot] updating style on behalf of wdconinc * pythia8: comment for fix * pythia8: fix style * pythia8: filter_file with raw string because of escaped pipe --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-05-17nalu-wind: fix trilinos rocm dependency (#44233)Jon Rood1-1/+1
2024-05-17tau: fix lib/include paths with oneapi (#44170)wspear1-2/+2
2024-05-17build(deps): bump codecov/codecov-action from 4.3.1 to 4.4.0 (#44195)dependabot[bot]3-7/+7
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 4.3.1 to 4.4.0. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md) - [Commits](https://github.com/codecov/codecov-action/compare/5ecb98a3c6b747ed38dc09f787459979aebb39be...6d798873df2b1b8e5846dba6fb86631229fbcb17) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-17hpcviewer: Update URLs to use GitLab release assets (#44129)Jonathon Anderson3-79/+30
2024-05-17blis: add v1.0 (#44199)Carlos Bederián1-0/+1
2024-05-17spglib: add v2.4.0 (#44202)Rocco Meli1-0/+1
2024-05-17docs: show phase signature for builders (#44067)Chris Marsh1-0/+9
2024-05-17New versions nvpl-blas and nvpl-lapack (#44244)Raffaele Solcà2-1/+11
2024-05-17starpu: add v1.4.6 (#44203)Nathalie Furmento1-0/+1
2024-05-17fenicsx: remove deprecated versions (#44223)Garth N. Wells6-147/+16
2024-05-17cli11: new version and enable library (#44204)Seth R. Johnson1-2/+8
2024-05-17Fix broken link in docs (#44217)Andrew-Dunning-NNL1-1/+1
2024-05-17MOLGW: add v3.3 (#44241)Fabien Bruneval1-6/+15
Co-authored-by: Fabien Bruneval <fabien.bruneval@.cea.fr>
2024-05-17libxc: Fix compilation after distribution changes. (#44206)Rémi Lacroix3-186/+22
The release tarballs are not available anymore which means autoconf, automake and libtool are always needed. The NVHPC specific patches don't make sense anymore being that the patched files are not distributed in the new tar files.
2024-05-17libcatalyst: add missing python dependencies (#44224)Alberto Invernizzi1-0/+2
2024-05-17libcint: add v6.1.2, v5.5.0 (#44239)Fabien Bruneval1-1/+3
Co-authored-by: Fabien Bruneval <fabien.bruneval@.cea.fr>
2024-05-17exodusii: only use MPI fortran compiler if +fortran (#44211)Richard Berger1-1/+2
2024-05-17ecflow: versions up to 5.11.4 require boost 1.84 or earlier (#44181)Dom Heinzeller1-1/+2
2024-05-17build_environment.py: deal with rpathing identical packages (#44219)Harmen Stoppels2-7/+42
When multiple gcc-runtime packages exist in the same link sub-dag, only rpath the latest.
2024-05-17hpx: change default of max_cpu_count variant to auto (#44220)Mikael Simberg1-3/+9
2024-05-17FEniCS: add more maintainers (#44240)Jack S. Hale1-1/+1
2024-05-17build(deps): bump actions/checkout from 4.1.5 to 4.1.6 (#44234)dependabot[bot]8-19/+19
Bumps [actions/checkout](https://github.com/actions/checkout) from 4.1.5 to 4.1.6. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](https://github.com/actions/checkout/compare/44c2b7a8a4ea60a981eaca3cf939b5f4305c123b...a5ac7e51b41094c92402da3b24376905380afc29) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-05-17esmf: add v8.6.1 (#44229)Matt Thompson1-0/+1
2024-05-17fenics-dolfinx: add spdlog dependency (#44237)Garth N. Wells1-0/+1
2024-05-16Gitlab CI: Windows Configs (#43967)John W. Parent16-31/+220
Add support for Gitlab CI on Windows This PR adds the config changes required to configure and execute Gitlab pipelines running Windows builds on Windows runners using the existing Gitlab CI infrastructure (and newly added Windows infrastructure). * Adds support for generating child pipelines dispatched to Windows runners * Refactors the relevant pre-scripts, scripts, and post scripts to be compatible with Windows * Adds Windows config section describing Windows jobs * Adds VTK as Windows build stack (to be expanded later) * Modifies proj to build on Windows * Refactors Windows rpath symlinking to avoid system libs and externals --------- Co-authored-by: Ryan Krattiger <ryan.krattiger@kitware.com> Co-authored-by: Mike VanDenburgh <michael.vandenburgh@kitware.com> Co-authored-by: Todd Gamblin <tgamblin@llnl.gov> Co-authored-by: Scott Wittenburg <scott.wittenburg@kitware.com>
2024-05-16trilinos: catch kokkos inconsistency with trilinos (#44209)Paul Kuberry1-1/+26
* trilinos: catch kokkos inconsistency with trilinos * trilinos: update kokkos version range
2024-05-16Prefer llnl.util.symlink.readlink to os.readlink (#44126)John W. Parent16-28/+42
Symlinks on Windows can use longpath prefixes (\\?\); these are fine in the context of win32 API interactions but break numerous facets of Spack behavior that rely on string parsing/matching (archiving, binary distributions, tarball extraction, view regen, etc). Spack's internal readlink method (llnl.util.symlink.readlink) gracefully handles this by removing the prefix and otherwise behaving exactly as os.readlink does, so we should prefer that in all cases.
2024-05-16gaudi: Don't apply the patch if it has already landed upstream (#44180)Thomas Madlener1-0/+1
2024-05-16py-matplotlib: qualify when to do a post install (#44191)Howard Pritchard1-5/+15
* py-matplotlib: qualify when to do a post install Older versions of py-matplotlib don't seem to have some of the files that the post install step is trying to install. Looks like the files first appeared in 3.6.0 and later. Signed-off-by: Howard Pritchard <hppritcha@gmail.com> * Change install paths for older matplotlib --------- Signed-off-by: Howard Pritchard <hppritcha@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>