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2021-01-08amrex: expand CUDA support (#20740)mic841-4/+31
* amrex: expand CUDA support
2021-01-07py-scikit-learn: do parallel builds of C extension (#20733)Robert Underwood1-0/+3
Enabled parallel builds of the C-extension upto the parallelism allowed by spack. https://scikit-learn.org/stable/developers/advanced_installation.html#parallel-builds
2021-01-07New package: py-testfixtures (#20432)Jen Herting1-0/+18
* [py-testfixtures] copied from slpits * [py-testfixtures] removed extends('python') * [py-testfixtures] removed unnecessary dependencies
2021-01-06py-six: 1.15.0 (#20710)Andrew W Elble1-0/+2
* py-six: 1.15.0 * depend on specific python version(s)
2021-01-06Fix dependencies and https address of gitpython (#20669)Joshua S Brown1-11/+15
* Fix dependencies and https address of gitpython * Fix gitpython, use pypi repo, fix checksums * Use pypi * Revert to python 3.4 dependency
2021-01-06eospac: add version 6.4.2beta (#20681)Gabriel Rockefeller1-1/+8
* eospac: add version 6.4.2beta * eospac: clarify EOSPAC "beta" versions Compared to 6.4.1, EOSPAC 6.4.2beta contains only one change, a fix for an inability to read some SESAME files in ASCII format. From the release announcement, EOSPAC 6.4.2beta has been released for general use as the latest (i.e., eospac6-latest) versions. This is a small patch to the previously-released version 6.4.1, which was requested by an affected user. But the "beta" label can cause confusion, especially when a beta version is the new preferred version, as is the case here. As suggested by reviewers, add a comment clarifying EOSPAC's use of "beta".
2021-01-06py-wheel: 0.35.1 (#20713)Andrew W Elble1-0/+1
2021-01-06flatbuffers: python variant (#20706)Andrew W Elble1-0/+14
2021-01-06py-wrapt: 1.12.1 (#20707)Andrew W Elble1-0/+1
2021-01-06py-opt-einsum: 3.3.0 (#20712)Andrew W Elble1-0/+1
2021-01-06py-absl-py: 0.10.0 (#20709)Andrew W Elble1-0/+1
2021-01-06py-google-pasta: 0.2.0 (#20711)Andrew W Elble1-0/+1
2021-01-06nccl: 2.8.3-1 (#20708)Andrew W Elble1-0/+1
2021-01-06qthreads: New version 1.15 (#20704)Erik Schnetter1-0/+1
2021-01-06Update kokkos amd gpu archs and required C++ level (#20096)Robert Maynard1-3/+2
* Remove unsupported AMD GPU archs * Kokkos requires C++14 now
2021-01-06fix gpg user rundir check (#20705)eugeneswalker1-1/+1
2021-01-06add charliecloud/0.21 (#20703)Jordan Ogas1-0/+1
2021-01-06SLEPc: Set SLEPC_DIR in the module file. (#20698)Rémi Lacroix1-0/+4
2021-01-06SEACAS: Update to lastest version (#20701)Greg Sjaardema1-0/+1
2021-01-06intel-oneapi-compilers package: correct module file (#20686)Frank Willmore1-0/+10
This properly sets PATH/CPATH/LIBRARY_PATH etc. to make the Spack-generated module file for intel-oneapi-compilers useful (without this, 'icx' would not be found after loading the module file for intel-oneapi-compilers).
2021-01-06fix mpi lib paths, add virtual provides (#20693)Robert Cohn4-0/+21
2021-01-06Remove hard-coded standard C++ library selection and add more releases in ↵Ye Luo1-2/+2
llvm package (#19933) * Restore OS based Clang default choice of C++ standard library. * Add LLVM 11.0.1 release
2021-01-06parallelio: New Package. (#20673)Toyohisa Kameyama1-0/+42
2021-01-06libc: Return empty libs (#20338)Dr. Christian Tacke1-1/+5
The C-Library for the current compiler should already be used by the compiler. So there is no point in returning any libs for this package. Without this patch: if one uses this as an external package (as intended), then this will can inject system library paths into the build process at the wrong place.
2021-01-06magma: remove -W args from CMakeLists.txt when using nvhpc (#20516)jkelling2-0/+13
2021-01-06arrayfire: added v3.7.3 (#20612)Erik Schnetter1-0/+1
2021-01-06libtheora: fetch a patch instead of storing it in Spack (#20620)Rémi Lacroix2-20/+3
2021-01-06Blitz: added v1.0.2 (#20614)Rémi Lacroix1-1/+5
2021-01-06mfem: link to nveccuda when +sundials+cuda (#20588)Josh Essman1-0/+2
2021-01-06r-genefilter: added v1.72. (#20627)Rémi Lacroix1-1/+3
2021-01-06Nek5000: Improve support for OpenMPI without legacy launchers. (#20622)Rémi Lacroix1-0/+5
Use "srun" for the nekmpi wrapper when we know "mpiexec" won't be available.
2021-01-06Gromacs: simplify hwloc dependency. (#20619)Rémi Lacroix1-2/+1
Additionaly remove the version constraint as newer versions work with OpenMPI 4.X.Y and the new experimental concretizer is now available for testing.
2021-01-06py-scipy: add v1.6.0 (#20637)Adam J. Stewart1-0/+3
2021-01-06GDAL: add v3.2.1 (#20664)Adam J. Stewart1-0/+5
2021-01-06GenFit: added new package (#20653)Tao Lin1-0/+20
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-01-06lbann: make catch2 a "build" and "test" dependency (#20666)Brian Van Essen1-1/+1
2021-01-06dealii: fix concretization problem between trilinos and adol-c (#20606)Luca Heltai1-0/+2
2021-01-06py-sphinx-rtd-theme: remove npm dependency (#20675)Adam J. Stewart1-7/+10
2021-01-06py-numpy: add v1.19.5 (#20684)Adam J. Stewart1-0/+1
2021-01-06qa: use dependabot to update Github ActionsMassimiliano Culpo1-0/+7
2021-01-06fakexrandr: add new package (#20687)Adam J. Stewart1-0/+46
2021-01-06Xorg proto: type build -> link (#20685)Adam J. Stewart118-200/+197
2021-01-06py-picrust2: added new package (#20455)Desmond Orton2-9/+38
2021-01-06update stat and deps with bug fixes (#20690)Gregory Lee6-4/+19
2021-01-06libspatialite: added v5.0.0 (#20293)Sinan1-1/+3
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2021-01-05Rocm-openmp-extras 4.0 version updates (#20692)estewart081-11/+27
2021-01-05bump up version for rocm-4.0.0 release (#20691)Sreenivasa Murthy Kolam3-8/+12
2021-01-05alps: fix for latest gcc and test bug (#20462)ketsubouchi4-2/+89
* gcc build OK * gcc mc-01 OK * time test problem * remove comment and debug * use climit * TAB to spaces * comment
2021-01-05concretizer: make rules on virtual packages more linearMassimiliano Culpo1-11/+9
fixes #20679 In this refactor we have a single cardinality rule on the provider, which triggers a rule transforming a dependency on a virtual package into a dependency on the provider of the virtual.
2021-01-05spack python: allow use of IPython (#20329)Vanessasaurus3-13/+77
This adds a -i option to "spack python" which allows use of the IPython interpreter; it can be used with "spack python -i ipython". This assumes it is available in the Python instance used to run Spack (i.e. that you can "import IPython").