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2023-07-14podio: add 0.16.6 tag and mark older releases as deprecated (#38891)Thomas Madlener1-5/+26
* podio: Add latest tag * podio: Deprecate older versions
2023-07-14new release and bug fix on check() (#38901)G-Ragghianti2-4/+11
2023-07-14GDAL: add v3.7.1 (#38884)Adam J. Stewart1-0/+1
2023-07-14Remove unused context manager (#38897)Harmen Stoppels1-8/+0
2023-07-14adios2: add catalyst variant (#38852)Vicente Bolea1-0/+8
2023-07-14ci: remove aws-ahug (#38777)Harmen Stoppels4-530/+0
2023-07-14build(deps): bump actions/setup-python from 4.6.1 to 4.7.0 (#38887)dependabot[bot]5-11/+11
Bumps [actions/setup-python](https://github.com/actions/setup-python) from 4.6.1 to 4.7.0. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](https://github.com/actions/setup-python/compare/bd6b4b6205c4dbad673328db7b31b7fab9e241c0...61a6322f88396a6271a6ee3565807d608ecaddd1) --- updated-dependencies: - dependency-name: actions/setup-python dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-14py-protobuf: add 4.23.3 (#38614)Manuela Kuhn3-2/+8
* py-protobuf: add 4.23.3 * protobuf: add 3.23.3 * py-protobuf: disable cpp variant for @4.22:
2023-07-14py-simplejson: add 3.19.1 (#38898)Manuela Kuhn1-1/+1
2023-07-14py-lightly: add v1.4.12 (#38883)Adam J. Stewart1-0/+1
2023-07-14Use sirius namespacing for cmake (#38707)Taillefumier Mathieu1-23/+31
* Use sirius namespacing for cmake * Formating * Fix lapack variables
2023-07-14xrootd: new versions 5.6.0, 5.6.1 (#38844)Wouter Deconinck1-2/+6
2023-07-14Fix issue on cray with super call (#38895)Rocco Meli1-1/+1
2023-07-14disable superlu test (#38894)Harmen Stoppels1-15/+0
2023-07-13Bugfix/spack spec: read and use the environment concretizer:unification ↵Tamara Dahlgren2-4/+62
option (#38248) * Bugfix: spack.yaml concretizer:unify needs to be read and used * Optional: add environment test to ensure configuration scheme is used * Activate environment in unit tests A more proper solution would be to keep an environment instance configuration as an attribute, but that is a bigger refactor * Delay evaluation of Environment.unify * Slightly simplify unit tests --------- Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-07-13Update TensorFlow ecosystem (#38747)Adam J. Stewart4-87/+43
* Update TensorFlow ecosystem * Re-add +cpp * Do not use system protobuf * Let bazel auto-detect macOS SDK version * Unnecessary duplicated dep * Remove unused import
2023-07-13eccodes: fix a few issues in the recipe (#38873)Sergey Kosukhin1-10/+12
* explicitly disable the Python 2 interface * drop obsolete cmake argument HDF5_ROOT for newer versions * set PYTHON_EXECUTABLE only when needed
2023-07-13FleCSI updates (#38870)Richard Berger1-3/+9
* flecsi: update maintainers * flecsi: allow newer HPX to be used * flecsi: propagate ROCm variants when using legion * flecsi: add v2.2.1
2023-07-13Add keep_werror = "specific" to mpich (#38861)Mikael Simberg1-0/+2
2023-07-13ccache: 4.8.2 (#38874)Harmen Stoppels1-0/+1
2023-07-13ca-certificates-mozilla: add 2023-05-30 (#38875)Harmen Stoppels1-0/+5
2023-07-13foonathan-memory: add 0.7-3 (#38879)Manuela Kuhn1-0/+4
2023-07-13spack buildcache push: improve argparse (#38876)Harmen Stoppels2-10/+13
2023-07-13mirrors: distinguish between source/binary mirror; simplify schema (#34523)Harmen Stoppels13-302/+484
Allow the following formats: ```yaml mirrors: name: <url> ``` ```yaml mirrors: name: url: s3://xyz access_pair: [x, y] ``` ```yaml mirrors: name: fetch: http://xyz push: url: s3://xyz access_pair: [x, y] ``` And reserve two new properties to indicate the mirror type (e.g. mirror.spack.io is a source mirror, not a binary cache) ```yaml mirrors: spack-public: source: true binary: false url: https://mirror.spack.io ```
2023-07-13spack audit: allow skipping version checks from package.py (#28372)Massimiliano Culpo10-5/+31
A few packages have version directives evaluated within if statements, conditional on the value of `platform.platform()`. Sometimes there are no cases for e.g. platform=darwin and that causes a lot of spurious failures with version existence audits. This PR allows expressing conditions to skip version existence checks in audits and avoid these spurious reports.
2023-07-13Add type hints to spack.installer (#38872)Harmen Stoppels4-623/+670
2023-07-13Add missing space in error msg (#38863)Adam J. Stewart1-1/+1
2023-07-13build(deps): bump docker/setup-buildx-action from 2.9.0 to 2.9.1 (#38868)dependabot[bot]1-1/+1
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.9.0 to 2.9.1. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/2a1a44ac4aa01993040736bd95bb470da1a38365...4c0219f9ac95b02789c1075625400b2acbff50b1) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-13Restrict py-pip version for packages using --install-option (#38837)Manuela Kuhn5-0/+10
2023-07-13Standardize subcommand help strings (#38804)Adam J. Stewart42-348/+295
### Rationale While working on #29549, I noticed a lot of inconsistencies in our argparse help messages. This is important for fish where these help messages end up as descriptions in the tab completion menu. See https://github.com/spack/spack/pull/29549#issuecomment-1627596477 for some examples of longer or more stylized help messages. ### Implementation This PR makes the following changes: - [x] help messages start with a lowercase letter. - [x] Help messages do not end with a period - [x] the first line of a help message is short and simple longer text is separated by an empty line - [x] "help messages do not use triple quotes" """(except docstrings)""" - [x] Parentheses not needed for string concatenation inside function call - [x] Remove "..." "..." string concatenation leftover from black reformatting - [x] Remove Sphinx argument docs from help messages The first 2 choices aren't very controversial, and are designed to match the syntax of the `--help` flag automatically added by argparse. The 3rd choice is more up for debate, and is designed to match our package/module docstrings. The 4th choice is designed to avoid excessive newline characters and indentation. We may actually want to go even further and disallow docstrings altogether. ### Alternatives Choice 3 in particular has a lot of alternatives. My goal is solely to ensure that fish tab completion looks reasonable. Alternatives include: 1. Get rid of long help messages, only allow short simple messages 2. Move longer help messages to epilog 3. Separate by 2 newline characters instead of 1 4. Separate by period instead of newline. First sentence goes into tab completion description The number of commands with long help text is actually rather small, and is mostly relegated to `spack ci` and `spack buildcache`. So 1 isn't actually as ridiculous as it sounds. Let me know if there are any other standardizations or alternatives you would like to suggest.
2023-07-13vtk-m: modernize vtk-m recipe (#38726)Vicente Bolea1-108/+38
2023-07-12ci: populate caches in before script (#38762)Harmen Stoppels1-0/+2
* ci: run spack list in power ci Let's see if Spack itself is the bottleneck in CI... * rebuild curl in CI * more of the same please! * drop the profiler * undo rebuildme test in ci variant * add comment for posterity * enable profiling * trigger CI * See how it goes now that perf regressions are fixed on develop * try shorter poll intervals * Revert "try shorter poll intervals" This reverts commit d60c34ad3eceead0c13a5277cf8e783fd42b7458. * Remove spec.format call in Database._get_matching_spec_key * once more in ci please * undo irrelevant changes * run spack list in before script * test in ci * -: * Undo CI testing
2023-07-12build(deps): bump docker/setup-buildx-action from 2.8.0 to 2.9.0 (#38783)dependabot[bot]1-1/+1
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2.8.0 to 2.9.0. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/16c0bc4a6e6ada2cfd8afd41d22d95379cf7c32a...2a1a44ac4aa01993040736bd95bb470da1a38365) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2023-07-12containers: retain shallow git data (#37734)Jonathon Anderson3-8/+14
2023-07-12Add path to MPI executables to ^mpi dependents (#35758)Michael Fink1-3/+7
2023-07-12Package papi: update for smoke tests (#38711)G-Ragghianti1-2/+25
* Adding papi smoke tests * smoke tests * update to new test framework
2023-07-12Fix fmt and spdlog versions for micromamba. (#38739)Stephan Grein1-4/+4
The spdlog project precisely states/depends which fmt version should be used for compatibility. Latest version 1.11.0 depends explictly on fmt 9.1.0. Without fixed version micromamba build fails when using spack install micromamba on e.g. Rockylinux 8.5.
2023-07-12py-callmonitor: added new package (#38764)Dax Lynch1-0/+20
* py-callmonitor: added new package * depends_on numpy * Update var/spack/repos/builtin/packages/py-callmonitor/package.py Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com> --------- Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com> Co-authored-by: eugeneswalker <38933153+eugeneswalker@users.noreply.github.com> Co-authored-by: Manuela Kuhn <36827019+manuelakuhn@users.noreply.github.com>
2023-07-12adios2: add aws variant (#38857)Vicente Bolea1-0/+8
2023-07-12Add gettext as a dependency of bison (#35979)Samuel Browne1-0/+1
The 'bison' executable requires libtextstyle to run. I think this was usually satisfied because gettext is often installed with the OS, or brought in accidentally via perl/m4. Looks like the libtextstyle library dependency started in Bison 3.4
2023-07-12openfoam-org: add precision option (#38746)kjrstory1-1/+15
2023-07-12Static-analysis-suite: mark versions deprecate for this obsolete package ↵Andre Sailer1-3/+15
(#38754)
2023-07-12Patch broken CMake handling when no architectures are found in HIP package ↵Mikael Simberg1-0/+7
(#37022)
2023-07-12vtk-m: correct cuda_arch variant behavior (#38697)Vicente Bolea5-12/+169
Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2023-07-12Add conflict for hpx on ARM (#38812)Mikael Simberg1-2/+7
HPX requires use of Boost.Context on ARM.
2023-07-12apptainer: add flag_handler to discard spack flags (#38843)snehring1-0/+5
2023-07-12flux-sched: add v0.28.0 (#38860)Vanessasaurus1-0/+1
Co-authored-by: github-actions <github-actions@users.noreply.github.com>
2023-07-12hepmc3: add protobuf variant and update flags (#38841)Seth R. Johnson1-9/+14
2023-07-12py-torch: rename master to main (#38858)Adam J. Stewart1-2/+3
2023-07-12Fix build of CentOS stream docker image (#38824)Massimiliano Culpo1-4/+4
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