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2021-03-30Fix clearing cache of InternalConfigScope (#22609)Harmen Stoppels3-38/+47
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2021-03-30Update hiop package (#22232)Asher Mancinelli1-18/+124
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-03-30py-numpy: Add the setting to use fujitsu-ssl2 (#22604)takanori-ihara1-0/+22
* py-numpy: Add the setting to use fujitsu-ssl2 * py-numpy: Fix for comments
2021-03-30Bugfixes in LBANN software stack identified by clingo (#22554)Brian Van Essen4-39/+26
* Fixed a bug in the DiHydrogen package where the variant legacy was changed to distconv and wasn't fully propagated. Cleaned up the openmp variants on the blas library packages in DiHydrogen and Elemental. Extended support for Aluminum v1.0 in LBANN, Hydrogen, and DiHydrogen. Fixed a when clause in the LBANN dependencies. * Removed the upper range limit for the Aluminum library dependence * Update var/spack/repos/builtin/packages/dihydrogen/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-03-30spath: new releases (#22625)Cameron Stanavige1-0/+3
This commit adds the url and the two releases/versions to the package.
2021-03-29move binary indices are stored into the misc_cache (#22500)Danny McClanahan2-13/+20
Remote buildcache indices need to be stored in a place that does not require writing to the Spack prefix. Move them from the install_tree to the misc_cache.
2021-03-29bugfix for active when pkg is already active error (#22587)Cyrus Harrison1-2/+7
* bugfix for active when pkg is already active error Co-authored-by: Greg Becker <becker33@llnl.gov>
2021-03-29Externals are preferred even when they have non-default variant valuesMassimiliano Culpo5-1/+58
fixes #22596 Variants which are specified in an external spec are not scored negatively if they encode a non-default value.
2021-03-29Enforce uniqueness of the version_weight atom per nodeMassimiliano Culpo5-7/+49
fixes #22565 This change enforces the uniqueness of the version_weight atom per node(Package) in the DAG. It does so by applying FTSE and adding an extra layer of indirection with the possible_version_weight/2 atom. Before this change it may have happened that for the same node two different version_weight/2 were in the answer set, each of which referred to a different spec with the same version, and their weights would sum up. This lead to unexpected result like preferring to build a new version of an external if the external version was older.
2021-03-29bumpup version for hipify-clang,rocm-gdb-api,rocm-gdb for rocm-4.1.rel (#22622)Sreenivasa Murthy Kolam3-6/+9
2021-03-29Make stage use concrete specs from environment (#22320)Harmen Stoppels2-1/+121
* Make stage use concrete specs from environment Same as in https://github.com/spack/spack/pull/21642, the idea is that we want to easily stage a package that fails to build in a complex environment. Instead of making the user create a spec by hand (basically transforming all the rules in the environment manifest into a spec, defying the purpose of the environment...), use the provided spec as a filter for the already concretized specs. This also speeds up things, cause we don't have to reconcretize.
2021-03-29ELPA: Add missing Python build dependency. (#22466)Rémi Lacroix2-0/+12
Also patch the "manual_cpp" Python script with proper shebang to ensure the Spack provided Python is used instead of the system Python.
2021-03-29Add "spack [cd|location] --source-dir" (#22321)Harmen Stoppels3-58/+82
2021-03-29hdf5: fix link error in dependent packages with %fj (#22512)Tomoki, Karatsu1-0/+4
2021-03-29libfuse: run system install script based on a variant (#22518)Harmen Stoppels2-1/+37
2021-03-29py-matplotlib: add v3.4.0 (#22574)Adam J. Stewart1-6/+10
2021-03-29py-numpy: add v1.20.2 (#22603)Adam J. Stewart1-0/+1
2021-03-28graphite2: add python@3.6: as dependency (#22126)darmac1-0/+2
* graphite2: add python@3.6: as dependency * graphite2: refine python type to run * graphite2: change phthon to test type
2021-03-28Flang default is False. Include a warning to deter people from using it. ↵Nichols A. Romero1-2/+3
(#22524) * Flang default is False. Include a warning to deter people from using it. * Fix flake8 issue.
2021-03-28mpich: fix device detection (#22502)Adam J. Stewart1-5/+2
2021-03-28py-joblib: add v1.0.1 (#22501)Adam J. Stewart1-3/+13
2021-03-28gdrcopy: add v2.2 (#22528)Hervé Yviquel1-8/+2
2021-03-28qt: fix qt@4+gui on darwin (#22602)Seth R. Johnson1-3/+3
2021-03-28mpfr: new version 4.1.0 (#22541)Robert Mijakovic1-0/+2
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-03-28py-scipy: add v1.6.2 (#22543)Adam J. Stewart1-17/+22
2021-03-28mumps: new version 5.3.5 (#22542)Robert Mijakovic0-0/+0
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-03-28hepmc3: add version 3.2.3 (#22601)Valentin Volkl1-0/+1
2021-03-28edm4hep: add version 0.3.1 (#22600)Valentin Volkl1-0/+1
2021-03-28[dd4hep] add new version (#22599)Valentin Volkl1-0/+1
2021-03-27gmp: add version 6.2.1 (#22570)Jen Herting1-0/+1
2021-03-27opensubdiv: add version 3.4.3 and change version number format (#22571)Jen Herting1-1/+6
2021-03-27mochi-margo: add v0.9.2, v0.9.3 and v0.9.4 (#22368)Phil Carns2-1/+4
Also mark a margo version deprecated that was previously omitted by mistake
2021-03-27liblouis: new package (#22141)darmac1-0/+21
2021-03-27New R package vcfr (#22495)Desmond Orton1-0/+39
2021-03-26ucx: add v1.9.0, v1.10.0 (#22527)Hervé Yviquel1-1/+2
2021-03-26py-torchvision: add v0.9.1 (#22556)Adam J. Stewart1-1/+3
2021-03-26py-torch: add v1.8.1 (#22546)Adam J. Stewart1-0/+1
2021-03-26mesa: new version (#22538)Robert Mijakovic1-0/+2
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-03-26llvm: new version (#22540)Robert Mijakovic1-0/+1
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
2021-03-26[intel-oneapi-mpi] Add compiler wrappers to dependent build stage (#22468)Stephen Sachs1-0/+8
This adds MPICC=/path/to/intel-oneapi/mpicc etc to he dependents build stage enabling the use of the compiler wrappers. Co-authored-by: Stephen Sachs <stesachs@amazon.com>
2021-03-26revbayes: Version updated to 1.1.1 (#22555)Desmond Orton1-0/+1
2021-03-26Update var/spack/repos/builtin/packages/papyrus/package.py (#22560)Jungwon Kim1-1/+2
2021-03-26llvm-amdgpu: Fixes "UnboundLocalError: local variable referenced before ↵Jan Ciesko1-0/+1
assignment" (#22562) Co-authored-by: Jan Ciesko <jciesko@sandia.gov>
2021-03-26cmake: Add Version 3.20.0 (#22569)Dr. Christian Tacke1-0/+1
2021-03-26Add select mkl libs (#22580)Robert Cohn1-0/+6
2021-03-26charmpp: rename master to main (#22582)Matthias Diener1-1/+1
See https://github.com/UIUC-PPL/charm/pull/3303 for context.
2021-03-26update ascent and friends for the ascent 0.7.0 release (#22428)Cyrus Harrison7-60/+95
2021-03-26clingo: modify recipe for bootstrapping (#22354)Massimiliano Culpo4-16/+83
* clingo: modify recipe for bootstrapping Modifications: - clingo builds with shared Python only if ^python+shared - avoid building the clingo app for bootstrapping - don't link to libpython when bootstrapping * Remove option that breaks on linux * Give more hints for the current Python * Disable CLINGO_BUILD_PY_SHARED for bootstrapping * bootstrapping: try to detect the current python from std library This is much faster than calling external executables * Fix compatibility with Python 2.6 * Give hints on which compiler and OS to use when bootstrapping This change hints which compiler to use for bootstrapping clingo (either GCC or Apple Clang on MacOS). On Cray platforms it also hints to build for the frontend system, where software is meant to be installed. * Use spec_for_current_python to constrain module requirement
2021-03-26ASP-based solver: model disjoint sets for multivalued variants (#22534)Massimiliano Culpo4-2/+64
* ASP-based solver: avoid adding values to variants when they're set fixes #22533 fixes #21911 Added a rule that prevents any value to slip in a variant when the variant is set explicitly. This is relevant for multi-valued variants, in particular for those that have disjoint sets of values. * Ensure disjoint sets have a clear semantics for external packages
2021-03-26julia: new version (#22537)Robert Mijakovic1-0/+2
Co-authored-by: Robert Mijakovic <robert.mijakovic@lrz.de>
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