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2024-03-02perl-test-xml and deps: new packages (#42870)Arne Becker2-0/+61
- Adds perl-test-xml and dependency: - Adds perl-xml-semanticdiff
2024-03-02legion: Add 23.09.0 and 23.12.0, remove control_replication. (#42915)Elliott Slaughter2-4/+5
* legion: Add 23.09.0 and 23.12.0, remove control_replication. The branch control_replication has been merged to master and should no longer be used. * flecsi: Switch to Legion master branch. Legion control_replication has been merged to master. * Fix Legion 23.09.0 and 23.12.0 build for ROCm 6.
2024-03-02Bazel: fix patching of 4.2.4 (#42938)Adam J. Stewart1-1/+1
2024-03-02Add ncvis package and add option to wxwidgets (#38204)Brian Vanderwende2-0/+38
* Add ncvis and opengl option for wxwidgets * Style fixes for ncvis * Replace in with satisfies for opengl constraint Co-authored-by: Alec Scott <alec@bcs.sh> --------- Co-authored-by: Alec Scott <alec@bcs.sh>
2024-03-02Added NCCL version 2.20.3-1 (#42951)Zachary Newell1-0/+1
Added NCCL version 2.20.3-1 to the package.py. I tested compiling it and running nccl-tests on Ubuntu 22.04.
2024-03-01py-numba: add `tbb` variant (#42930)Mosè Giordano1-0/+8
Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2024-03-01Seacas: fix patch hash (#42934)Chris Marsh1-1/+1
2024-02-29libogg does not build a shared libary with cmake (#42877)Chris Marsh1-2/+22
* when built with cmake, libogg does not build with a shared libary by default. This resolves that * spack style fixes * Clean up imports * enforce +pic when +shared
2024-02-29Add Quantum ESPRESSO 7.3.1 (#42927)Ye Luo1-0/+1
2024-02-29Show extension commands with spack -h (#41726)Tim Fuller1-5/+7
* Execute `args.help` after setting main options so that extension commands will show with `spack -h` --------- Co-authored-by: psakievich <psakiev@sandia.gov>
2024-02-29Support environment variable expansion inside module projections (#42917)psakievich1-2/+4
2024-02-29initial commit to fix ck gpu targets cmake arg (#42924)afzpatel1-4/+3
2024-02-29reduce size of e4s to deal with large rebuild artifact (#42884)eugeneswalker1-182/+182
2024-02-29linaro-forge: added 23.1.2 version (#42922)joscot-linaro1-0/+9
2024-02-29Update fdb package.py with libs (#42874)Victoria Cherkas1-0/+4
* Update fdb package.py with libs * Formatting
2024-02-29Update riscv-gnu-toolchain package.py (#42893)Wanlin Wang1-1/+70
* Update package.py 1. add one compiler type named 'musl' 2. add a variant name 'multilib' 3. add a variant name 'cmodel' * Added one compiler type named 'musl'. Added a variant named 'multilib'. Added a variant named 'cmodel'. Added several versions. * aarch64 is not supported.
2024-02-29py-keras: add v3.0.5 (#42697)Adam J. Stewart7-18/+107
2024-02-29vtk: Update proj dependency (#42797)Chris Marsh1-1/+1
* Update proj dependency to enable newer proj usage * Allow for any proj version
2024-02-29build(deps): bump docker/setup-buildx-action from 3.0.0 to 3.1.0 (#42883)dependabot[bot]1-1/+1
Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 3.0.0 to 3.1.0. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](https://github.com/docker/setup-buildx-action/compare/f95db51fddba0c2d1ec667646a06c2ce06100226...0d103c3126aa41d772a8362f6aa67afac040f80c) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-02-29libevent: remove autotools build deps again (#42908)Harmen Stoppels1-7/+0
The deps were added in #40945 to make it work on macOS 11, because the old configure scripts only detect macOS 10. Apparently people reported the autoreconf script caused issues, later fixed in #41057. However, also with that fix, things are incorrect, cause people now report: ``` libtool: You should recreate aclocal.m4 with macros from libtool 2.4.7 libtool: and run autoconf again. ``` HOWEVER, all this is unnecessary, because the underlying issue was already fixed long ago, it's just that it regressed at some point, but it's back in place since #41205.
2024-02-29ginkgo: add PAPI SDE support (#39425)Terry Cojean1-2/+5
Signed-off-by: Terry Cojean <terry.cojean@kit.edu> Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-02-28perl-readonly-xs: new package (#42897)Arne Becker1-0/+25
This adds Readonly::XS. Since this module can not be used by itself, the Spack package comes with a test override. This anticipates that the perl builder will one day have a generic standalone module usage test.
2024-02-28perl-test-json, perl-json-any: New packages (#42896)Arne Becker2-0/+63
* perl-test-json: New package Adds Test::JSON * Adds perl-json-any
2024-02-28perl-test-xpath: New package (#42895)Arne Becker1-0/+30
Adds Test::XPath
2024-02-28perl-uri-find: New package (#42894)Arne Becker1-0/+30
Adds URI::Find
2024-02-28perl-net-cidr-lite: new package (#42898)Arne Becker1-0/+27
* perl-net-cidr-lite: new package Adds Net::CIDR::Lite * Add license
2024-02-28perl-mojolicious: new package (#42899)Arne Becker1-0/+29
Adds Mojolicious
2024-02-28perl-cache-memcached and deps: new packages (#42911)Arne Becker2-0/+54
Adds Cache::Memcached and its dependencies. Installed OK with build-time tests. Added dependencies: - Cache::Memcached
2024-02-28Unit tests: skip tests that intermittently fail on Windows (#42909)Harmen Stoppels2-0/+2
2024-02-28mysql: explicity cast python command to str in _fix_dtrace_shebang() (#40781)Tom Payerle1-1/+1
This should fix issue #40780 We explicitly cast self.spec["python"].command to str in the filter_file call in _fix_dtrace_shebang to avoid the error ==> Error: TypeError: expected str, bytes or os.PathLike object, not Executable Not sure why the error is appearing (is it only for specific python versions, etc?), but the fix should be quite safe.
2024-02-28bison: remove unnessisary deps, add variant for colored output (#42209)Alec Scott1-4/+4
2024-02-28perl-yaml-syck: New package (#42892)Arne Becker1-0/+29
Adds YAML::Syck
2024-02-28perl-catalyst-runtime and deps: new packages (#42886)Arne Becker37-0/+1209
* perl-catalyst-runtime and deps: new packages This add Perl Catalyst::Runtime and its missing dependencies. Adds: - perl-catalyst-runtime - perl-apache-logformat-compiler - perl-cgi-simple - perl-cgi-struct - perl-class-c3-adopt-next - perl-cookie-baker - perl-data-dump - perl-devel-stacktrace-ashtml - perl-filesys-notify-simple - perl-getopt-long-descriptive - perl-hash-multivalue - perl-http-body - perl-http-entity-parser - perl-http-headers-fast - perl-http-multipartparser - perl-moosex-emulate-class-accessor-fast - perl-moosex-getopt - perl-moosex-methodattributes - perl-moosex-role-parameterized - perl-path-class - perl-plack - perl-plack-middleware-fixmissingbodyinredirect - perl-plack-middleware-methodoverride - perl-plack-middleware-removeredundantbody - perl-plack-middleware-reverseproxy - perl-plack-test-externalserver - perl-posix-strftime-compiler - perl-stream-buffered - perl-string-rewriteprefix - perl-test-mocktime - perl-test-tcp - perl-test-time - perl-test-trap - perl-tree-simple - perl-tree-simple-visitorfactory - perl-uri-ws - perl-www-form-urlencoded
2024-02-28AOCC: add v4.2.0 (#42891)AMD Toolchain Support1-1/+5
Co-authored-by: vijay kallesh <Vijay-teekinavar.Kallesh@amd.com>
2024-02-28Upgrade TensorFlow Probability with newer versions (#42673)Jonas Eschle1-9/+40
* enh: add newer versions * enh: add newer versions * format * fix typo * Update package.py * make jax and TF optional dependencies * style fix * remove dependency * remove old TFP version * fix: style
2024-02-28ParaView Release Candidate 5.12.0-RC3 (#42654)kwryankrattiger1-1/+1
2024-02-28perl-json-xsand deps: new packages (#42904)Arne Becker3-0/+84
Adds JSON::XS and its deps: - Canary::Stability - Types::Serialiser
2024-02-28e4s: new packages: glvis, laghos (#42847)eugeneswalker5-4/+14
* e4s: new packages: glvis, laghos * gl: require: osmesa * be explicit: glvis ^llvm so that llvm-amdgpu not chosen * glvis fails on oneapi stack due to issue 42839
2024-02-28versions: simplify list if union not disjoint (#42902)Harmen Stoppels2-25/+48
Spack merges ranges and concrete versions if they have non-empty intersection. That is not enough for adjacent version ranges. This commit ensures that disjoint ranges in version lists are simplified if their union is not disjoint: ```python "@1.0:2.0,2.1,2.2:3,4:6" # simplifies to "@1.0:6" ```
2024-02-28package_py_systemd_python_improve (#42865)Sinan1-0/+3
Co-authored-by: sbulut <sbulut@3vgeomatics.com>
2024-02-28Add package zfit interface (#42666)Jonas Eschle1-0/+29
* Add package zfit interface * add maintainer * [@spackbot] updating style on behalf of jonas-eschle * Update package.py * Update package.py * Update package.py * [@spackbot] updating style on behalf of jonas-eschle * Update var/spack/repos/builtin/packages/py-zfit-interface/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py --------- Co-authored-by: jonas-eschle <jonas-eschle@users.noreply.github.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-02-27C-Blosc2: Fuzzer Tests (#42881)Axel Huebl1-0/+1
The fuzzer tests are a bit flaky and have linker issues on clang. We generally only should build them in testing.
2024-02-27e4s oneapi: remove outdated package preferences (#42875)eugeneswalker1-7/+0
2024-02-27Adding dependency of roctracer-dev and patch in miopen-hip (#42637)renjithravindrankannath3-2/+47
2024-02-27openexr: Add custom libs property (#42274)Tom Payerle1-0/+11
Libraries for openexr are named libOpenEXR*.so, etc., so the default libs handler in spec does not find them. Add a custom libs property to address this. Partial fix for #42273 Co-authored-by: payerle <payerle@users.noreply.github.com>
2024-02-27regtools: add new package (#42852)George Young1-0/+22
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2024-02-27btop: add cmake version restriction (#42835)YI Zeping1-0/+2
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2024-02-27bazel: allow offline build of major versions 5 and 6 (#41575)Lydéric Debusschère1-6/+51
* bazel: allow offline build of major versions 5 and 6; add variant download_data * bazel: add maintainer LydDeb * bazel: install offline only; remove variant download_data * bazel: fix variable name: resource_dico --> resource_dictionary * bazel: fix style * bazel: fix the build of version 4 * bazel: add comment about resources * bazel: access to resource stages with self.stage * bazel: add except to solve AttributeError: 'Stage' object has no attribute 'resource' --------- Co-authored-by: LydDeb <lyderic.debusschere@eolen.com>
2024-02-27delphes: use the same C++ standard as in ROOT (#42816)Juan Miguel Carceller1-12/+2
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2024-02-27garfieldpp: Add version 5.0 (#42817)Juan Miguel Carceller1-0/+1
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
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