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2023-06-24gaudi: new versions 36.[11-14] (#38498)Wouter Deconinck1-0/+4
2023-06-24hpctoolkit: convert to new stand-alone test process (#35752)Tamara Dahlgren1-15/+20
2023-06-24clp and osi depend on pkgconfig (#31505)miheer vaidya2-0/+2
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com> Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2023-06-24GSI-ncdiag: add v1.1.0 and v1.1.1. (#38196)David Huber1-1/+3
Co-authored-by: [David Huber] <[david.huber@noaa.gov]>
2023-06-24Fix syntax to set default target in aws-pcluster pipelines (#38048)Stephen Sachs5-5/+5
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
2023-06-24libzmq: Fix static assertion failure with gcc-13 (#38391)Dennis Klein1-0/+9
2023-06-24pfunit: fix the max_array_rank variant definition (#38528)Matthew Thompson1-2/+2
2023-06-24DMTCP: add v3.0.0. (#38307)Kapil Arya1-1/+3
2023-06-24lammps: new verisons (#38532)Richard Berger1-4/+6
2023-06-24Fixes openmpi configure args for multinode execution on slurm (#38403)Gurkirat Singh1-5/+15
Remove `--enable-mca-no-build=btl-uct` check for ucx spec as it is already fixed in the openmpi open-mpi/ompi#6666
2023-06-24range-v3: remove overbroad boost dependence (#38539)Chris Green1-8/+10
Co-authored-by: greenc-FNAL <greenc-FNAL@users.noreply.github.com>
2023-06-23libEnsemble: add v0.10.0 (#37954)Stephen Hudson1-4/+6
* libEnsemble: add v0.10.0 * Make new deps required * Fixes to deps * Update var/spack/repos/builtin/packages/py-libensemble/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Fix build, run * Reorder required deps --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-23py-pytest: add 7.3.2 (#38522)Manuela Kuhn1-8/+8
* py-pytest: add 7.3.2 * [@spackbot] updating style on behalf of manuelakuhn * Swap py-importlib-metadata dependency order * Restrict python version for older versions
2023-06-23Add recipe for iterative-stats (#38039)mschouler1-0/+35
* Add recipe for iterative-stats * Fix branch name and remove comment * Add git link * Add package maintainer * Enforce multiple requested changes * Update var/spack/repos/builtin/packages/py-iterative-stats/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update checksum * Fix openturns dependency specification * Add python variant spec to openturns --------- Co-authored-by: Marc Schouler <marc.schouler@inria.fr> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-23Added version 0.33 (#38534)julian-zeidler1-0/+1
2023-06-23fix version dependency logic (#38535)G-Ragghianti1-1/+1
2023-06-23zlib-ng: add latest, default to drop in replacement of zlib (#37370)Harmen Stoppels1-6/+25
2023-06-23Add numa variant in ucx package (#38423)Gurkirat Singh1-1/+3
2023-06-23spack buildcache sync (--manifest-glob <glob> | <src> <dest>) are mutually ↵Harmen Stoppels1-3/+6
exclusive (#38533)
2023-06-22py-pytz: add 2023.3 (#38525)Manuela Kuhn1-0/+2
2023-06-22py-qmtest: add patch for the removed bdist_wininst class (#38253)Juan Miguel Carceller2-0/+23
Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
2023-06-22py-python-gitlab: add 3.15.0 (#38524)Manuela Kuhn2-6/+13
2023-06-22Add 1606 (#38511)Paul R. C. Kent1-0/+1
2023-06-22Emblmygff3 (#38515)snehring2-0/+29
* py-bcbio-gff: adding new version 0.7.0 * emblmygff3: adding new package * emblmygff3: adding py-setuptools dep
2023-06-22rust: Add v1.70.0 and simplify package bootstrap (#38311)Alec Scott2-359/+209
* Add rust v1.70.0 and simplify package logic by moving bootstrap to dedicated package * Fix formatting of rust-bootstrap package file * Re-enable Rust as extendable * Add nightly version to rust and rust-bootstrap * Manually inject openssl certs into environment * Add master and beta versions to rust * Add additional documentation for using rust development releases * Remove @AndrewGaspar as maintainer
2023-06-22py-packaging: add 23.1 (#38417)Manuela Kuhn1-0/+1
2023-06-22VASP package: Zen4 Support (#36800)AMD Toolchain Support1-19/+89
* zen4 support for vasp * encourage openmp support in fftw/blas when +openmp * enable gamma and non-collinear builds
2023-06-22freefem: add missing dependencies (#38290)Michael Kuhn1-4/+12
Also remove the custom `autoreconf` method as it does not seem to be necessary and potentially hides useful output provided by the default.
2023-06-22py-notebook: add 6.5.4 (#38415)Manuela Kuhn1-26/+27
* py-notebook: add 6.5.4 * [@spackbot] updating style on behalf of manuelakuhn * Update var/spack/repos/builtin/packages/py-notebook/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Fix version of py-nbclassic dependency --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-22Add LFortran (#30901)Ondřej Čertík1-0/+41
It installs the LFortran runtime library and LFortran can compile codes to binaries. The interactive mode does not work yet with LLVM > 11, that has to be fixed upstream. Co-authored-by: Wileam Y. Phan <50928756+wyphan@users.noreply.github.com>
2023-06-22py-numexpr: add 2.8.4 (#38416)Manuela Kuhn1-5/+7
2023-06-22open turns: Add libxml2 dependency and increase version to v1.20 (#38038)mschouler1-1/+5
* Add libxml2 dependency and increase version to v1.20 * Update var/spack/repos/builtin/packages/openturns/package.py Co-authored-by: Alec Scott <alec@bcs.sh> * Add v19 * Add libxml2 variant * Fix variant specification --------- Co-authored-by: Marc Schouler <marc.schouler@inria.fr> Co-authored-by: Alec Scott <alec@bcs.sh>
2023-06-22py-platformdirs: add 3.5.3 (#38435)Manuela Kuhn2-1/+6
* py-platformdirs: add 3.5.3 * py-typing-extensions: add 4.6.3
2023-06-22py-prompt-toolkit: add 3.0.38 (#38472)Manuela Kuhn1-25/+10
2023-06-22py-patsy: add 0.5.3 (#38433)Manuela Kuhn1-2/+5
2023-06-22qt: new version 5.15.10 (#38489)Wouter Deconinck1-0/+1
No changes to the build system, no changes to `package.py` needed. Changelog: https://github.com/qt/qtbase/compare/v5.15.9-lts-lgpl...v5.15.10-lts-lgpl Main change taking up space: - bundled 3rdparty/pcre2 updated from 10.39 to 10.40 (spack now includes 10.42, and we don't put specific version requirements in `package.py`)
2023-06-22hpx: Add conflict with some GCC versions and `+rocm` due to `valarray` bug ↵Mikael Simberg1-0/+8
(#38297) * hpx: Add conflict with some GCC versions and +rocm due to valarray bug https://gcc.gnu.org/bugzilla/show_bug.cgi?id=103022 * remove conflict for %gcc@11.1.0 since there is none --------- Co-authored-by: eugeneswalker <eugenesunsetwalker@gmail.com>
2023-06-22py-pyproj: add v3.6.0 (#38399)Adam J. Stewart1-2/+2
2023-06-22py-networkx: add 3.1 (#38377)Manuela Kuhn1-19/+35
* py-networkx: add 3.1 * Update var/spack/repos/builtin/packages/py-networkx/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Add default variant --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-22opencascade: typo in `True` (#38487)Wouter Deconinck1-1/+1
Not sure why flake8 didn't catch this as an undefined name, e.g. https://www.flake8rules.com/rules/F823.html.
2023-06-22Add VecGeom 1.2.3 and mark old versions as deprecated (#38483)Seth R. Johnson1-21/+107
Co-authored-by: Ben Morgan <drbenmorgan@users.noreply.github.com>
2023-06-22add new package: daemonize (#38477)miheer vaidya1-0/+24
2023-06-22IQ-TREE: Add version 2.2.2.7 (#38481)Rémi Lacroix1-0/+1
2023-06-22celeritas: new version 0.3.0 (#38438)Seth R. Johnson1-1/+3
2023-06-22geant4: new version 11.1.2 (#38475)Wouter Deconinck1-0/+1
No changes required to the geant4 package.py file. Changes: https://gitlab.cern.ch/geant4/geant4/-/compare/v11.1.1...v11.1.2 Release notes: https://geant4.web.cern.ch/download/release-notes/notes-v11.1.2.txt Co-authored-by: Ben Morgan <drbenmorgan@users.noreply.github.com>
2023-06-22tests/py-chainer: convert to new stand-alone test process (#38365)Tamara Dahlgren1-22/+20
* tests/py-chainer: convert to new stand-alone test process * py-chainer: add skip_modules entry for onnx_chainer
2023-06-21py-pycairo: add 1.24.0 (#38503)Manuela Kuhn1-6/+10
* py-pycairo: add 1.24.0 * Change python dependency to 3.8 * Remove upper bound for python dependency * Update var/spack/repos/builtin/packages/py-pycairo/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-06-21tetranscripts: new package @2.2.3 (#38485)George Young1-0/+23
* tetranscripts: new package @2.2.3 * tidying up --------- Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
2023-06-21[tclap] Adds new versions to tclap package (#38508)Matthieu Dorier1-0/+3
2023-06-21darshan-runtime,darshan-util,py-darshan: add 3.4.3 releases (#38359)shanedsnyder3-13/+16
* add darshan 3.4.3 releases * darshan-runtime 3.4.3 * darshan-util 3.4.3 * py-darshan 3.4.3.0 - add py-humanize as new dependency * py-darshan has strict darshan-util version reqs darshan-util version required is based on the first 3 parts of the py-darshan version string * remove support for python3.6 * py-humanize dependency for 3.4.3+ versions * only enforce scipy dependency for 3.4.0.1 * drop optional lxml dependency * drop matplotlib pinning * importlib-resources not a dep in python-3.7+ * drop unnecessary numpy pin * add build dep for pytest-runner * fix typo in pytest-runner package name * pip setuptools to match pydarsan setup.py * spack style fix
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