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2023-03-16pmix, openmpi, and prrte need to use the same `configure` to find the same ↵Stephen Sachs2-0/+2
deps (#36105) * [openmpi] 5.0.0.rc10 onwards needs munge This is the error you will see when munge is missing from `PKG_CONFIG_PATH`: ``` configure:63942: checking for pmix pkg-config cflags configure:63956: check_package_pkgconfig_run_results=Package munge was not found in the pkg-config search path. Perhaps you should add the directory containing `munge.pc' to the PKG_CONFIG_PATH environment variable Package 'munge', required by 'pmix', not found configure:63959: $? = 1 configure:63966: pkg-config output: Package munge was not found in the pkg-config search path. Perhaps you should add the directory containing `munge.pc' to the PKG_CONFIG_PATH environment variable Package 'munge', required by 'pmix', not found configure:63972: result: error configure:63974: error: An error occurred retrieving pmix cppflags from pkg-config ``` * Use same PKG_CONFIG_PATH defaults for ompi+pmix+prrte The issue I tried to fix in https://github.com/spack/spack/pull/36105 comes from different default search paths in different `pkg-config` executables used in `openmpi` and `pmix` package. As these tools (`openmpi`, `pmix`, and `prrte`) all use the same mechanisms to detect dependencies, the `pkg-config` environment they use should also be equal.
2023-03-16libaio: Add version 0.3.113 (#36101)Rémi Lacroix1-0/+1
2023-03-16autodiff: new version 1.0.0 (#36121)Wouter Deconinck1-0/+1
No more https://0ver.org. No changes to build system since 0.6.12.
2023-03-16Ospray (#36128)Erik Heeren1-2/+5
* ospray: denoiser and GLM variants * ospray: denoiser defaults to True to preserve previous behaviour
2023-03-16openssl: New version 3.1.0 (#36166)Erik Schnetter1-0/+1
2023-03-16LAMMPS: add new versions (#35592)Richard Berger1-0/+9
* LAMMPS: add new stable version 20220623.3 * LAMMPS: add new patch version 20230208
2023-03-16meson: add 1.0.1 (#35987)Michael Kuhn1-0/+3
2023-03-16Modify info print of ESMF_CPP due to permission denied errors in spack on ↵Dom Heinzeller2-0/+15
MSU Hercules (#35969) * Skip info print of ESMF_CPP due to permission denied errors in spack on MSU Hercules * Better version of patch
2023-03-16reduce spec.json.sig file size (#36157)Harmen Stoppels1-1/+5
Since GPG clear-sign cannot deal with lines longer than 19995 characters and doesn't even error but simply truncates those linese (don't ask me why...), we have to be careful not to hit that line limit when reducing the filesize. So, instead this PR sets the indent level to 0 and drops the whitespace after `: `, which still reduces file size by 50% or so.
2023-03-16Windows: target arch based on spec target arch (#35797)John W. Parent3-5/+3
Update packages to check Spec's target rather than the host platform.
2023-03-16Include rocm-openmp-extras header and omp library (#36142)renjithravindrankannath1-9/+21
2023-03-16add rdkit for gninavis and remove mpi (#36117)Rocco Meli1-2/+4
2023-03-16slepc: add HPDDM wrappers (#36118)Pierre Jolivet2-1/+9
2023-03-16Revert "minify spec.json in buildcache (#36138)" (#36156)Harmen Stoppels1-1/+1
This reverts commit 1a8eefe09b034f8dda564e60b5b1905f53958aa2.
2023-03-16openfst: add v1.8.2 (#36143)Alec Scott1-0/+1
2023-03-16openal-soft: add v1.23.0 (#36144)Alec Scott1-0/+1
2023-03-16octave: add v8.1.0 (#36145)Alec Scott1-0/+1
2023-03-16nginx: add v1.23.3 (#36146)Alec Scott1-0/+1
2023-03-16netdata: add v1.38.1 (#36147)Alec Scott1-0/+1
2023-03-16mpdecimal: add v2.5.1 (#36149)Alec Scott1-0/+1
2023-03-16mpc: add v1.3.1 (#36150)Alec Scott1-0/+1
2023-03-16mosh: add v1.4.0 (#36151)Alec Scott1-0/+1
2023-03-16mkfontscale: add v1.2.2 (#36152)Alec Scott1-0/+1
2023-03-16erlang: add v25.3 (#36153)Alec Scott1-0/+1
2023-03-15qt-base: add qmake attribute (#36114)Adam J. Stewart2-1/+4
2023-03-15Hotfix: CI: Add CI target for gpu-test stack (#36136)kwryankrattiger1-0/+1
2023-03-15UCX: make version support level more realistic (#36127)Howard Pritchard1-2/+4
Per feedback from the UCX community, we rarely do update releases to anything but the current and one previous main release stream. Update comments in the UCX spack file to reflect this. Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-03-15minify spec.json in buildcache (#36138)Harmen Stoppels1-1/+1
saves about 50% of data, which is significant for hundreds of thousands of spec.json files in our buildcaches.
2023-03-15extrae: add v4.0.3 (#36059)Alec Scott1-0/+1
2023-03-15libpipeline: add v1.5.7 (#36068)Alec Scott1-0/+1
2023-03-15wrf: fix patches for aarch64 config (#35984)Annop Wongwathanarat5-28/+236
2023-03-15py-numpy: enable linking with armpl-gcc and acfl for BLAS and LAPACK (#35417)Annop Wongwathanarat1-5/+11
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-15julia: Some improvements to the package (#36054)Mosè Giordano1-6/+11
2023-03-15cardioid: fix homepage (#36099)Robert Blake1-1/+1
2023-03-15hpctoolkit: add branch 2023.03.stable (#36096)Mark W. Krentel1-0/+1
2023-03-15UCX: add 1.14.0 (#36098)Howard Pritchard1-0/+1
Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2023-03-15GDAL: add v3.6.3 (#36097)Adam J. Stewart1-0/+1
2023-03-14Remove leftover command from documentation (#36116)Shahzeb Siddiqui1-8/+3
The command refers to dotkit files, which are not supported since a long time.
2023-03-14py-pyshacl: patch dependency typo (#36084)Erik Heeren1-0/+4
* py-pyshacl: patch dependency typo * py-pyshacl: satisfy flake8 * Update var/spack/repos/builtin/packages/py-pyshacl/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-14Libogg and libtheora: build on windows (#35099)John W. Parent4-12/+176
Adds builders appropriate for building these packages on Windows. It is intended that builds on other platforms are unaffected (e.g. they build with Autotools as before on Linux).
2023-03-14Fix HDF5+mpi~fortran (#35400)Sajid Ali1-1/+3
* HDF5+mpi~fortran * fix style
2023-03-14libxfont: add v1.5.4 (#36072)Alec Scott1-0/+1
2023-03-14postgresql: fix typo (#36115)Harmen Stoppels1-1/+1
2023-03-14py-pint: new versions (#36102)Erik Heeren1-5/+10
* py-pint: new versions * Update var/spack/repos/builtin/packages/py-pint/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pint/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-pint/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2023-03-14gobject-introspection 1.7.2 also requires libffi@:3.3 (#35606)Gregory Lee1-1/+1
2023-03-14py-antspyx: new package (#30964)Matthias Wolf5-0/+144
* py-antspyx: new package Also adds required dependencies. Requires options to ITK to enable the right support libraries, and patches to remove tune the setup and provide resources rather than downloading libraries/"submodules" on the fly. * Fix patch URL * Style fixes. * bump version and re-include `git clone ...` as resource
2023-03-14environment.matching_spec: linear time traversal (#35534)Harmen Stoppels1-35/+37
... and use colors in disambiguate message for clarity. This commit avoids the loop: ``` for root in roots: for dep in deps(root): ... ``` instead it ensures each node is visited once and only once. Also adds a small optimization when searching for concrete specs, since we can assume uniqueness of dag hash, so it's fine to early exit.
2023-03-14go: add v1.20.2 and v1.19.7 (#36065)Alec Scott1-7/+36
2023-03-14pexsi: add v1.2 and v2.0 (#36049)Rocco Meli1-33/+61
2023-03-14makedepend: add v1.0.8 (#36078)Alec Scott1-0/+1