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2015-11-25fix for the shell arg handling issuesTom Scogland1-1/+7
The setup-env.sh script now saves off the argument array before shifting off all the arguments so that the final command invocation doesn't arbitrarily requote the arguments. All external quoting is preserved now. This has been thoroughly tested with zsh, but should probably be tested with bash etc. before acceptance.
2015-09-27Merge pull request #116 from mamelara/developTodd Gamblin4-0/+78
Added samtools bioinformatics software
2015-09-27Remove enabled variants from install prefix.Todd Gamblin1-6/+1
- these make the prefix too long in many cases. - users can figure out which install is which by querying.
2015-09-27Remove special characters (@, %, +, ~, etc) from stage nameTodd Gamblin1-2/+9
2015-09-24Adding bowtie2 package along with patchMario Melara2-0/+40
2015-09-23Added samtools bioinformatics softwareMario Melara2-0/+38
2015-09-23Merge pull request #102 from RasmusWL/features/fishTodd Gamblin1-0/+18
Add fish (shell) package
2015-09-23Merge pull request #106 from justintoo/add-package-doxygenTodd Gamblin1-0/+25
(Package) Add Doxygen (v1.8.10)
2015-09-23Merge pull request #110 from scalability-llnl/features/boostupdateTodd Gamblin1-0/+4
update boost package for new releases
2015-09-23Merge pull request #111 from scalability-llnl/features/protobufTodd Gamblin1-0/+16
add protobuf package
2015-09-23Merge pull request #112 from scalability-llnl/features/glogTodd Gamblin1-0/+15
add glog package
2015-09-23Merge pull request #113 from scalability-llnl/features/gflagsTodd Gamblin1-0/+21
add gflags package
2015-09-23Merge pull request #114 from scalability-llnl/features/snappyTodd Gamblin2-0/+44
Features/snappy
2015-09-23Merge pull request #115 from scalability-llnl/features/lmdbTodd Gamblin1-0/+39
add lmdb package
2015-09-22add lmdb packageAdam Moody1-0/+39
2015-09-22add leveldb packageAdam Moody1-0/+29
2015-09-21add snappy packageAdam Moody1-0/+15
2015-09-21add gflags packageAdam Moody1-0/+21
2015-09-21add glog packageAdam Moody1-0/+15
2015-09-21add protobuf packageAdam Moody1-0/+16
2015-09-11(Package) Add Doxygen (v1.8.10)Justin Too1-0/+25
2015-09-03Add fish (shell) packageRasmus Wriedt Larsen1-0/+18
2015-09-01update boostAdam Moody1-0/+4
2015-08-27Fix for GitHub #95Todd Gamblin1-3/+21
develop: compiler clang@unknown created for /usr/bin/clang-format https://github.com/scalability-llnl/spack/issues/95
2015-08-27Add elfutils.Todd Gamblin4-9/+35
2015-08-26Merge branch 'features/pidx' into developTodd Gamblin1-0/+21
2015-08-26Minor fix-ups for PIDXTodd Gamblin1-2/+5
2015-08-26Merge pull request #28 in SCALE/spack from bugfix/scipy to developTodd Gamblin6-3/+80
# By Gregory L. Lee # Via Gregory L. Lee * commit '2c3e7a6f87ef5f8b5ba154b5a8b7da7a119f4a67': added graphviz dependency and dysect variant to STAT added graphviz and dependencies use filter_file instead of patch added lapack and blas deps, fixed gfortran compiler dependency
2015-08-25added graphviz dependency and dysect variant to STATGregory L. Lee1-2/+9
2015-08-25added graphviz and dependenciesGregory L. Lee3-0/+55
2015-08-24use filter_file instead of patchGregory L. Lee2-13/+7
2015-08-17Initial version of PIDX packagePeer-Timo Bremer1-0/+18
2015-08-17added lapack and blas deps, fixed gfortran compiler dependencyGregory L. Lee3-0/+21
2015-08-14moved lapack package to netlib-lapackGregory L. Lee1-45/+0
2015-08-14updated blas and lapack packagesGregory L. Lee2-0/+65
2015-08-13Fix 2.6 incompatibilityTodd Gamblin1-4/+4
2015-08-13Add .mailmap fileTodd Gamblin1-0/+11
2015-08-13Merge pull request #92 from trws/flux-buildTodd Gamblin10-0/+199
pre-alpha flux build and requisite dependencies
2015-08-13Merge pull request #94 from alfredo-gimenez/dev-pandasTodd Gamblin6-4/+49
Fixed py-pandas package
2015-08-12Merge pull request #88 from trws/git_depth_attemptTodd Gamblin1-3/+12
adding a fallback on failure with git --depth
2015-08-12Merge pull request #87 from alfredo-gimenez/developTodd Gamblin2-0/+34
Added gui and cscope features to Vim package
2015-08-07Cscope vim variant depends on cscopeAlfredo Gimenez1-2/+4
2015-08-07Fixed py-pandas packageAlfredo Gimenez6-4/+49
2015-08-06Added cscope (dependency for vim+cscope)Alfredo Gimenez1-0/+17
2015-08-04Use absolute paths to spack compiler wrappers in CC/CXX/F77/FCTodd Gamblin1-4/+4
2015-08-03pre-alpha flux build and requisite dependenciesTom Scogland10-0/+199
NOTE: the ncurses package now installs *BOTH* versions, wide and non-wide character for compatibility with packages that require either one. It may be desirable for this to be an option in the future.
2015-08-01Merge pull request #91 from nolta/patch-1Todd Gamblin1-0/+2
add missing gmp dependency to mpfr package
2015-08-01add missing gmp dependency to mpfr packageMike Nolta1-0/+2
2015-07-29adding the bear compilation database generatorTom Scogland1-0/+17
2015-07-27adding a fallback on failure with git --depthTom Scogland1-3/+12
Certain remote protocols don't support the `--depth` option. Since this can't be checked by URL type or in any sane way locally, this version attempts to clone git repositories with the --depth option, and if that fails attempts the clone again without it.
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