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2020-04-27Add ShengBTE (#16154)asmaahassan901-0/+39
* Add ShengBTE Adding a new package; ShengBTE. I tried adding it a MakefilePackage, and use build_directory = 'Src', but it was as if the build_directory gets ignored and make complains about target not found. and using the make funtion here instead of os.system, I get errors that config.f90 is not found which is already available under Src as well. * more enhancmenets fix lint; use mkl spec; use build_directory variable * one more fix * Use Makefile template * Update var/spack/repos/builtin/packages/shengbte/package.py use mkl instead of intel-mkl as a dependency Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/shengbte/package.py update recipe as suggested by reviewer Co-Authored-By: Adam J. Stewart <ajstewart426@gmail.com> * enhance recipe remove white space; changes as suggested by reviewer Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2020-04-27python : fix SSL for older Python versions (#16217)Joseph Ciurej1-8/+40
* Fixed SSL pathing for older versions of Python (i.e. @:3.6.999). * Fixed an issue where the 'python~ssl' variant wasn't properly being respected. * Improved the '~ssl' patch by making it functional instead of diff-based (enables 3.X.Y patches). * Fixed comment formatting to satisfy 'flake8' style requirements.
2020-04-27elfutils: Add version 0.179 (#16334)Tim Haines1-1/+2
2020-04-27graphviz: add poppler support (#16331)Christoph Junghans2-2/+6
* graphviz: add poppler support * graphviz: actually needs poppler+glib * poopler: fix glib build, new version
2020-04-27hpcviewer: add version 2020.04 (#16332)Mark W. Krentel2-1/+12
* hpcviewer: add version 2020.04 * ibm-java: add version 8.0.6.7
2020-04-27cuDNN: Help dependents find libs/includes on Power arch (#16128)Brian Van Essen1-0/+5
On Power architectures cuDNN will install in a target directory. This sets cuDNN_ROOT to point to the subdirectory to help dependents use this install.
2020-04-27ecflow added version 4.12.0 (#16327)Amjad Kotobi1-0/+1
2020-04-27cmake added version 3.17.1 (#16326)Amjad Kotobi1-0/+1
2020-04-27update cctools to version 7.1.3 (#16324)Benjamin Tovar1-1/+2
2020-04-27Make mariadb provide mysql-client... (#16322)iarspider1-0/+1
... as well as mariadb. Needed for ROOT.
2020-04-27update podio version formatting (#16321)vvolkl1-4/+17
* update podio version formatting * [podio] formatting fixes
2020-04-27[dd4hep] url and other fixes (#16320)vvolkl2-2/+41
2020-04-27MODYLAS: New package (#16317)Toyohisa Kameyama3-0/+477
2020-04-27Add new package: stinger (#16316)darmac1-0/+26
2020-04-27Add new package: smartdenovo (#16310)darmac2-0/+59
2020-04-27tulip: added new package at v5.4.0 (#16319)Massimiliano Culpo1-0/+42
closes #3479 Co-authored-by: Kate Isaacs <kisaacs@cs.arizona.edu> Co-authored-by: Kate Isaacs <kisaacs@cs.arizona.edu>
2020-04-27singularity: better info re post-install step (#16311)George Hartzell1-1/+4
The singularity info should actually suggest where you might find the info about the post-install steps. Co-authored-by: george.hartzell <george.hartzell@sana.com>
2020-04-27xabclib: added package at v1.03 (#16271)Toyohisa Kameyama1-0/+60
2020-04-27spglib: added libs property (#16318)asmaahassan901-0/+5
2020-04-27votca-csg: Block gromacs@2020 and newer (#16315)Christoph Junghans1-1/+1
2020-04-27Improve the coverage of spack.relocate (#15654)Massimiliano Culpo3-76/+148
This PR introduces trivial refactoring in: - `get_existing_elf_rpaths` - `get_relative_elf_rpaths` - `get_normalized_elf_rpaths` - `set_placeholder` mainly to be more consistent with practices used in other parts of the code and to simplify functions locally. It also adds or reworks unit tests for these functions and extends their docstrings. Co-authored-by: Patrick Gartung <gartung@fnal.gov> Co-authored-by: Peter J. Scheibel <scheibel1@llnl.gov>
2020-04-26ppOpen-APPL/AMR-FDM: New package (#16199)Toyohisa Kameyama1-0/+62
* ppOpen-APPL/AMR-FDM: New package * separate build and install. * Fix description.
2020-04-26qt: fix macOS w/ AppleClang (mesa libs) (#16302)Axel Huebl1-1/+3
Building the `py-jupyter` stack on macOS with AppleClang breaks on the `py-qtconsole` -> `py-qtconsole` -> `qt +opengl` package build environment setup with: ``` ==> Error: AttributeError: Query of package 'mesa' for 'libs' failed ... ==> Error: Failed to install qt due to ChildError: AttributeError: Query of package 'mesa' for 'libs' failed ``` This tries to add more library targets build by `mesa` to avoid this.
2020-04-26libpciaccess: mirror (#16312)Axel Huebl1-2/+2
Support mirrors for libpciaccess downloads.
2020-04-26libbsd: mirror (#16313)Axel Huebl1-1/+4
Add a mirror for `libbsd` to improve fetch stability. libbsd.freedesktop.org sometimes failes in my nightly CI/CD scripts.
2020-04-26py-profilehooks (new package) (#16305)Axel Huebl1-0/+20
Adds the py-profilehooks package.
2020-04-26py-blosc (new package) (#16307)Axel Huebl1-0/+23
Add the py-blosc python package.
2020-04-26py-h5py: master (new version) (#16306)Axel Huebl1-0/+2
Add the `master` branch of h5py as a version.
2020-04-26PyTorch: disable XNNPACK build (#16304)Adam J. Stewart1-0/+5
2020-04-25LLVM lldb 10.0: Python Link Dependency (#16299)Axel Huebl1-2/+6
* LLVM: Python Dependency Effort to expose the linked python library when building LLVM. This might fix the forward propagation of libintl that comes with the static python library build on darwin. * LLDB Py: Remove Ignored Old Flags Changed in LLVM 10.0+
2020-04-25py-pyyaml: add new version and variant (#16301)Adam J. Stewart1-4/+18
2020-04-25libyaml: add new version (#16300)Adam J. Stewart1-1/+3
2020-04-25ucx : add version, modify variants (#16252)Sajid Ali1-1/+11
* fixes * remove extra newline
2020-04-25py-spacy: add new package (#16293)Adam J. Stewart1-0/+31
2020-04-25Version bump: jdk 14 (#15821)Jonathon Anderson1-0/+3
2020-04-24py-thinc: add new package (#16295)Adam J. Stewart1-0/+29
2020-04-24Improved the accuracy of the dependencies for the 'visit' package. (#16297)Joseph Ciurej1-4/+18
Added a fix for the 'visit' package when building variant '@3%gcc'.
2020-04-24py-preshed: add new package (#16292)Adam J. Stewart1-0/+18
2020-04-24py-srsly: add new package (#16294)Adam J. Stewart2-0/+41
2020-04-24py-wasabi: add new package (#16296)Adam J. Stewart1-0/+16
2020-04-24py-plac: add new package (#16291)Adam J. Stewart1-0/+16
2020-04-24py-nltk: add new package (#16290)Adam J. Stewart1-0/+23
2020-04-24py-murmurhash: add new package (#16289)Adam J. Stewart1-0/+16
2020-04-24py-cymem: add new package (#16288)Adam J. Stewart1-0/+16
2020-04-24py-catalogue: add new package (#16287)Adam J. Stewart1-0/+19
2020-04-24py-blis: add new package (#16286)Adam J. Stewart1-0/+18
2020-04-24py-wheel: add new version (#16285)Adam J. Stewart1-0/+1
2020-04-24py-tqdm: add new version (#16284)Adam J. Stewart1-1/+2
2020-04-24spack env: activate note (#16279)Axel Huebl1-0/+4
print a note on how to activate a newly created environment
2020-04-24Chainer: New Package. (#16251)Toyohisa Kameyama2-1/+39
* Chainer: New Package. * 1. Add maintainers. 2. fix dependency. 3. Add typing-extention@3.6.6 and fix version dependency. * afixed dependency. * remove python dependency for version 6.
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