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2024-10-03py-torchaudio: add support for CUDA 12.5+ (#46746)Adam J. Stewart1-1/+6
2024-10-03ambertools: new package (#42684)Daniel Beltrán2-1/+90
* new builtin package: ambertools * fixes for the style test * yet more changes for the style test * hope this is the last fix for the style test * netlib-xblas is a dependency, it needs a depends_on("m4", type="build") * ambertools: Add new setuptool dependency, limit python to <= 3.10 (does not build with 3.11+) --------- Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-10-03vep: new package (#44522)Teague Sterling1-0/+131
* Adding the perl-bio-db-bigfile package * Adding perl-bio-ensembl package * Adding perl-bio-ensembl-variation package * Adding the perl-bio-ensembl-funcgen package * Adding perl-bio-ensembl-io package * Fixing checksums * py-uvloop: add v3.8.14, v3.9.15, v3.10.3 and dependencies * rollback * Update package.py * Update package.py * vep: add v110,v111,v112 * Update package.py * Update package.py * Update package.py * Update package.py * Update package.py * Updating dependent package handling Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Updating dependent package handling Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Update package.py * Update package.py * Reverting variants Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Update package.py * Update package.py * Rename package.py to package.py * Update package.py * Update package.py * Update package.py * Fix variant installation and dependencies Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Styles Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Removing unneeded dependencies Signed-off-by: Teague Sterling <teaguesterling@gmail.com> --------- Signed-off-by: Teague Sterling <teaguesterling@gmail.com> Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
2024-10-03pika: remove git dependency (#46745)Mikael Simberg1-1/+0
2024-10-03hpcviewer: add version 2024.09 (#46744)Mark W. Krentel1-1/+7
2024-10-02ospray: add v3.2.0 (and dependencies) (#46676)Wouter Deconinck5-11/+25
2024-10-02py-pyproj: add v3.7.0 (#46690)Adam J. Stewart1-10/+16
2024-10-02py-jinja2: add v3.1.4 (fix CVE) (#46668)Wouter Deconinck1-2/+13
* py-jinja2: add v3.1.4 (fix CVE) * py-jinja2: fix py-flit-core upper limit * py-jinja2: url_for_version due to lowercase jinja2
2024-10-02dcmtk: add v3.6.8 (fix CVE) (#46627)Wouter Deconinck1-4/+5
* dcmtk: add v3.6.8 (fix CVE) * dcmtk: apply tiff patch to new version too * dmctk: tiff patch when range closed since in upstream master
2024-10-02style: fix black configuration (#46740)Todd Gamblin1-11/+2
We mostly use `spack style` and `spack style --fix`, but it's nice to also be able to run plain old `black .` in the repo. - [x] Fix includes and excludes `pyproject.toml` so that we *only* cover files we expect to be blackened. Note that `spack style` is still likely the better way to go, because it looks at `git status` and tells black to only check files that changed from `develop`. `black` with `pyproject.toml` won't do that. Of course, you can always manually specify which files you want blackened. Signed-off-by: Todd Gamblin <tgamblin@llnl.gov>
2024-10-03alpaka: add v0.9.0, v1.0.0, v1.1.0, v1.2.0 (#46607)Tapish Narwal1-23/+56
2024-10-03edm4hep: fix concretization by adding a when inside the conditional (#46710)Juan Miguel Carceller1-1/+1
2024-10-03yq: add v4.44.3, fix go dependency constraints (#46738)Alec Scott1-0/+5
2024-10-02mepo: add 2.1.0 (#46726)Matt Thompson1-0/+1
2024-10-02Add more ReFrame versions (#46706)Vasileios Karakasis1-0/+23
2024-10-03scc: add v3.4.0, drop generated dependencies (#46733)Alec Scott1-2/+3
2024-10-02MPICH: Add version 4.2.3 (#46718)Ken Raffenetti1-0/+1
2024-10-02hugo: add v0.135.0, switch to GoPackage (#46735)Alec Scott1-17/+27
2024-10-02lazygit: add v0.44.1 (#46736)Alec Scott1-1/+4
2024-10-02git: fix zsh shell completions (#46725)Alec Scott1-0/+5
2024-10-03glow: fix package to install completions and not source dir (#46728)Alec Scott1-5/+15
2024-10-02Do not fail noop jobs in Spack CI (#46713)kwryankrattiger1-1/+3
2024-10-02rclone: add v1.68.1, convert to a GoPackage (#46721)Alec Scott1-18/+7
* rclone: convert to a GoPackage * rclone: add v1.68.1
2024-10-02kubectl: add v1.31.1, convert to a GoPackage (#46722)Alec Scott1-9/+3
2024-10-02direnv: convert to GoPackage (#46724)Alec Scott1-14/+1
2024-10-02litestream: drop GoBuilder now that GoPackage is fixed (#46727)Alec Scott1-6/+4
2024-10-02restic: convert to GoPackage (#46719)Alec Scott1-14/+2
2024-10-02stdexec: Add nvhpc@24.09 version (#46714)Auriane R.1-0/+1
2024-10-02libuv-julia: Add v1.48.0 (#46705)Mosè Giordano1-0/+1
2024-10-02nghttp2: Add v1.59.0 (#46704)Mosè Giordano1-0/+1
2024-10-02fds: add 6.9.0,6.9.1 and openmp (#46717)kjrstory1-2/+9
* fds: add 6.9.0,6.9.1 and openmp * typo and style fix
2024-10-02build(deps): bump codecov/codecov-action from 4.5.0 to 4.6.0 (#46708)dependabot[bot]1-1/+1
Bumps [codecov/codecov-action](https://github.com/codecov/codecov-action) from 4.5.0 to 4.6.0. - [Release notes](https://github.com/codecov/codecov-action/releases) - [Changelog](https://github.com/codecov/codecov-action/blob/main/CHANGELOG.md) - [Commits](https://github.com/codecov/codecov-action/compare/e28ff129e5465c2c0dcc6f003fc735cb6ae0c673...b9fd7d16f6d7d1b5d2bec1a2887e65ceed900238) --- updated-dependencies: - dependency-name: codecov/codecov-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
2024-10-02py-rucio-clients: new package (and dependencies) (#46585)Wouter Deconinck16-7/+280
Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
2024-10-02fix 'command -v' not in csh (#45845)Ray Huang1-2/+2
2024-10-02ipopt: add 3.14.12 to 3.14.14, improve mumps integration (#46673)Alex Tyler Chapman2-8/+81
2024-10-02libblastrampoline: Add v5.9.0, v5.10.1, v5.11.0 (#46702)Mosè Giordano1-0/+3
2024-10-02 postgresql: Add icu4c dependency for versions 16+ (#46691)Arne Becker1-0/+5
* postgresql: Add icu4c dependency for versions 16+ * postgresql: make ICU an option * postgresql: ICU variant only needed for v16+ * postgresql: Check for negated option Check for negated option instead of negating the test Co-authored-by: Alec Scott <hi@alecbcs.com> --------- Co-authored-by: Alec Scott <hi@alecbcs.com>
2024-10-02aspell_dict: remove unused import (#46716)Harmen Stoppels1-1/+0
2024-10-02perl-bio-ensembl-variation: new package (#44507)Teague Sterling2-1/+89
* Adding the perl-bio-db-bigfile package * Adding perl-bio-ensembl-variation package * Adding perl-bio-ensembl-io package * Update package.py * Update package.py * Update package.py * Update package.py * Update package.py * Updating dependent package handling Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Updating dependent package handling Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Reverting variants Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Update package.py * Rename package.py to package.py * Update package.py * Update package.py * Update package.py * Fix variant installation and dependencies Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Styles Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Removing unneeded dependencies Signed-off-by: Teague Sterling <teaguesterling@gmail.com> * Update package.py * Update package.py * Update package.py * perl-bio-ensembl: update sha256 of 112 * perl-bio-ensembl-variation: add perl-bio-ensembl-funcgen@{vers} --------- Signed-off-by: Teague Sterling <teaguesterling@gmail.com> Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-10-02py-flash-attn: add v2.6.3 (#46487)Auriane R.1-4/+8
* [py-flash-attn] Add version 2.6.3 * Update dependencies according to the latest version * Add max_jobs environmental variable to avoid oom error --------- Co-authored-by: aurianer <8trash-can8@protonmail.ch>
2024-10-02dbus: fix url; add v1.14.10, v1.15.10 (meson); fix CVEs (#46625)Wouter Deconinck1-12/+41
2024-10-02cbqn: new package (#46603)Asher Mancinelli1-0/+62
2024-10-02gh: add shell completions (#46701)Alec Scott1-0/+16
2024-10-02GoPackage: fix attributes to allow for custom build_directory values (#46707)Alec Scott2-12/+28
2024-10-02goma: add v7.8.2 (#46696)Weston Ortiz1-0/+1
2024-10-02cuda: add conflict for aarch64 with gcc-13.2.0 and cuda@12.4 (#46694)Andrew W Elble1-0/+5
https://github.com/spack/spack/pull/39666#issuecomment-2377609263
2024-10-02kafka: add v2.13-3.7.1, v2.13-3.8.0, remove v2.13-3.7.0 (#46692)Matthieu Dorier1-1/+9
* kafka: added new versions * kafka: add back deprecated version * kafka: fixing style
2024-10-02Revert "`cc`: ensure that RPATHs passed to linker are unique" (#46712)Harmen Stoppels2-175/+136
* Revert "`cc`: ensure that RPATHs passed to linker are unique" This reverts commit 2613a14c43b11ab92181bdd7ba57cd5b99f128a8. * Revert "`cc`: simplify ordered list handling" This reverts commit a76a48c42e8d6657f9dcb0500bff574651f317d9.
2024-10-02py-django: add v5.0.9, v5.1.1 (fix CVEs) (#46671)Wouter Deconinck2-2/+7
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2024-10-02tests: fix wrong install name (#46711)Harmen Stoppels1-1/+1
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2025-03-23 19:10:48 +0000