summaryrefslogtreecommitdiff
AgeCommit message (Collapse)AuthorFilesLines
2022-03-28survey package: add versions 1.0.2/1.0.3; add tls model variant (#29375)Jim Galarowicz1-3/+16
2022-03-28ports-of-call: new version 1.1.0 (#29723)Richard Berger1-2/+2
Version 1.0.0 was uninstallable.
2022-03-28batchedblas: new package (#29028)FJ-NaokiMatsumura2-0/+52
2022-03-28gpi-space: add v22.03 (#29736)Max Zeyen1-0/+1
2022-03-28Adding NVIDIA HPC SDK 22.3 (#29737)Filippo Spiga1-0/+4
Co-authored-by: Filippo Spiga <fspiga@nvidia.com>
2022-03-28julia: add patch reverting llvm rpath changes (#29731)Harmen Stoppels2-0/+35
2022-03-28julia 1.6/1.7: constrain libgit2, libssh2 (#29728)Harmen Stoppels1-4/+8
2022-03-27py-torch: fix to build with fujitsu-ssl2 (#29283)FJ-NaokiMatsumura8-0/+544
* py-torch: fix build with fujitsu-ssl2 * fix to use fujitsu-ssl2 in py-torch v1.5.0 to v1.11.0 * fix to use fujitsu-ssl2 in py-torch v1.2.0 to v1.11.0 * Delete fj-ssl2.patch * renamed the patches * Rename fj-ssl2.1.5.patch to fj-ssl2_1.5.patch * Delete fj-ssl2_1.5.patch
2022-03-27mochi-thallium: new package (#29722)Matthieu Dorier1-0/+60
2022-03-27autotools doc: add missing right quote (#29734)百地 希留耶1-1/+1
2022-03-27h5z-zfp: fix build when ^hdf5+mpi (#29733)David M. Rogers1-3/+9
2022-03-27openmpi: switch to using main (#29725)Howard Pritchard1-8/+8
The Open MPI project has elected to name our development branch - main. Signed-off-by: Howard Pritchard <howardp@lanl.gov>
2022-03-26py-torchvision: adjust jpeg dependency (#29614)Glenn Johnson1-1/+1
2022-03-26llvm: add @14.0.0 (#29732)eugeneswalker1-0/+2
* llvm: add @14.0.0 * llvm@14 provides virtual
2022-03-25r-rsqlite: add v2.2.10 (#29624)Glenn Johnson1-0/+2
2022-03-25[julia] gfortran patch required for 1.7.2 (#29720)Jen Herting1-1/+1
2022-03-25Update rocm recipes for rocm-5.0.0 release (#29269)Sreenivasa Murthy Kolam48-109/+529
* update rocm recipes for ROCm-5.0.0 release * revert address sanitizer changes * fix style errors * update to the rocm recipes for 5.0.2 release * fix review comments inside the rocfft recipe * update the rocfft recipe for sqlite dependency
2022-03-25New package: ports-of-call (#29696)Richard Berger1-0/+35
2022-03-25Use the appropriate function to remove files in the stage directory (#29690)Massimiliano Culpo3-4/+29
We shouldn't be using "remove_linked_tree" to remove the lock file, since that function expects to receive a directory path as an argument. Also, as a further measure to avoid regression, this commit restores the "ignore_errors=True" argument on linux and adds a unit test checking that "remove_linked_tree" doesn't change file permissions as a side effect of a failure to remove.
2022-03-24Sherpa: add several new variants used by CMS (#29338)iarspider2-22/+85
2022-03-24vecgeom: fix install error when ~cuda (#29716)Valentin Volkl1-9/+11
2022-03-24PDC: add version 0.2 and branches (#29572)Jean Luca Bez1-1/+7
* Update package.py * Update package.py * Fixes on versions * Fix style * Remove code * Include latest version and removed code * Remove unecessary cmake dependency * Apply suggestions
2022-03-24environment.py: ensure view dir does not exist (#29641)Harmen Stoppels4-0/+101
2022-03-24Fix py-onnx-runtime recipe (#29646)iarspider2-11/+24
* Fix py-onnx-runtime recipe * Add missing dependencies * Update var/spack/repos/builtin/packages/py-cerberus/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update package.py * Better fix for py-onnx-runtime Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2022-03-24omega-h: add v10.1.0 from fork (#29528)Cameron Smith1-0/+1
* omegah: v10.1.0 this version is from the SCOREC fork of Omega_h * prefix version with scorec Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov> Co-authored-by: Seth R. Johnson <johnsonsr@ornl.gov>
2022-03-24add_files_to_view: flip incorrect default (#29700)Harmen Stoppels4-4/+4
2022-03-24environment.py: concrete root specs to view (#29634)Harmen Stoppels1-5/+6
Slight simplification of the code: just pass the list of concrete root specs to the view
2022-03-24fix --reuse w/ upstreams in env (#29680)Harmen Stoppels1-3/+5
2022-03-24environment views: single pass view generation (#29443)Harmen Stoppels14-25/+950
Reduces the number of stat calls to a bare minimum: - Single pass over src prefixes - Handle projection clashes in memory Symlinked directories in the src prefixes are now conditionally transformed into directories with symlinks in the dst dir. Notably `intel-mkl`, `cuda` and `qt` has top-level symlinked directories that previously resulted in empty directories in the view. We now avoid cycles and possible exponential blowup by only expanding symlinks that: - point to dirs deeper in the folder structure; - are a fixed depth of 2.
2022-03-24environment.py: clean up broken views on failure (#29643)Harmen Stoppels2-13/+46
When view creation fails for some reason, remove it, so that the next time around it can start from scratch.
2022-03-23Update py-numpy dependency on Python to avoid build failures (#29682)Ralf Gommers1-6/+6
2022-03-23py-cffi: add compiler flags to fix build with clang (#29679)Valentin Volkl1-0/+10
* py-cffi: add compiler flags to fix build with clang For %clang@13.0.1, this avoids the ``` clang-13: warning: optimization flag '-ffat-lto-objects' is not supported [-Wignored-optimization-argument] ``` warning being turned into an error, and fixes this link error: ``` build/temp.linux-x86_64-3.10/c/_cffi_backend.o: file not recognized: file format not recognized ``` * style
2022-03-23environment: be more defensive when deleting roots for old views (#29636)Harmen Stoppels2-2/+19
Currently `old_root` is computed by reading the symlink at `self.root`. We should be more defensive in removing it by checking that it is in the same directory as the new root. Otherwise, in the worst case, when someone runs `spack env create --with-view=./view -d .` and `view` already exists and is a symlink to `/`, Spack effectively runs `rm -rf /`.
2022-03-23tetgen: add v1.5.1 and v1.6.0 (#29630)Ce Qin1-1/+3
2022-03-23python: drop dependency on `file` for script check (#29513)Harmen Stoppels4-4/+55
`file` was used to detect Python scripts with shebangs, so that the interpreter could be changed from <python prefix> to <view path>. With this change, we detect shebangs using Python instead, so that `file` is no longer required.
2022-03-23kahip: add v3.12, v3.13 and v3.14 (#29648)Matthew Archer1-2/+13
Co-authored-by: cleathart <c.leathart@hotmail.co.uk>
2022-03-23variorum: update package for CCE (#29656)luker1-0/+5
CCE needs additional compiler flags.
2022-03-23libgit2: add versions 1.2.0, 1.3.0, 1.4.0, 1.4.1, 1.4.2, 1.4.3 (#29675)eugeneswalker1-0/+5
2022-03-23Use stable URLs and `?full_index=1` for all github patches (#29239)Adam J. Stewart64-217/+262
The number of commit characters in patch files fetched from GitHub can change, so we should use `full_index=1` to enforce full commit hashes (and a stable patch `sha256`). Similarly, URLs for branches like `master` don't give us stable patch files, because branches are moving targets. Use specific tags or commits for those. - [x] update all github patch URLs to use `full_index=1` - [x] don't use `master` or other branches for patches - [x] add an audit check and a test for `?full_index=1` Co-authored-by: Todd Gamblin <tgamblin@llnl.gov>
2022-03-23Remove known issues from documentation (#29664)Massimiliano Culpo2-78/+0
Known issues reports only 2 issues, among the bugs reported on GitHub. One of the two is also outdated, since the issue has been solved with the new concretizer. Thus, this commit removes the section.
2022-03-22ucx: add 1.12.1 (#29665)Carlos Bederián1-0/+1
2022-03-22sbang.py: single lstat (#29670)Harmen Stoppels1-11/+9
2022-03-22Feature/composed boost pkg deps p1 (#28959)Abhik Sarkar19-111/+22
* This commit removes the Boost.with_default_variants to variants that packages are precisely dependant upon. This is the first batch of 20 packages with modified boost dependencies. * Style fixes * Tested bridger: works for gcc-4.9.3 and gcc-8.3.1
2022-03-22New package: Vite (#29489)François Trahay1-0/+41
2022-03-22Windows PWSH setup fix (#29649)John W. Parent1-4/+4
A command in the script to make Spack accessible in PWSH was invoked with multiple arguments when it in fact requires a single argument.
2022-03-22libunwind: make v1.5.0 preferred (#29660)Massimiliano Culpo1-1/+1
Commit 26ff443 made the Gitlab pipeline failing on develop (while it was not failing in the original PR) due to errors in the fetcher. This change preserves the new versions, but will give some time for use to sync our tarball mirror for better reliability
2022-03-21e4s mini mac stack: add bzip2 (#29650)eugeneswalker1-0/+1
2022-03-21libunwind: add versions 1.6.2 and 1.6-stable (#29639)Mark W. Krentel1-4/+6
2022-03-21numactl: add explicit darwin conflict (#29481)Seth R. Johnson1-0/+3
2022-03-21Add conflicts/updates for HEP tools on Summit (#29556)Seth R. Johnson3-17/+16
* Fix bad `-mfma` flag on summit * ROOT: new version and ppc conflict See https://github.com/root-project/root/issues/9297