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2017-03-02test/packages: fixed test suite (#3236)Massimiliano Culpo1-106/+99
It seems the tests in `packages.py` were running just because we had a specific order of execution. This should fix the problem, and make the test_suite more resilient to running order.
2017-03-02fix build of 64bit PETSc and Trilinos in the same deal.II DAG (#3223)Denis Davydov3-9/+43
Declare that (i) Trilinos can be only built against 32bit Hypre (ii) SLEPc can not be built with Arpack when 64bit indices are used (iii) reflect those constraints in deal.II's depends_on While there, add extra release flags for best performance.
2017-03-02Updating SAMRAI package with new urls and new versions (#3188)Jon Rood1-24/+40
* Updating SAMRAI package file with new urls and new versions. Also using Spack's MPI compilers. * Using default optimization for Samrai and setting type to build for m4 dependency. * Adding debug variant to Samrai. * Converting Samrai to AutotoolsPackage.
2017-03-01add variant shared to yaml-cpp (#3254)healther1-0/+6
2017-03-01add package py-current (#3282)healther1-0/+36
2017-03-01Add xl and spectrum mpi support for mumps (#3231)eklee152-16/+118
* Add xl and spectrum mpi support for mumps * Incorporated Denis's comments. fPIC and if-else
2017-03-01Exclude a few packages to build with xl (#3270)eklee151-0/+8
2017-03-01add version 2.2.0 to package bear (#3278)healther1-0/+1
2017-03-01Add package: git-review (#3088)healther15-7/+451
* Add git-review * Fix flake8 errors * use PythonPackage for git-review * added dependencies for git-review * fix flake8 * moved url's to pypi.io based urls * fixed flake8... again * mostly url fixes, not tested, will do tomorrow * flake8 fix * changed URL for py-pysocks * Fixed URL for pysocks * fixed url
2017-03-01add packages vcsh (#3256)healther1-0/+44
* add packages vcsh * added git dependency * added comment regarding makefile
2017-03-01add package units (#3257)healther1-0/+36
* add package units * removed unnecessary dependency * readded python dependency
2017-03-01add package py-xmlrunner and fix unittest2 dependency (#3260)healther2-0/+38
* add package py-xmlrunner and fix unittest2 dependency * add setuptools dependency
2017-03-01add package py-symfit (#3264)healther2-1/+44
* add package py-symfit * added missing dependency * fixed ordering of versions
2017-03-01add package py-statsmodels and py-patsy (#3265)healther2-0/+92
* add package py-statsmodels and py-patsy * fixed typo * fixed urls * removed rc version
2017-03-01pip requires setuptools during runtime (#3272)Adam J. Stewart1-1/+4
2017-02-28added urls for Intel Parallel Studio (#3220)Gregory Lee1-38/+36
2017-02-28add package py-tqdm (#3262)healther1-0/+36
* add package py-tqdm * added py-setuptools dependency
2017-02-28xl support for suite-sparse (#3226)eklee151-8/+14
* xl support for suite-sparse * make_args.extend([ 'CFLAGS={0}'.format(self.compiler.pic_flag), 'FFLAGS={0}'.format(self.compiler.pic_flag) ])
2017-02-28Patch hypre to support ppc64le (#3238)eklee152-0/+15
- Patch applies through v2.11.1
2017-02-28add package py-tabulate (#3263)healther1-0/+36
* add package py-tabulate * added py-setuptools dependency
2017-02-28Update Adol-C to AutotoolsPackage; Change develop repository (#3246)Jean-Paul Pelteret1-23/+34
The new repository for the development version points to the most up-to-date official source for Adol-C. The previous SVN repository was only occasionally sync'd with this repository.
2017-02-28nfft distclean before configure patch (#3241)Thierry1-0/+3
2017-02-28add package py-sh (#3266)healther1-0/+37
* add package py-sh * removed constraint on py-setuptools
2017-02-28Fix infinite recursion in swig build (#3249)Adam J. Stewart1-4/+7
2017-02-28add sz package (#3251)Bryce Allen1-0/+48
2017-02-28add package py-saga-python and dependencies (#3267)healther4-0/+149
* add package py-saga-python and dependencies * fixed url and dependencies
2017-02-28add package py-attrs (#3253)healther1-0/+36
2017-02-28add py-ranger package (#3258)healther1-0/+37
2017-02-28add package py-xarray (#3259)healther1-0/+38
2017-02-28add version 0.29.0 to py-wheel (#3261)healther1-0/+1
2017-02-26numdiff: add 5.9.0 (#3243)Denis Davydov1-0/+1
2017-02-24Add py-mock version 2.0.0 (#3234)Eric Müller1-0/+1
2017-02-24Add bazel version 0.4.4 (#3233)Eric Müller1-0/+2
2017-02-23Fixing graphviz issue when calling spec (#3225)Javier1-0/+1
2017-02-22fix py-setuptools (#3217)Denis Davydov1-1/+3
2017-02-22Add SCOREC Core package for unstructured mesh simulations. (#3202)Pramod Kumbhar1-0/+59
* Add SCOREC Core package for unstructured mesh simulations.
2017-02-22Fix scotch build on bg-q (#3196)Pramod Kumbhar1-0/+9
* Fix build issue #3190 on bg-q : - disable parallel build as it produces weired linker errors in cross compiling environment - update ldflags for bg-q as per Makefile provided Makefile.inc.ppca2_ibm_bgq * Added note about -lpthread vs -pthread
2017-02-22Updating homepages and sources from two BSC packages (#3216)Kim Serradell2-6/+7
* Corrected extrae package homepage and url * Corrected paraver package homepage and url * To fix 'undefined reference to libintl_dgettext' appearing in extrae package when using binutils+libiberty * Adding support to previous paraver version and reverting binutils changes to open another PR
2017-02-22Convert Jaspert to AutotoolsPackage (#3212)Todd Gamblin1-12/+7
2017-02-21Boost modification for IBM xl compiler (#3205)eklee152-1/+794
Tested with: spack install boost@1.62.0+iostreams%xl_r^zlib%gcc^bzip2%gcc
2017-02-21Add packages: mosh (#3098)healther1-0/+45
* Add packages: mosh Perl is a run dependency. See https://github.com/mobile-shell/mosh/wiki/Build-Instructions
2017-02-21Fixing issue wheh overwriting build_args in PythonPackage (#3200)Javier1-1/+1
2017-02-21Fix malformed py-appdirs patch (#3203)Javier1-2/+2
2017-02-20Default to OpenSSL 1.0 (#3100)healther1-6/+5
* Added version 1.1 to openssl * restore note explaining preferred=True for 1.0.2k
2017-02-20parallel-netcdf: use spack_cc for sequential code instead of system gcc (#3143)Carlos Bederián1-0/+1
2017-02-20Fix setuptools bootstrapping now that dependencies are no longer vendored ↵Adam J. Stewart7-4/+154
(#3198) * Fix setuptools bootstrapping now that dependencies are no longer vendored * Reorder patch and comments * Use exact same patch as https://github.com/ActiveState/appdirs/pull/84 * Use exact same patch as https://sourceforge.net/p/pyparsing/patches/10/
2017-02-20Updating package: geant4 (#3197)Javier2-31/+113
2017-02-20Add MATLAB package (#2614)Adam J. Stewart1-0/+81
* Add MATLAB package * Remove auto-accept license feature
2017-02-20Fix tab completion of directories and filenames (#3184)Adam J. Stewart1-35/+11
2017-02-20Add installer for petsc4py and slepc4py (#3187)Barry Smith2-0/+76
* Add installer for petsc4py and slepc4py * @adamjstewart requested changes on this pull request; make these type=('build', 'run') * @citibeth suggestion Remove unneeded indirect dependencies
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