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* xrandr: needs xrandrproto
* xrandr: fix typo
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* ADIOS 1.13.1
ADIOS 1.13.1 fixes several issues with zero-sized block
reading and writing when compression transports are used.
* SZ 1.4.12.3
Add the lastest SZ release used in ADIOS1.
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* bcl2fastq2: package update
* package/bcl2fastq2: homepage fix
* package/bcl2fastq2: glob fix
* package/bcl2fastq2: code clean up
* package/bcl2fastq2: code clean up #2
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* bismark: Create new package
* bismark: fix dependency types
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* psmc: new package
* psmc: changed version number
* psmc: overwrite build phase
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* perl-statistics-pca: Create new package
* perl-statistics-pca: fix dependency types
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* r-s4vectors: package update
* r-s4vectors: dependencies fix
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* r-iranges: package update
* r-iranges: package update
* r-iranges: dependencies fix
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* r-genomicranges: package update
* r-genomicranges: dependencies fix
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* geopm: Added initial files for package geopm
and py-natsort dependency
* geopm: Updated variants for hwloc and mpi defaults
* geopm: Cleaned up unwanted hyphenation in description.
* geopm: updates according to change request.
* geopm: Updated minor change requests.
Clarification for ruby-ronn dependency included as a TODO.
This requires changes in the current configure and build process
which will be changed in a future version.
* geopm: changed to AutotoolsPackage and fixed hwloc
The changes for hwloc required to add a specific version bc of a
conflicting version of openmpi's hwloc dependency being below
1.99. This works but updates to this package should check if this
restriction is still required. (Thus TODO added)
* geopm: Added link dependencies (thanks for pointing this out).
Also removed empty line below class definition.
* geopm: Fixed depends_on according to package guide.
Removed wrong type 'run' and removed types for numactl, mpi and hwloc
to use default build & link type.
* geopm: Fixed and updated +doc dependencies
new pacakge ruby-ronn (package specified as in ruby-narray package)
Updated second +doc dependency doxygen.
* geopm: Changed args for Autotools specific feature.
Added enable_or_disable and with_or_without instead of if cascade.
Added overhead variant.
Also added missing dependency (default: build&link) for json-c).
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* glvis@3.3: new package
* mesa-glu: now provides 'glu' (GL Utility library)
* openglu: add package, provides glu
* [GLVis] Use MakefilePackage as base. Add 'develop' version.
Small tweaks in the makefile arguments.
* [GLVis] Locate the X11, GL and GLU libraries within their respective
prefixes. Set the C compiler in the makefile arguments.
* [GLVis] Fix a bug: the same variable was used for two different things.
* [libx11] Add the libs property
* [OpenGL] Add the libs property
* [OpenGLU] Add the libs property
* [GLVis] Use the libs properties of libx11, opengl, and openglu
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Activating a package that is already activated now sends a `tty.msg`
and returns.
```
-bash-4.2$ ~/spack/bin/spack activate aspell6-en
==> Package aspell6-en/lc4v24f is already activated.
```
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* Better error message for spack providers
fixes #1355
`spack providers` now outputs a sensible error message if non-virtual
specs are provided as arguments:
```
$ spack providers mpi zlib petsc
==> Error: non-virtual specs cannot be part of the query [zlib, petsc]
```
Formatting of the output changed slightly.
* Calling 'spack providers' without arguments print the virtual pkg list
Also, the error message in case of a wrong parameter has been improved
to show the list of valid packages.
* Avoid printing headers if stdout is not a tty
* The provider list is formatted with colify if not in a tty
* Added a test to check the list of providers returned from the command
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* r-htmltable: package update
* r-htmltable: dependency fix
* r-htmltable: dependency fix #2
* r-htmltable: dependency fix #3
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* r-limma: package update
* r-limma: dependency fix
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Change-Id: I6b597076b0740d65b8aeaebf95f459745b1b1503
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votca-moo is now part of votca-ctp (see votca/ctp#93)
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* eospac: initial commit
* eospac: add stable version
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This advises users to prefer `modules:` entries in `packages.yaml` on Cray.
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Popping the when spec from kwargs in the extends directive breaks
class inheritance. Inheriting classes do not find their when spec.
We now get the when spec from kwargs instead, leaving it to be found
by any downstream package classes.
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fixes #2095
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