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Co-authored-by: Michal Sudwoj <msudwoj@student.ethz.ch>
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* Rewrite relative dev_spec paths internally to absolute paths in case of relocation of the environment file
* Test relative paths for dev_path in environments
* Add a --keep-relative flag to spack env create
This ensures that relative paths of develop paths are not expanded to
absolute paths when initializing the environment in a different location
from the spack.yaml init file.
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* Propagate --test= for environments
* Improve help comment for spack concretize --test flag
* Add tests for --test with environments
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* py-aioitertools: New package
* py-aioitertools: Fixed python dependencies, and Fixed style of code
* switch to the source build
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Currently, regardless of a spec being concrete or not, we validate its variants in `spec_clauses` (part of `SpackSolverSetup`).
This PR skips the check if the spec is concrete.
The reason we want to do this is so that the solver setup class (really, `spec_clauses`) can be used for cases when we just want the logic statements / facts (is that what they are called?) and we don't need to re-validate an already concrete spec. We can't change existing concrete specs, and we have to be able to handle them *even if they violate constraints in the current spack*. This happens in practice if we are doing the validation for a spec produced by a different spack install.
Signed-off-by: vsoch <vsoch@users.noreply.github.com>
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* Update version to install py-s3fs
* Update the required version of py-urllib3, and Set the dependent conditions of py-docutils
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As of OpenBLAS 0.3.13, leaving off `TARGET` by default optimizes most
code for the host system -- adding flags that cause the resulting
library to fail (SIGILL) on older systems. This change should ensure
that a "x86_64" target for example will work across deployment systems.
https://github.com/xianyi/OpenBLAS/issues/3139
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This pull request will add the ability for a user to add a configuration argument on the fly, on the command line, e.g.,:
```bash
$ spack -c config:install_tree:root:/path/to/config.yaml -c packages:all:compiler:[gcc] list --help
```
The above command doesn't do anything (I'm just getting help for list) but you can imagine having another root of packages, and updating it on the fly for a command (something I'd like to do in the near future!)
I've moved the logic for config_add that used to be in spack/cmd/config.py into spack/config.py proper, and now both the main.py (where spack commands live) and spack/cmd/config.py use these functions. I only needed spack config add, so I didn't move the others. We can move the others if there are also needed in multiple places.
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* added h5py patch file for offline installs to work
* h5py v3+ deps consistent with setup.py, add patch
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Was getting the following error:
```
$ spack test list
==> Error: issubclass() arg 1 must be a class
```
This PR adds a check in `has_test_method` (in case it is re-used elsewhere such as #22097) and ensures a class is passed to the method from `spack test list`.
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Updated the versions for DiHydrogen and Aluminum. Added new constraints on versions of Aluminum that are used across the software stack. Cleaned up the dependency on DiHydrogen for LBANN.
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Co-authored-by: sbulut <sbulut@3vgeomatics.com>
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* py-chainer: Add test method for ChainerMN (continued #21848, #21940)
* py-chainer: Fixed the word in the message
* py-chainer: Delete unnecessary imports
* py-chainer: Incorporation of the measures pointed out in #21940 was insufficient.
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* mptensor: Add test method
* mptensor: Reverted the receipe on merged style
* mptensor: Changed """ to #
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* Added a smoke test for superlu-dist recipe
* Fixed small issues following a PR review
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Adds several EpetraExt_BUILD_* options as well as an Amesos2_ENABLE_Basker option. Adds `none` as an option to `gotype=`, which should be among the options since 'none' is specifically handled later in the package definition.
Adds `stokhos` and `trilinoscouplings` as options in spack which already are available in CMake for Trilinos (e.g. Trilinos_ENABLE_Stokhos:BOOL=)
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* py-pytest-html recipe
* added missing deps + copyright
* Update var/spack/repos/builtin/packages/py-pytest-html/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Update var/spack/repos/builtin/packages/py-pytest-metadata/package.py
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* Add newest versions of py-h5py
* Update dependencies for py-h5py
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Patch eospac's Makefile.-linux-gnu.hashes to consider only `$(notdir
$(F90))` when constructing a key to look up compiler flags in the
_F90-CPUINFO_COMP_FLAGS associative array.
This patch was accepted into eospac itself after the release of
6.4.2beta, so apply it only to 6.4.2beta and earlier releases.
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- Fix faulty patch
- Only use GEARSHIFFT_BACKEND_FFTW_PTHREADS if ~openmp
- Explicitly disable float16 support
- Use correct minimum required Boost version
- Add variants for Intel MKL and ROCm rocfft
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This is a workaround for an issue with how "spack install" is invoked from within "spack ci rebuild". The fact that we don't get an exception or even the actual returncode when using the object returned by spack.util.executable.which('spack') to install the target spec means we get no indication of failures about the install command itself. Instead we rely on the subsequent buildcache creation failure to fail the job.
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meson now only selectively strips rpaths but can still strip required
ones (like glib's pcre dependency).
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