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2024-01-22Add syntactic sugar for "strong preferences" and "conflicts" (#41832)Massimiliano Culpo6-115/+358
Currently requirements allow to express "strong preferences" and "conflicts" from configuration using a convoluted syntax: ```yaml packages: zlib-ng: require: # conflict on %clang - one_of: ["%clang", "@:"] # Strong preference for +shared - any_of: ["+shared", "@:"] ``` This PR adds syntactic sugar so that the same can be written as: ```yaml packages: zlib-ng: conflict: - "%clang" prefer: - "+shared" ``` Preferences written in this way are "stronger" that the ones documented at: - https://spack.readthedocs.io/en/latest/packages_yaml.html#package-preferences
2024-01-22environment.py: drop early exit in install (#42145)Harmen Stoppels2-57/+12
`spack install` early exit behavior was sometimes convenient, except that it had and has bugs: 1. prior bug: we didn't mark env roots of already installed specs as explicit in the db 2. current bug: `spack install --overwrite` is ignored So this PR simplifies by letting the installer do its thing even if everything is supposedly installed.
2024-01-22Revert "acfl: truncate version version number" (#42214)Annop Wongwathanarat1-4/+3
2024-01-22Bump up the version for ROCm-6.0.0 (#42026)renjithravindrankannath86-280/+13036
* Bump up the version for ROCm-6.0.0 * Adding patch files * Style check failure fix * Style check fixes * Style check error fixes * Patch to remove hipblas client file installation in 6.0 * Patch need to be applied on all 5.7 relases * 6.0 update for math libs and other packages, new github url etc * Correct package-audit failures * Correcting shasum for rocfft patch and limiting patch in rocblas * Reverting updates in rocprofiler-dev due to ci-gitlab failure * Fixes for ci-gitlab failure due to disabling hip backward compatibilit * Adding patch file to Change HIP_PLATFORM from HCC to AMD and NVCC to NVIDIA * Use the gcnArchName inplace of gcnArch as gcnArch is deprecated from rocm-6.0.0 * Patches to fix magma and blaspp build error with rocm 6.0.0 * Patch for mfem and arborx for rocm 6.0 * Style check error fix * Correcting style check errors * Uodating dependent version * Update for petsc to build with rocm 6.0 Need reverting-operator-mixup-fix-for-slate.patch for rocm 6.0 * Reverting the change in url for 2.7.4-rocm-enhanced * hip-tensor 6.0.0 update
2024-01-22gaudi: new version 37.2 (#42210)Wouter Deconinck1-0/+1
No major changes, https://gitlab.cern.ch/gaudi/Gaudi/-/compare/v37r1...v37r2?from_project_id=38&straight=false
2024-01-22py-keras: add v3.0.4, v3.0.3 (#42206)Adam J. Stewart1-2/+6
* py-keras: add v3.0.3 * py-keras: add v3.0.4
2024-01-22acts: new version 32.0.0 (#42207)Wouter Deconinck2-7/+15
* acts: new version 32.0.0 No major build system changes, see [diff](https://github.com/acts-project/acts/compare/v31.2.0...v32.0.0). Summary of changes: - updated actsvg version requirement - MLpack dependency removed as of 32.0.0 (https://github.com/acts-project/acts/pull/2863) * actsvg: new version 0.4.39 (new variant web) * [@spackbot] updating style on behalf of wdconinc --------- Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
2024-01-22dd4hep: new version 1.27.2 (#42211)Wouter Deconinck1-0/+1
New bugfix version, without any major changes, https://github.com/AIDASoft/DD4hep/compare/v01-27-01...v01-27-02.
2024-01-22CMakePackage pass python hints automatically (#42201)kwryankrattiger71-325/+111
This commit ensures that CMake packages that also have Python as a build/link dep get a couple defines for the Python path so that CMake's builtin `FindPython3`, `FindPython`, `FindPythonInterp` modules can locate Python correctly. The main problem with those CMake modules is that they first search for Python versions known at the time of release, meaning that old CMake maybe find older system Python 3.8 even though Python 3.11 comes first in `CMAKE_PREFIX_PATH` and `PATH`. Package maintainers can opt out of this by overriding the `find_python_hints = False` attribute in the package class.
2024-01-22repo.py: pass package name not fully qualified package name (#42217)Harmen Stoppels1-1/+1
2024-01-22py-nglview: add new package and dependency (py-versioneer-518) (#42079)Maciej Wójcik2-0/+44
* Add nglview package * Use slightly older version * py-nglview: Correct py-versioneer version Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * py-nglview: Correct version of py-jupyter-packaging dependency Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Add py-versioneer-518 package * py-versioneer-518: Correct version * py-nglview: Numpy is needed during build for the tests * py-nglview: dependency needed for tests * py-nglview: Correct dependency types --------- Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2024-01-21py-bluepyemodel: add newer versions (#42188)Matthias Wolf1-0/+4
* py-bluepyemodel: add newer versions * re-add license marker
2024-01-21py-nexusforge: add new version, fix dependencies (#42189)Matthias Wolf1-0/+3
2024-01-21snakemake: add new versions (#42074)Maciej Wójcik2-27/+62
* py-toposort: Add newer versions * snakemake: Add more recent versions with dependencies * Typo in copyright * Reorder dependencies, remove comments * Whitespace
2024-01-21py-tesorter: requires setuptools (#42124)snehring1-0/+2
2024-01-20e4s ci: use latest intel/hpckit 2024 based image (#41437)eugeneswalker2-32/+30
* e4s ci: use latest intel/hpckit 2024 based image * use latest container image: ecpe4s/ubuntu22.04-runner-amd64-oneapi-2024.0.0:2023.12.01 * comment out failing specs * update to use patched container * remove generalized package preference for intel-oneapi-mkl@2023 * change packages commented out
2024-01-20e4s ci: switch to neoverse_v2 target (#42115)eugeneswalker3-12/+23
2024-01-20[kokkos] make dpl dependence explicit (#42128)Robert Cohn0-0/+0
2024-01-21motif: patch to ensure main function (fixes #29594) (#42174)Wouter Deconinck2-0/+10
2024-01-20libtool: add build dep on findutils (#42199)Sam Grayson1-0/+6
2024-01-20py-scikit-learn: add v1.4.0 (#42186)Adam J. Stewart3-15/+47
2024-01-20libvterm: add v0.3.3 (#42203)Pranav Sivaraman1-0/+1
2024-01-20py-pyamg: fix deptypes (#42185)Adam J. Stewart1-4/+2
2024-01-19fzf: add v0.45.0 (#42175)Alec Scott1-0/+1
2024-01-19go: add v1.21.6 and v1.21.5 (#42177)Alec Scott1-1/+8
2024-01-19emacs: add v29.2 (#42178)Alec Scott1-0/+1
2024-01-19restic: add v0.16.3 (#42180)Alec Scott1-0/+1
2024-01-19ripgrep: add v14.1.0 (#42181)Alec Scott1-0/+1
2024-01-19py-rtree: add v1.2.0 (#42200)Adam J. Stewart1-0/+1
2024-01-19ROOT: fix macos build for 6.30 (#42198)Seth R. Johnson1-0/+6
2024-01-19test/cmd/checksum.py: avoid networking (#42190)Harmen Stoppels4-13/+64
2024-01-19Revert "cc: work around -v split between ld and ccld" (#42196)Harmen Stoppels2-11/+2
2024-01-19VecGeom: new version 1.2.7 and fix URLs (#42144)Seth R. Johnson2-9/+16
* VecGeom: new version 1.2.7 and fix URLs * vecgeom: remove deprecated ancient RC version with incorrect hash * geant4: remove support for @10.3+vecgeom
2024-01-19environment.py: remove symlinking of logs (#42148)Harmen Stoppels1-24/+0
The piece of code that is removed in this PR predates environment views. Spack would symlink build logs in `<env>/.spack-env/logs/*`, but this is redundant because: 1. Views already add `<prefix>/.spack` (and there's logic there to avoid clashes) 2. The code was broken anyways: it would only symlink the logs of environment roots, not their deps, even if they were just built. If users disable views, I'm pretty sure they're not waiting for `.spack-env/logs` either. So, imo we can delete this code, and it was probably overlooked in the past.
2024-01-19Typing for spack checksum code paths (#42183)Harmen Stoppels4-85/+79
2024-01-19btop: add v1.3.0, added GPU variant (#42139)Massimiliano Culpo2-2/+30
2024-01-19oci: use pickleable errors (#42160)Harmen Stoppels3-39/+33
2024-01-19Bugfix: spack config change handle string requirements (#42176)Peter Scheibel2-1/+17
For a requirement like ``` packages: foo: require: - "+debug" ``` (not `one_of:`, `any_of:`, or `spec:`) `spack config change` would ignore the string. This was particularly evident if toggling a variant for a previously unmentioned package: ``` $ spack config change packages:foo:require:+debug $ spack config change packages:foo:require:~debug ``` This fixes that and adds a test for it.
2024-01-18sqlite package: support Windows build (#41924)John W. Parent2-40/+96
Resubmission of #41761 with proper relocation of get_arch (taken from #41824). Co-authored-by: vsoch <vsochat@stanford.edu>
2024-01-18umpire - Use ENABLE_OPENMP to build with OpenMP support (#42164)Brian Han1-3/+1
2024-01-18qt: new version 5.15.12 (#42135)Wouter Deconinck1-0/+1
Qt5.15.12 (open source) was released on December 27, [release notes](https://code.qt.io/cgit/qt/qtreleasenotes.git/about/qt/5.15.12/release-note.md). No major build system changes expected.
2024-01-18thepeg: v2.3.0 hash change (#42167)Wouter Deconinck1-1/+1
``` $ curl 'https://thepeg.hepforge.org/downloads/?f=ThePEG-2.3.0.tar.bz2' | sha256sum % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 1904k 0 1904k 0 0 1075k 0 --:--:-- 0:00:01 --:--:-- 1074k ac35979ae89c29608ca92c156a49ff68aace7a5a12a0c92f0a01a833d2d34572 - ```
2024-01-18centrifuge: add new package (#42168)Christopher Christofi1-0/+21
* centrifuge: add new package * fix styling
2024-01-18Reduce the size on disk for logs (#42122)Harmen Stoppels8-84/+40
* Reduce the size on disk for logs This PR does two things: 1. Store a compressed `spack-build-out.txt.gz` 2. Get rid of phase logs, as they are duplicates of `spack-build-out.txt` The logs are not compressed in the stage dir, so on build failure the workflow for users is no different. It's just that on install the logs are rarely used, and if needed, users can easily `gzip -d` or `zgrep` them. In the case of GCC installs, the compressed logs are <5% of the original size, which is typically dozens of MBs. * get rid of "backwards compat" of file names in stage dirs
2024-01-18chai - make CUDA_SEPARABLE_COMPILATION flag optional (#42165)Brian Han1-2/+8
2024-01-18[embree] rely on spack to provide location of tbb (#42163)Robert Cohn1-1/+0
2024-01-18perl-graph: fix default version ordering to latest releases (#42161)Christopher Christofi1-1/+5
* perl-graph: fix default version ordering to latest releases * fix styling
2024-01-18libidn: adding new package libidn (#42170)snehring1-0/+24
2024-01-18Skip sbang hook on Windows (#42156)John W. Parent1-0/+2
Sbangs don't exist on Native Windows, and the hook is causing errors due to the file comparison + behavior of os.rename on Windows. Skip the hook on Windows.
2024-01-18ginkgo@1.7.0 %oneapi: patch sycl w changes from ginkgo pr #1524 (#42151)eugeneswalker2-0/+16
* ginkgo@1.7.0 %oneapi: patch sycl w changes from ginkgo pr #1524 * constrain patch to %oneapi@2024:
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