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* resolve: Add LUSOL variant and fix CMake variable definition.
* Update variant with correct version constraints.
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* added py-evodiff and dependencies
* deleted the FIXME
* fixed style issues
* added versions for biotite dependencies; added hash to py-hatch-vcs
* added python version for py-hatch-cython
* updated biotraj dependencies
* - added versions for the packages and dependencies
- added more dependencies for py-hatch
- added rust versions
- added py-uv as a new package
* updated pacakges and their dependencies according to the PR review by @meyersbs
* typo fix for hatchling version; fix the minimum required setuptools version for evodiff
* added 1.9.0 and 1.7.0 userpath versions; required as a dependency
* added mlflow as a dependency
* changed biopython to an optional dependency according to review from @meyersbs; variant esmfold
* Updated Specs
- Pinned biotraj to 1:1 for py-biotite
- Added numpy and other dependencies for py-biotraj; they are dependent
on the versions
- Excluded py-mlflow as a dependency for package py-evodiff; missing
usage in
package.
- Removed versioned dependencies from py-fair-esm
- Added a version to py-packaging
- Added py-setuptools as a dependency in py-userpath
- Added sha256 as hashes for py-uv
* style changes
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Co-authored-by: Wouter Deconinck <wdconinc@gmail.com>
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* Remove "modify_object_macholib"
According to documentation, this function is used when installing
Mach-O binaries on linux. The implementation seems questionable at
least, and the code seems to be never hit (Spack currently doesn't
support installing Mach-O binaries on linux).
* Fix relocation on macOS, when store projection changes
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Signed-off-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
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* [py-torchmetrics]
- Added variant
- deprecated version 1.3.0
* [py-torchmetrics]
- py-scipy@1.0.1:
- removed upper bounds on dependencies
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* py-cartopy: add v0.24.0
* py-owslib: add v0.31.0
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Enable tests for symlink-based views (this works with almost no
modifications to the view logic). View logic is not yet robust
for hardlink/junction-based views, so those are disabled for now
(both in the tests and as subcommands to `spack view`).
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* add new darshan-runtime variants
- `lustre` variant enables instrumentation of Lustre files
* requires Lustre headers, so Lustre is a proper dependency
for this variant
- `log_path` variant allows setting of a centralized log directory
for Darshan logs (commonly used for facility deployments)
* when this variant is used, the `DARSHAN_LOG_DIR_PATH` env var
is no longer used to set the log file path
- `group_readable_logs` variant sets Darshan log permissions to
allow reads from users in the same group
* add mmap_logs variant to enable usage of mmap logs
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for earlier versions (#46802)
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Also adds support for Paraview and CMake to build with Qt support on
Windows.
The remaining edits are to enable building of Qt itself on Windows:
* Several packages needed to update `.libs` to properly locate
libraries on Windows
* Qt needed a patch to allow it to build using a Python with a space
in the path
* Some Qt dependencies had not been ported to Windows yet
(e.g. `harfbuzz` and `lcms`)
This PR does not provide a sufficient GL for Qt to use Qt Quick2, as
such Qt Quick2 is disabled on the Windows platform by this PR.
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Co-authored-by: Dan Lipsa <dan.lipsa@kitware.com>
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* Bugfix/Installer: properly track task queueing
* Move ordinal() to llnl.string; change time to attempt
* Convert BuildTask to use kwargs (after pkg); convert STATUS_ to BuildStats enum
* BuildTask: instantiate with keyword only args after the request
* Installer: build request is required for initializing task
* Installer: only the initial BuildTask cannnot have status REMOVED
* Change queueing check
* ordinal(): simplify suffix determination [tgamblin]
* BuildStatus: ADDED -> QUEUED [becker33]
* BuildTask: clarify TypeError for 'installed' argument
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* update package py-pexpect
* add py-termgraph package
* add py-sphinx-click package
* add mdb package
* add py-sphinx-click maintainer
* add py-termgraph maintainer
* add py-pexpect license and maintainer
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* madgraph5amc: add v3.5.6, add a preferred version and remove urls
* Fix format
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Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
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Co-authored-by: jmcarcell <jmcarcell@users.noreply.github.com>
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Signed-off-by: Jonathon Anderson <anderson.jonathonm@gmail.com>
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* py-netcdf4: add v1.7
* [@spackbot] updating style on behalf of adamjstewart
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Co-authored-by: adamjstewart <adamjstewart@users.noreply.github.com>
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* libwmf: add v0.2.13; patch for missing limits.h
* libwmf: fix style
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Signed-off-by: Georgia Stuart <gstuart@umass.edu>
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(#46827)
* py-twisted: add v22.10.0, v24.7.0; deprecate older versions (fixes CVEs)
* py-incremental: add v24.7.2
* [@spackbot] updating style on behalf of wdconinc
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Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
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* cubature: Add new package
* cubature: formatting
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* php: add v7.4.33, v8.3.12
* php: mv sbang.patch sbang-7.patch
* php: add sbang-8.patch
* [@spackbot] updating style on behalf of wdconinc
* Replace --with-libiconv= (not recognized) with --with-iconv=
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Co-authored-by: wdconinc <wdconinc@users.noreply.github.com>
Co-authored-by: Bernhard Kaindl <contact@bernhard.kaindl.dev>
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Update preferred package to SLEEF 3.7
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