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2021-10-01py-gsutil: add v5.2 (#26337)bernhardkaindl1-0/+1
2021-10-01ArborX: add v1.1 (#26344)Daniel Arndt1-1/+3
2021-10-01otf: Explicitly disable MPI and ZOIDFS (#26346)Michael Kuhn1-0/+2
Otherwise, global installations of MPI could be picked up by OTF.
2021-10-01damask-grid, damask-mesh: fix spack install --test=root (#26350)bernhardkaindl2-8/+6
2021-10-01mpibind: add v0.7.0 and new flux variant (#26359)Edgar Leon1-0/+14
2021-10-01 LWGRP: add v1.0.4 DTCMP: add v1.1.2 and v1.1.3 (#26362)Adam Moody2-0/+3
2021-10-01petsc,py-petsc4py add versions 3.15.5, 3.16.0 (#26375)Satish Balay2-0/+5
2021-10-01med: work around "could not find TARGET hdf5" error (#25312)Christoph Conrads2-0/+17
Fixes #24671, fixes #26051
2021-10-01ns-3-dev: add v3.31, v3.32, v3.33, and v3.34 (#26383)Ryan Mast1-0/+4
2021-10-01STRUMPACK: add v6.0.0 (#26386)Pieter Ghysels1-5/+11
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2021-10-01py-pyface: add v7.3.0 (#26389)Manuela Kuhn1-9/+26
2021-10-01py-ipywidgets: add 7.6.5 and get sources from pypi (#26393)Manuela Kuhn1-5/+10
2021-10-01Python Globus SDK (globus.org): add new package (#26395)Mihael Hategan1-0/+22
2021-10-01py-pyside: restrict version of dependency on v1.2.2 (#26396)bernhardkaindl1-1/+2
Restrict @:1.2.2 to older sphinx versions to not fail the build
2021-10-01py-pyvista: add new package (#26398)Manuela Kuhn1-0/+27
2021-10-01Add oneAPI packages from 2021.4 release (#26401)Anna Masalskaya13-0/+66
2021-10-01SLEPc: add v3.16 (#26403)Jose E. Roman1-1/+3
2021-10-01py-fury: add new package (#26404)Manuela Kuhn1-0/+39
2021-10-01bootstrapping: improve error messages (#26399)Harmen Stoppels2-8/+26
2021-10-01boost: @1.77.0: need updated python_jam.patch for +python (#26363)bernhardkaindl2-2/+45
One hunk changed and the new patch is refreshed using quilt.
2021-09-30Add info command tests to increase coverage (#26127)Tamara Dahlgren1-0/+16
2021-09-30py-setuptools-rust: remove checksum url workaround (#25843)Tamara Dahlgren1-11/+2
2021-09-30Replace spec-related install_test asserts with exceptions; added unit tests ↵Tamara Dahlgren2-6/+57
(#25982)
2021-10-01py-shiboken2: add new package (#26390)Manuela Kuhn1-0/+35
2021-10-01vtk: fix install path to lib (#26387)Manuela Kuhn1-0/+4
2021-10-01New package: slurm-drmaa (#25424)Paul Spencer1-0/+42
Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2021-10-01py-jupyterlab: add new package (#26357)Manuela Kuhn1-0/+20
2021-09-30ArchSpec: minor cleanup of a few methods (#26376)Massimiliano Culpo1-51/+26
* Remove vestigial code to be compatible with Spack v0.9.X * ArchSpec: reworked __repr__ to be more adherent to common Python idioms * ArchSpec: simplified __init__.py and copy()
2021-09-30GDB: Fix for GMP and Python (#26366)Robert Underwood1-8/+22
closes #26354 and #26358 Previously we did not pass paths for GDB or GMP and ./configure would get confused about which one to pull from. Be more specific. Built with all variants enabled and fixed the fixable versions and variants: @:8.1 were fixable by limiting python versions for these to @:3.6. 7.10.1 and 7.11(.1) were fixable to build with glibc-2.25 and newer using two long patches. gdb 7.8 and 7.9 weren't fixable as there is no backport if the fix to build these with glibc-2.25 and newer: http://lists.busybox.net/pipermail/buildroot/2017-March/188055.html Co-authored-by: Bernhard Kaindl <bernhardkaindl7@gmail.com>
2021-09-30Build container images on Github Actions and push to multiple registries ↵Massimiliano Culpo7-39/+51
(#26247) Modifications: - Modify the workflow to build container images without pushing when the workflow file itself is modified - Strip the leading ghcr.io/spack/ from env.container env.versioned to prepare pushing to multiple registries - Fixed CentOS 7 and Amazon Linux builds - Login and push to Docker Hub as well as Github Action - Add a badge to README.md with the status of docker images
2021-09-30[py-tabulate] added version 0.8.9 (#25974)Jen Herting1-0/+1
2021-09-30rocsolver: Tighten rocsolver package dependencies (#25917)Cory Bloor1-10/+5
- Specify CMake minimum version more precisely - Ensure rocBLAS is available at build time - Limit workaround for missing rocblas include path to the only affected version (4.1.0) - Make hip a build and link dependency - Remove hip's link dependencies Co-authored-by: Harmen Stoppels <harmenstoppels@gmail.com>
2021-09-30sz: fix for external python sitelib (#26067)Robert Underwood1-0/+1
fixes #25973
2021-09-30gromacs-chain-coordinate: Fix calling the test suite (#26367)bernhardkaindl1-0/+8
2021-09-30match .spack literal, not as a regex (#26374)Harmen Stoppels3-5/+6
2021-09-30Disable __skip_rocmclang again (#26187)Harmen Stoppels19-19/+19
CMake 3.21.3 disables the broken hipcc-as-rocmclang detection again. From the release notes: > The AMD ROCm Platform hipcc compiler was identifed by CMake 3.21.0 > through 3.21.2 as a distinct compiler with id ROCMClang. This has been > removed because it caused regressions. Instead: > * hipcc may no longer be used as a HIP compiler because it interferes > with flags CMake needs to pass to Clang. Use Clang directly. > * hipcc may once again be used as a CXX compiler, and is treated as > whatever compiler it selects underneath, as CMake 3.20 and below > did.
2021-09-30Add a conflict for patchelf to catch errors earlier in bootstrapping (#26373)Harmen Stoppels1-0/+2
2021-09-30Bump version from v0.16.2 to v0.16.3 (#26372)Harmen Stoppels1-1/+1
2021-09-30dos2unix: new version 7.4.2 and enforce link with gettext (#26371)Olivier Cessenat1-0/+11
2021-09-30Move gnuconfig under the spack org (#26370)Harmen Stoppels1-3/+3
2021-09-30Added OpenJDK 17, 11 for Darwin, and set preferred to 11 (#26368)Diego Alvarez1-2/+13
2021-09-30gromacs-chain-coordinate: new package (#25426)Maciej Wójcik1-0/+79
2021-09-29Add e4s tags (#23382)Shahzeb Siddiqui94-16/+161
Add 'e4s' tags for all packages according to https://github.com/E4S-Project/e4s/blob/master/E4S_Products.md
2021-09-29linux-pam: include more official (recent) releases (#26065)acastanedam1-1/+5
2021-09-30Move new CUDA conflicts inside when('~allow-unsupported-compilers') block ↵David Beckingsale1-22/+21
(#26132) * Move new CUDA conflicts inside when('~allow-unsupported-compilers') block Co-authored-by: Axel Huebl <axel.huebl@plasma.ninja>
2021-09-29py-snappy: add patch to fix dependencies (#26352)Valentin Volkl2-0/+16
* py-snappy: add patch to fix dependencies * Update var/spack/repos/builtin/packages/py-snappy/req.patch Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-09-29py-jupyterlab: add 3.0.14, 3.0.18 and 3.1.14 (#26339)Manuela Kuhn1-1/+4
2021-09-29geos: fix patch versions (#26351)Valentin Volkl1-1/+1
2021-09-29py-jupyter-packaging: add 0.7.12 and 0.10.6 (#26338)Manuela Kuhn1-3/+7
* py-jupyter-packaging: add 0.7.12 and 0.10.6 * Update var/spack/repos/builtin/packages/py-jupyter-packaging/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> * Update var/spack/repos/builtin/packages/py-jupyter-packaging/package.py Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com> Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
2021-09-29cray-mvapich2: add a package to support (#26273)Howard Pritchard1-0/+59
The format of the HPE/Cray supplied module for cray-mvapich2 on HPE apollo systems is very different from the cray-mpich module supplied on Cray EX and XE systems. Recent changes to the cray-mpich package - https://github.com/spack/spack/pull/23470 broke support for cray-mvapich2 and relies now on the structure of the cray-mpich module to work properly. Rather than try to support two very different vendor mpich modules using the same spack package, just add another one specialized for the cray-mvapich2 module. Signed-off-by: Howard Pritchard <hppritcha@gmail.com>