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This commit adds some changes which improve use of Spack-installed
oneAPI packages with Spack-generated modules, but not within Spack
(e.g. if you install some of these packages with Spack, then load
their associated modules to build other packages outside of Spack).
The majority of the PR diff is refactoring. The functional changes
are:
* intel-oneapi-mkl:
* setup_run_environment: update Intel compiler flags to RPATH the
mkl libs
* intel-oneapi-compilers: update the compiler configuration to RPATH
libraries installed by this package (note that Spack already handled
this when installing dependent packages with Spack, but this is
specifically to use the intel-oneapi-compilers package outside
of Spack). Specifically:
* inject_rpaths: this modifies the binaries installed as part of
the intel-oneapi-compilers package to RPATH libraries provided
by this package
* extend_config_flags: this instructs the compiler executables
provided by this package to RPATH those same libraries
Refactoring includes:
* intel-oneapi-compilers: in addition to the functional changes,
a large portion of this diff is reorganizing the creation of
resources/archives downloaded for the install
* The base oneAPI package renamed component_path, so several packages
changed as a result:
* intel-oneapi-dpl
* intel-oneapi-dnn
* extrae
* intel-oneapi-mpi:
* Perform file filtering in one pass rather than two
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* feynhiggs: add new package
* Update var/spack/repos/builtin/packages/feynhiggs/package.py
* Update var/spack/repos/builtin/packages/feynhiggs/package.py
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Allow `spack external find` (with no extra args) to proceed if the manifest file exists but
without sufficient permissions; in that case, print a warning. Also add a test for that behavior.
TODOs:
- [x] continue past any exception raised during manifest parsing as part of `spack external find`,
except for CTRL-C (and other errors that indicate immediate program termination)
- [x] Semi-unrelated but came up when discussing this with the user who reported this issue to
me: the manifest parser now accepts older schemas
See: https://github.com/spack/spack/issues/31191
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Co-authored-by: Mark Olesen <Mark.Olesen@esi-group.com>
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Co-authored-by: Pariksheet Nanda <pnanda@necrosis.micro.med.umich.edu>
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Co-authored-by: Sayef Azad Sakin <ssakin@moonshot.cels.anl.gov>
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Follow-up from #31170
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nvc doesn't know this flag: `-Wno-unknown-pragmas`, it doesn't hurt to
remove the specific warning flags, from:
```
-O3 -Wall -Wextra -Wno-unknown-pragmas -Wcast-qual
```
to:
```
-O3 -Wall
```
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(#31226)
fixes #30997
Instead of giving a penalty of 30 to all nodes when preferences
are not package specific, give a penalty of 100 to all targets
of a node where we have package specific preferences, if the target
is not explicitly preferred.
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* py-instrain: adding new package
* py-instrain: fixed style
* removed unnecessary setuptools and numba version restrictions
* fixed pandas version
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* hadoop-xrootd: Add clang conflict
* Flake8
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
Co-authored-by: Tamara Dahlgren <35777542+tldahlgren@users.noreply.github.com>
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* charliecloud: custom autoreconf and require py-pip and py-wheel for master
* charliecloud: add 0.27
* charliecloud: add minimum py-pip version
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* gromacs: add recent version
* gromacs-swaxs: add recent versions
* gromacs-chain-coordinate: add recent version
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https://github.com/lammps/lammps/pull/3311
Co-authored-by: Stephen Sachs <stesachs@amazon.com>
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* Add the rocm tag to packages from the Radeon Open Compute Platform.
* Added more packages from the ROCm software distribution based on
reviewer feedback.
* Updated tags based on reviewer feedback
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This is an an alternative to mpiname.
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Older versions have compile errors under newer compilers (e.g., gcc-12).
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time error. (#31221)
Co-authored-by: Nicholas Cameron Sly <sly1@rzalastor2.llnl.gov>
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* add first version of py-pyrr package
* added license
* update license HEADER
* Remove preferred as there is only one version available
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* Better specify dependency type
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
* remove useless variable license
Co-authored-by: Jérôme Dubois <jerome.dubois@cea.fr>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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* Add missing '?full_index=1' to meson 9850.patch URL
* Correct checksum
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
Co-authored-by: Massimiliano Culpo <massimiliano.culpo@gmail.com>
Co-authored-by: Adam J. Stewart <ajstewart426@gmail.com>
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Signed-off-by: Howard Pritchard <howardp@lanl.gov>
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fixes #31139
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